Impact of oil on bacterial community structure in bioturbated sediments

Oil spills threaten coastlines where biological processes supply essential ecosystem services. Therefore, it is crucial to understand how oil influences the microbial communities in sediments that play key roles in ecosystem functioning. Ecosystems such as sediments are characterized by intensive bioturbation due to burrowing macrofauna that may modify the microbial metabolisms. It is thus essential to consider the bioturbation when determining the impact of oil on microbial communities. In this study, an experimental laboratory device maintaining pristine collected mudflat sediments in microcosms closer to true environmental conditions - with tidal cycles and natural seawater - was used to simulate an oil spill under bioturbation conditions. Different conditions were applied to the microcosms including an addition of: standardized oil (Blend Arabian Light crude oil, 25.6 mg.g21 wet sediment), the common burrowing organism Hediste (Nereis) diversicolor and both the oil and H. diversicolor. The addition of H. diversicolor and its associated bioturbation did not affect the removal of petroleum hydrocarbons. After 270 days, 60% of hydrocarbons had been removed in all microcosms irrespective of the H. diversicolor addition. However, 16S-rRNA gene and 16S-cDNA T-RFLP and RT-PCR-amplicon libraries analysis showed an effect of the condition on the bacterial community structure, composition, and dynamics, supported by PerMANOVA analysis. The 16S-cDNA libraries from microcosms where H. diversicolor was added (oiled and un-oiled) showed a marked dominance of sequences related to Gammaproteobacteria. However, in the oiled-library sequences associated to Deltaproteobacteria and Bacteroidetes were also highly represented. The 16S-cDNA libraries from oiled-microcosms (with and without H. diversicolor addition) revealed two distinct microbial communities characterized by different phylotypes associated to known hydrocarbonoclastic bacteria and dominated by Gammaproteobacteria and Deltaproteobacteria. In the oiled-microcosms, the addition of H. diversicolor reduced the phylotype-richness, sequences associated to Actinobacteria, Firmicutes and Plantomycetes were not detected. These observations highlight the influence of the bioturbation on the bacterial community structure without affecting the biodegradation capacities

Influence of a reduced-starch diet with or without exogenous amylase on lactation performance by dairy cows

The objective of this trial was to determine lactation performance responses in high-producing dairy cows to a reduced-starch versus a normal-starch diet and to the addition of exogenous amylase to the reduced-starch diet. Forty-five multiparous Holstein cows, 68 +/- 29 d in milk and 696 +/- 62 kg of body weight (BW) at trial initiation, were randomly assigned to 1 of 3 treatments in a completely randomized design; a 2-wk covariate adjustment period with cows fed the normal-starch diet was followed by a 10-wk treatment period with cows fed their assigned treatment diets. The normal-starch total mixed ration did not contain exogenous amylase (NS-). The reduced-starch diets, formulated by partially replacing corn grain and soybean meal with whole cottonseed and wheat middlings, were fed without (RS-) and with (RS+) exogenous amylase addition to the total mixed ration. All diets contained 50% forage and 19.8% forage neutral detergent fiber (dry matter basis). Starch and neutral detergent fiber concentrations averaged 27.0 and 30.9%, 22.1 and 35.0%, and 21.2 and 35.3% (dry matter basis) for the NS-, RS-, and RS+ diets, respectively. Expressed as a percentage of BW, dry matter intake was greater for cows fed RS- than for cows fed NS- or RS+. Intake of neutral detergent fiber ranged from 1.09 to 1.30% of BW among the treatments, with that of RS- being 21% greater than that of NS-. Milk yield tended to be greater for cows fed NS- compared with the RS diets. Milk fat content and yield were unaffected by treatment. Milk protein content and yield were greater for cows fed NS- compared with the RS diets. Concentrations of milk urea nitrogen were greater for cows fed RS diets compared with the NS- diet. Body weight, BW change, and body condition score were unaffected by treatment. Feed conversion (kg of milk/kg of dry matter intake) was 10% greater on average for cows fed NS- than for cows fed the RS diets, and tended to be 6% greater for cows fed RS+ compared with RS-. Feeding a reduced-starch diet formulated by partially replacing corn grain and soybean meal with a wheat middlings and whole cottonseed mixture compared with a normal-starch diet without addition of exogenous amylase to either diet reduced milk and component-corrected feed conversions. Addition of exogenous amylase to a reduced-starch diet was of minimal benefit in this study.Dutch State Mines (Heerlen, the Netherlands)Institute for Clinical and Translational Research, University of Wisconsin, Madiso

Type of corn endosperm influences nutrient digestibility in lactating dairy cows

An experiment was conducted to evaluate the effect of type of corn endosperm on nutrient digestibility in lactating dairy cows. Near-isogenic variants of an Oh43 x W64A normal dent endosperm hybrid carrying floury-2 or opaque-2 alleles were grown in spatial isolation in field plots and harvested as dry shelled corn. Six ruminally cannulated, multiparous Holstein cows (67 +/- 9 d in milk at trial initiation) were randomly assigned to a replicated 3 x 3 Latin square design with 14-d periods; the first 11 d of each period were for diet adaptation followed by 3 d of sampling and data collection. Treatment diets that contained dry rolled vitreous-, floury-, or opaque-endosperm corn [33% of dry matter (DM)], alfalfa silage (55% of DM) and protein-mineral-vitamin supplement (12% of DM) were fed as a total mixed ration. The percentage vitreous endosperm was zero for floury and opaque endosperm corns and 64 +/- 7% for the vitreous corn. Prolamin protein content of floury and opaque endosperm corns was 30% of the content found in vitreous corn. Degree of starch access and in vitro ruminal starch digestibility measurements were 32 and 42% greater on average, respectively, for floury and opaque endosperm corns than for vitreous corn. Dry matter and starch disappearances after 8-h ruminal in situ incubations were, on average, 24 and 32 percentage units greater, respectively, for floury and opaque endosperm corns than for vitreous corn. Ruminal pH and acetate molar percentage were lower, propionate molar percentage was greater, and acetate: propionate ratio was lower for cows fed diets containing floury and opaque endosperm corns than for cows fed vitreous corn. In agreement with laboratory and in situ measurements, total-tract starch digestibility was 6.3 percentage units greater, on average, for cows fed diets containing floury and opaque endosperm corns than vitreous corn. Conversely, apparent total-tract neutral detergent fiber (NDF) digestibility was lower for cows fed diets containing floury and opaque endosperm corns compared with vitreous corn. The type of endosperm in corn fed to dairy cows can have a marked effect on digestion of starch and NDF. Feeding less vitreous corn increased starch digestion but decreased NDF digestion

Hepatic pyruvate carboxylase expression differed prior to hyperketonemia onset in transition dairy cows.

Fatty acids (FA) provide an energy source to the liver during negative energy balance; however, when FA influx is excessive, FA can be stored as liver lipids or incompletely oxidized to β-hydroxybutyrate (BHB). The objectives of this study were to quantify plasma and liver FA profiles and hepatic gene expression in cows diagnosed with hyperketonemia (HYK; BHB ≥ 1.2 mM) or not (nonHYK; BHB < 1.2 mM) to determine a relationship between FA profile and expression of hepatic genes related to oxidation and gluconeogenesis. Production parameters, blood samples (-28, -3, 1, 3, 5, 7, 9, 11, and 14 d relative to parturition; n = 28 cows), and liver biopsies (1, 14, and 28 d postpartum; n = 22 cows) were collected from Holstein cows. Cows were retrospectively grouped as HYK or nonHYK based on BHB concentrations in postpartum blood samples. Average first positive test (BHB ≥ 1.2 mM) was 9 ± 5 d (± SD). Cows diagnosed with HYK had greater C18:1 and lower C18:2 plasma proportions. Liver FA proportions of C16:0 and C18:1 were related to proportions in plasma, but C18:0 and C18:2 were not. Some interactions between plasma FA and HYK on liver FA proportion suggests that there may be preferential use depending upon metabolic state. Cows diagnosed with HYK had decreased pyruvate carboxylase (PC) expression, but no difference at 1 d postpartum in either cytosolic or mitochondrial isoforms of phosphoenolpyruvate carboxykinase (PCK). The increased PC to PCK ratios in nonHYK cows suggests the potential for greater hepatic oxidative capacity, coinciding with decreased circulating BHB. Interestingly, FA, known regulators of PC expression, were not correlated with PC expression at 1 d postpartum. Taken together, these data demonstrate that HYK cows experience a decrease in the ratio of hepatic PC to PCK at 1 day postpartum prior to HYK diagnosis which, on average, manifested a week later. The differential regulation of PC involved in HYK diagnosis may not be completely due to shifts in FA profiles and warrants further investigation

Effect of feeding a reduced-starch diet with or without amylase addition on lactation performance in dairy cows

The objective of this study was to determine lactation performance responses of high-producing dairy cows to a reduced-starch diet compared with a normal-starch diet and to the addition of exogenous amylase to the reduced-starch diet. Thirty-six multiparous Holstein cows (51 +/- 22 DIM and 643 +/- 49 kg of body weight at trial initiation) were randomly assigned to I of 3 treatments in a completely randomized design: a 3-wk covariate adjustment period during which the cows were fed the normal-starch diet, followed by a 12-wk treatment period during which the cows were fed their assigned treatment diets. The normal-starch TMR did not contain exogenous amylase (NS-). The reduced-starch diets, formulated by partially replacing corn grain with soy hulls, were fed without (RS-) and with (RS+) exogenous amylase added to the TMR. Starch and NDF concentrations averaged 27.1 and 30.6%, 21.8 and 36.6%, and 20.7 and 36.6% (dry matter basis) for the NS-, RS-, and RS+ diets, respectively. Dry matter intake for cows fed the RS- diet was 2.4 and 3.2 kg/d greater than for cows fed the NS- and RS+ diets, respectively. Intake of NDF ranged from 1.19 to 1.52% of body weight among the treatments, with the RS- diet being 28% greater than the NS- diet and 13% greater than the RS+ diet. Milk yield averaged 50.4 kg/d and was unaffected by treatment. Fat-corrected milk yield was 2.9 kg/d greater for cows fed the RS- diet than for cows fed the NS- diet. Body weight and body condition score measurements were unaffected by treatment. Fat, solids-, and energy-corrected milk feed conversions (kilograms/kilogram of DMI) were 12 to 13% greater for cows fed the RS+ diet than for cows fed the RS-diet. Dry matter and nutrient digestibilities were lowest for cows fed the NS- diet and greatest for cows fed the RS+ diet, and were greater for cows fed the RS+ diet than for cows fed the RS- diet, with the exception of starch digestibility, which was similar. Greater conversion of feed to milk for dairy cows fed reduced-starch diets that include exogenous amylase may offer potential for improving economic performance.DSM Nutritional Products (Basel, Switzerland