EFFECT OF SURFACE IRRIGATION METHODS AND LAND LEVELING PRACTICES ON COTTON YIELD AND IRRIGATION PERFORMANCES AT NORTH DELTA

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Genetic diversity and phylodynamics of avian coronaviruses in Egyptian wild birds

Avian coronaviruses (ACoVs) are continuously evolving and causing serious economic consequences in the poultry industry and around the globe. Owing to their extensive genetic diversity and high mutation rates, controlling ACoVs has become a challenge. In this context, the potential contribution of wild birds in the disease dynamics, especially in domesticated birds, remains largely unknown. In the present study, five hundred fifty-seven (n = 557) cloacal/fecal swabs were collected from four different wild bird species from eight Egyptian governorates during 2016 and a total of fourteen positive isolates were used for phylodynamics and evolutionary analysis. Genetic relatedness based on spike (S1) gene demonstrated the clustering of majority of these isolates where nine isolates grouped within Egy/variant 2 (IS/885 genotype) and five isolates clustered within Egy/variant 1 (IS/1494/06 genotype). Interestingly, these isolates showed noticeable genetic diversity and were clustered distal to the previously characterized Egy/variant 1 and Egy/variant 2 in Egyptian commercial poultry. The S1 gene based comparison of nucleotide identity percentages revealed that all fourteen isolates reported in this study were genetically related to the variant GI-23 lineage with 92–100% identity. Taken together, our results demonstrate that ACoVs are circulating in Egyptian wild birds and highlight their possible contributions in the disease dynamics. The study also proposes that regular monitoring of the ACoVs in wild birds is required to effectively assess the role of wild birds in disease spread, and the emergence of ACoVs strains in the country. © 2019 by the authors. Licensee MDPI, Basel, Switzerland

Permeation of water as a tool for characterizing the effect of solvent, film thickness and water solubility in cellulose acetate membranes

Cellulose acetate membranes have been used in many applications; of particular interest are reverse osmosis systems, and as a neutral matrix for incorporation of different polymers (e.g., conducting polymers), inorganic ions (e.g., lanthanides) and organic (e.g., pharmaceutical) compounds. The properties of the new polymers derived from cellulose acetate or blends depend on those of cellulose acetate. This work presents an attempt to find links between thermodynamic and kinetic properties of cellulose acetate membranes in equilibrium with water. Water diffusion coefficients in cellulose acetate membranes are reported, measured with a simple water permeation technique. The comparison of these values with the percentage of water uptake and polymer thickness leads to interesting conclusions related with different polymer properties.http://www.sciencedirect.com/science/article/B6TWW-4DVBFCN-7/1/63e48f8aac1513c35feeaa6c746621e

Generation of Recombinant Vaccinia Viruses via Green Fluorescent Protein Selection

We developed a rapid method to generate recombinant vaccinia viruses (rVVs) based upon a bicistronic cassette encoding the gene for green fluorescent protein (GFP) and a foreign gene of interest separated by an internal ribosome entry site (IRES). As proof-of-concept, we inserted a mutant env gene of human immunodeficiency virus (HIV) into the cassette, which was cloned into the vaccinia virus (VV) insertion vector pSC59 under the control of the early-late VV synthetic promoter and flanked by disrupted tk gene sequences. To generate rVVs, 293T cells were inoculated with wild-type (wt) VV, followed by transfection of the modified pSC59 vector containing the bicistronic cassette, which allows expression of GFP and the protein of interest. Next, GFP-positive cells were isolated by flow cytometry or by picking under a fluorescent microscope. Thymidine kinase–deficient (Tk−) 143B cells were then exposed to lysates of GFP-positive 293T cells and cultured in the presence of bromodeoxyuridine. This selection allows only Tk− rVV to remain viable. We demonstrated the success of this GFP selection strategy by expressing high levels of mutant HIV Env. Our approach shortens the time needed to generate rVVs and represents a practical approach to generate recombinant proteins