The mixed-layer climatology in the northwestern part of the North Pacific subtropical gyre and the formation area of Subtropical Mode Wate

Climatological character of the mixed layer in the northwestern part of the subtropical North Pacific and the formation area of Subtropical Mode Water (STMW) are investigated using all available hydrographic data compiled by the Japan Oceanographic Data Center. Various monthly mean properties of the mixed layer averaged over 2° × 5° (lat. × lon.) rectangles are presented. In the heating season, the mixed layer is less thick throughout the region, while in the cooling season, a prominent thick mixed layer whose properties correspond with those of STMW evolves just off the Kuroshio both south and east of Japan. This probable formation area of STMW is further described by presenting scatter diagrams for the set of the individual mixed layers and constructing mean fields of the mixed layer near the Kuroshio, using the thermocline depth as an offshore coordinate. The relationship between properties of the STMW formation area and those of STMW observed in the 137E section (Suga et al., 1989) suggests a plausible Kuroshio recirculation system

Western North Pacific Integrated Physical-Biogeochemical Ocean Observation Experiment (INBOX): Part 3. Mesoscale variability of dissolved oxygen concentrations observed by multiple floats during S1-INBOX

As part of the interdisciplinary project S1-INBOX (Western North Pacific Integrated Physical-Biogeochemical Ocean Observation Experiment conducted around the S1 biogeochemical mooring site), we used data from more than 18 floats and a biogeochemical mooring S1 (near 30° N, 145° E) to investigate temporal and spatial changes in the shallow oxygen maximum (SOM) associated with a mesoscale cyclonic eddy. On the northern edge of the cyclonic eddy, patches (linear dimensions of 20–40 km) with relatively high oxygen concentrations were observed around the SOM. The patterns of the oxygen concentrations reflected the fact that changes of the depths of the isopycnal surfaces were caused by small disturbances associated with the eddy structure along the eddy edge. The implication is that nutrient-rich water was supplied by upward isopycnal heaving at the edge of the eddy and contributed to the formation of the high-oxygen patches. As relatively high oxygen concentrations on the same isopycnal surfaces at greater depths were sometimes observed in the region downstream of the high-oxygen patches, we suggest that the patches were advected to the downstream region. The high-oxygen water seemed to extend into the eddy core from its edge. Ageostrophic secondary circulation around the edge of the eddy might have contributed to maintenance of the high oxygen concentrations in the eddy core, and these high oxygen concentrations may have been formed during spin-up of the eddy by heaving of isopycnal surfaces

Western North Pacific Integrated Physical-Biogeochemical Ocean Observation Experiment (INBOX): Part 2. Biogeochemical responses to eddies and typhoons revealed from the S1 mooring and shipboard measurements

An interdisciplinary project called S1-INBOX (Western North Pacific Integrated PhysicalBiogeochemical Ocean Observation Experiment conducted around the S1 biogeochemical mooring site) was carried out during the summer of 2011 in the oligotrophic, subtropical North Pacific Ocean near biogeochemical mooring S1 (30° N, 145° E). Results from the S1 mooring during S1-INBOX revealed a large export flux at a depth of 200 m, a high chlorophyll a concentration in the deep chlorophyll maximum layer, and a high potential photochemical efficiency of photosystem II. These phenomena were associated with vertical uplift of isopycnal surfaces at the edge of a cyclonic eddy and a transition from the cyclonic eddy to an anticyclonic eddy. Shipboard biogeochemical surveys conducted during oligotrophic conditions in July 2011 revealed that the phytoplankton community in these waters was dominated by small species that are responsive to intermittent supplies of nutrients. Surface wind forcing because of Typhoons MA-ON and SONCA may have generated near-inertial oscillations. Diapycnal mixing associated with near-inertial waves was also related to high export fluxes, the indication being that propagation of near-inertial internal waves and subsequent mixing may have been important to biogeochemical phenomena during S1-INBOX

OneArgo: a new paradigm for observing the global ocean

© The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Owens, W., Zilberman, N., Johnson, K., Claustre, H., Scanderbeg, M., Wijffels, S., & Suga, T. OneArgo: a new paradigm for observing the global ocean. Marine Technology Society Journal, 56(3), (2022): 84–90, https://doi.org/10.4031/MTSJ.56.3.8.OneArgo is a major expansion of the Argo program, which has provided two decades of transformative physical data for the upper 2 km of the global ocean. The present Argo array will be expanded in three ways: (1) Global Core: the existing upper ocean measurements will be extended to high latitudes and marginal seas and with enhanced coverage in the tropics and western boundaries of the major ocean basins; (2) Deep: deep ocean measurements will be obtained for the 50% of the global oceans that are below 2,000-m depth; and (3) Biogeochemical: dissolved oxygen, pH, nitrate, chlorophyll, optical backscatter, and irradiance data will be collected to investigate biogeochemical variability of the upper ocean and the processes by which these cycles respond to a changing climate. The technology and infrastructure necessary for this expansion is now being developed through large-scale regional pilots to further refine the floats and sensors and to demonstrate the utility of these measurements. Further innovation is expected to improve the performance of the floats and sensors and to develop the analyses necessary to provide research-quality data. A fully global OneArgo should be operational within 5–10 years.In the United States, the National Science Foundation–funded Global Ocean Biogeochemistry Array (GO-BGC; https://go-bgc.org)

Western North Pacific Integrated Physical-Biogeochemical Ocean Observation Experiment (INBOX): Part 1.Specifications and chronology of the S1-INBOX floats

An interdisciplinary project called the Western North Pacific Integrated Physical-Biogeochemical Ocean Observation Experiment (INBOX) has been conducted since 2011. In the oligotrophic subtropics south of the Kuroshio Extension near biogeochemical mooring S1 (30° N, 145° E), 18 floats, each with a dissolved oxygen sensor, have been deployed in a 150 × 150 km square area. With the horizontal (30 km) and temporal (2 days) resolution of the data, we observed an upper ocean structure associated with mesoscale eddies and ocean responses to atmospheric forcing. The data set obtained from the S1-INBOX study was used to elucidate the impacts of physical processes on biogeochemical phenomena. This article is the first in a series of articles: specific information about the floats and a chronology of events are provided

A Novel Plasmid Carrying Capsule Gene Cluster Found in Lactococcus garvieae Isolated from Filefish

Lactococcus garvieae is recognized as a crucial bacterial pathogen of freshwater and marine fish species. It has been divided into two serological phenotypes, namely KG? and KG+. Difference of the two phenotypes is owing to the presence or absence of polysaccharide capsule, and a phenotypic change from KG? to KG+ occurs during stocking of isolates for a long period or by repeated subculturing. We found that the phenotypic change occurred more readily in L. garvieae isolates from cultured filefish, thread-sail filefish Stephanolepis cirrhifer and black scraper Thamnaconus modestus, than those from other fish species. Thus we studied the gene cluster for capsular polysaccharide biosynthesis (capsule gene cluster) of a filefish isolate, strain BSLG13015, and revealed that the strain possessed the same capsule gene cluster as those from other fish species, but that it was integrated in a newly identified plasmid. The plasmid, a size of 31,654 bp and circular, was named pBSLG13015. It was detected in all of KG? filefish isolates but not in KG+ filefish isolates or L. garvieae from other fish species. It is highly probable that the easier change from KG? to KG+ in L. garvieae filefish isolates is attributed to the loss of the plasmid

Fifteen years of ocean observations with the global Argo array

More than 90% of the heat energy accumulation in the climate system between 1971 and the present has been in the ocean. Thus, the ocean plays a crucial role in determining the climate of the planet. Observing the oceans is problematic even under the most favourable of conditions. Historically, shipboard ocean sampling has left vast expanses, particularly in the Southern Ocean, unobserved for long periods of time. Within the past 15 years, with the advent of the global Argo array of pro ling oats, it has become possible to sample the upper 2,000 m of the ocean globally and uniformly in space and time. The primary goal of Argo is to create a systematic global network of pro ling oats that can be integrated with other elements of the Global Ocean Observing System. The network provides freely available temperature and salinity data from the upper 2,000 m of the ocean with global coverage. The data are available within 24 hours of collection for use in a broad range of applications that focus on examining climate-relevant variability on seasonal to decadal timescales, multidecadal climate change, improved initialization of coupled ocean–atmosphere climate models and constraining ocean analysis and forecasting systems.En prens

Argo data 1999-2019: two million temperature-salinity profiles and subsurface velocity observations from a global array of profiling floats.

© The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wong, A. P. S., Wijffels, S. E., Riser, S. C., Pouliquen, S., Hosoda, S., Roemmich, D., Gilson, J., Johnson, G. C., Martini, K., Murphy, D. J., Scanderbeg, M., Bhaskar, T. V. S. U., Buck, J. J. H., Merceur, F., Carval, T., Maze, G., Cabanes, C., Andre, X., Poffa, N., Yashayaev, I., Barker, P. M., Guinehut, S., Belbeoch, M., Ignaszewski, M., Baringer, M. O., Schmid, C., Lyman, J. M., McTaggart, K. E., Purkey, S. G., Zilberman, N., Alkire, M. B., Swift, D., Owens, W. B., Jayne, S. R., Hersh, C., Robbins, P., West-Mack, D., Bahr, F., Yoshida, S., Sutton, P. J. H., Cancouet, R., Coatanoan, C., Dobbler, D., Juan, A. G., Gourrion, J., Kolodziejczyk, N., Bernard, V., Bourles, B., Claustre, H., D'Ortenzio, F., Le Reste, S., Le Traon, P., Rannou, J., Saout-Grit, C., Speich, S., Thierry, V., Verbrugge, N., Angel-Benavides, I. M., Klein, B., Notarstefano, G., Poulain, P., Velez-Belchi, P., Suga, T., Ando, K., Iwasaska, N., Kobayashi, T., Masuda, S., Oka, E., Sato, K., Nakamura, T., Sato, K., Takatsuki, Y., Yoshida, T., Cowley, R., Lovell, J. L., Oke, P. R., van Wijk, E. M., Carse, F., Donnelly, M., Gould, W. J., Gowers, K., King, B. A., Loch, S. G., Mowat, M., Turton, J., Rama Rao, E. P., Ravichandran, M., Freeland, H. J., Gaboury, I., Gilbert, D., Greenan, B. J. W., Ouellet, M., Ross, T., Tran, A., Dong, M., Liu, Z., Xu, J., Kang, K., Jo, H., Kim, S., & Park, H. Argo data 1999-2019: two million temperature-salinity profiles and subsurface velocity observations from a global array of profiling floats. Frontiers in Marine Science, 7, (2020): 700, doi:10.3389/fmars.2020.00700.In the past two decades, the Argo Program has collected, processed, and distributed over two million vertical profiles of temperature and salinity from the upper two kilometers of the global ocean. A similar number of subsurface velocity observations near 1,000 dbar have also been collected. This paper recounts the history of the global Argo Program, from its aspiration arising out of the World Ocean Circulation Experiment, to the development and implementation of its instrumentation and telecommunication systems, and the various technical problems encountered. We describe the Argo data system and its quality control procedures, and the gradual changes in the vertical resolution and spatial coverage of Argo data from 1999 to 2019. The accuracies of the float data have been assessed by comparison with high-quality shipboard measurements, and are concluded to be 0.002°C for temperature, 2.4 dbar for pressure, and 0.01 PSS-78 for salinity, after delayed-mode adjustments. Finally, the challenges faced by the vision of an expanding Argo Program beyond 2020 are discussed.AW, SR, and other scientists at the University of Washington (UW) were supported by the US Argo Program through the NOAA Grant NA15OAR4320063 to the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) at the UW. SW and other scientists at the Woods Hole Oceanographic Institution (WHOI) were supported by the US Argo Program through the NOAA Grant NA19OAR4320074 (CINAR/WHOI Argo). The Scripps Institution of Oceanography's role in Argo was supported by the US Argo Program through the NOAA Grant NA15OAR4320071 (CIMEC). Euro-Argo scientists were supported by the Monitoring the Oceans and Climate Change with Argo (MOCCA) project, under the Grant Agreement EASME/EMFF/2015/1.2.1.1/SI2.709624 for the European Commission