Genetic algorithm full-waveform inversion: uncertainty estimation and validation of the results

We cast the genetic algorithm-full waveform inversion (GA-FWI) in a probabilistic framework that through a multi-step procedure, allows us to estimate the posterior probability distribution (PPD) in model space. Since GA is not a Markov chain Monte Carlo method, it is necessary to refine the PPD estimated by GA (GA PPD) via a resampling of the model space with a Gibbs sampler (GS), thus obtaining the GA+GS PPDs. We apply this procedure to two acoustic 2D models, an inclusion model and the Marmousi model, and we find a good agreement between the derived PPDs and the varying resolution due to changes in the seismic illumination. Finally, we randomly extract several models from the so derived PPDs to start many local full-waveform inversions (LFWIs), which produce final high-resolution models. This set of models is then used to numerically estimate the final uncertainty (GA+GS+LFWI PPD). The multimodal and wide PPDs derived from the GA optimization, become unimodal and narrower after LFWI and, in the well illuminated parts of the subsurface, the final GA+GS+LFWI PPDs contain the true model parameters. This confirms the ability of the GA optimization in finding a velocity model suitable as input to LFWI

Essential oil of Cyphostemma juttae (Vitaceae): chemical composition and antitumor mechanism in triple negative breast cancer cells

The genus Cyphostemma (Planch.) Alston (Vitaceae) includes about 150 species distrib- uted in eastern and southern Africa and Madagascar. Some species are used in traditional medicine and their biological activities, including antiproliferative effects against cancer cell lines, have been demonstrated. To date no investigations on Cyphostemma essential oils have been carried out. Essential oils, which play important roles in plant defenses have been demonstrated to be active in the treatment of several human diseases and to enhance bioavability of other drugs. The aim of this paper was to identify the chemical composition of the essential oil of the leaves of Cyphostemma juttae (Dinter & Gilg) Desc. and to verify some biological activities on two triple negative breast cancer cell lines (MDA-MB-231, SUM 149), characterized by the over-expression of the transcription factor NF-κB. In the essential oil, obtained by hydrodistillation and analysed by gas chromatography-mass spectrometry, 39 compounds were detected and with phytol (30%) dominating the chemical composition. C. juttae essential oil reduced cell growth and showed a pro-oxidant activity in both cell lines. Moreover, C. juttae essential oil caused a substantial decrease of NF-κB activation and consequently a significant reduction of some NF-κB target genes. The present study shows for the first time the cytotoxic properties of C. juttae essential oil and highlight its avail- ability to interfere with NF-κB pathway, suggesting a potential therapeutic use in triple nega- tive breast cancers (TNBCs) of this essential oil

Regulating Internet Trade in CITES Species

Wild collection of species that are or may be endangered by collection from the wild for international commerce is regulated under the The Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) for 176 member States. Internet commerce is a relatively a new route for such trade and is rarely included in CITES statistics. By comparing information from an international on-line auction system with official CITES records on international trade, we discovered that only around 10% of the specimens of cacti listed on CITES Appendix I traded in 2010 were even potentially legal. Clearly, such trade over the Internet easily bypasses CITES trade regulations and should be monitored in future to ensure the effective protection of CITES listed species

Influence of Culture Conditions on In Vitro Asymbiotic Germination of Anacamptis longicornu and Ophrys panormitana (Orchidaceae)

This study is the first approach to in vitro asymbiotic germination of two species of Sicilian threatened terrestrial orchids, Anacamptis longicornu and Ophrys panormitana. Seeds were collected in the wild and cultured in two different media—Orchimax medium (OM) and Murashige and Skoog (MS)—and exposed to different photoperiods and temperatures to evaluate the best conditions for the specific stages of development. The germination of A. longicornu was very high on OM (95.5%) and lower on MS medium (21.4%), whereas O. panormitana germinated only on OM medium, with significantly lower percentages (12.0%), compared with A. longicornu. This difference is caused by variation in quality and quantity of nutrients used, primarily by nitrogen source. The results show that temperature and photoperiod widely affect seed germination and development. Although further investigations on asymbiotic and symbiotic germination are needed for the improvement of conservation of Mediterranean terrestrial orchids, our results contribute to the conservation of this group of plants

Potassium deficiency and drought stress in grapevine cultivars

Potassium availability affects drought responses in plants through several metabolic roles, among which stomatal regulation, cell growth and xylem hydraulics. Vitis vinifera L. is a highly valuable crop and several genotypes have been selected during its millennial cultivation. Varieties show differences in their adaptability to stress conditions, making them more or less suitable to certain climatic and edaphic conditions. The varieties cultivated in Sicily are characterized by high variability. We investigated the response of two Sicilian cultivars (Nero d'Avola and Catarratto) to potassium deficiency and drought stress. Two-year-old grafted plants were grown in agriperlite, with or without potassium in the fertigation solution, and subjected to moderate drought stress by suspending irrigation for 6-8 days. Potassium content of xylem sap, leaf and root tissues were measured with an ion-selective electrode. Changes in stomatal conductance, plant transpiration and hydraulic conductance were compared between genotypes and treatments, in order to gain information for the development of optimal fertigation practices and the selection of the most drought tolerant varieties

Headspace Volatile Composition of the Flowers of Caralluma europaea N.E.Br. (Apocynaceae)

The volatile constituents of the flowers of Caralluma (Apteranthes) europaea (Guss.) N.E. Br. (Apocynaceae - Asclepiadoideae) from Lampedusa Island were analyzed by headspace method. The analyses allowed the identification and quantification of 41 compounds. The main components were, among the monoterpenoids, terpinolene (23.3%), a-terpinene (19.1%) and linalool (18.4%), whereas, among the carbonylic compounds the major constituents were heptanal (2.0%), octanoic acid (2.4%) and hexanoic acid (1.7%). It is worth to mention the presence of a nitrogen containing compound, indole (0.8%) and of a sulphur containing compound, dimethylsulphide (t). The compounds found in the flowers of C. europea have been compared with data available in the literature as regard to their odor, presence in other sapromyiophilous taxa, possible role as semiochemicals, and presence in decaying organ matter. 89.3% of total constituents have been described in other sapromyiophilous taxa. Some of the compounds are present in several type of decaying organic matter (excrements, body in decomposition, and spoiled fish, etc). Several volatiles found in C. europea flowers are used as semiochemicals in Hymenoptera, Coleoptera, Diptera, Lepidoptera and other insects. Sixteen volatiles, accounting for 32.4% of the total constituents, are described as attractants of some Diptera families with a biology linked to decaying organic matters. Our data thus confirm that C. europea floral bouquet falls within the sapromyiophilous pollination syndrome

Somatic embryogenesis and flow cytometric assessment of nuclear genetic stability for Sansevieria spp.: an approach for in vitro regeneration of ornamental plants

Sansevieria Thunb. species are traditionally known as succulent ornamental plants world- wide. They are also cultivated for medicinal, fodder, soil conservation and fiber uses, and for their capacity to reduce environmental pollution. Sansevieria sexual propagation is limited by the lack of viable seeds, and reproduction is largely made via vegetative propagation by suckers or cuttings. For these reasons, genetic improvement by conventional breeding is limited. To overcome this problem and to address the increasing demand from customers for novel Sansevieria varieties, many commercial companies regularly use in vitro propagation, as is the case in the breeding process of several ornamental plants. In this paper, for the first time, we report a procedure for in vitro somatic embryogenesis and plant regeneration starting from three flower explants for seven different Sansevieria genotypes. Regeneration was attempted using stigmas/styles, anther/filament, and ovary which were cultured on a Murashige and Skoog solidified medium under three different plant growth regulator combinations. A good regeneration rate was obtained with all genotypes used under all culture conditions tested from every explant type, with percentages ranging from 0 to 73.3%. “Genetic stability” assessment of regenerated plants in respect to their mother plants was verified through flow cytometry analysis showing a high degree of uniformity, with only S. parva exhibiting a different level of DNA fluorescence among in vitro regenerated plants. This is an interesting achievement in the aim to produce true-to-type plants and new variants with desirable characteristics, both of which are desired features in ornamentals improvement