Correlation, path coefficient analysis and heritability for agronomic characters of oil palm (Elaeis guineensis Jacq.)

A study of correlation, path coefficient analysis and heritablity for some agronomic characters of oil palm was investigated during February 1998 to January 2002. The oil palm population used in this experiment was derived from F1 tenera hybrids which were collected from various oil palm plantations in Southern Thailand. One good performance bunch (i.e., big bunch, thin shell) was selected from each plantation and four to six seeds per selected bunch were used for cultivation. One thousand thirty eight plants were grown at Klong Hoi Khong Research Station, Faculty of Natural Resources, Prince of Songkla University, Songkhla, in 1989. Forty five palms consisted of Dura, Tenera and Pisifera types with 18, 18 and 9 plants respectively, were selected by randomization and tagged for investigation. The oil palm bunch yield and yield component characters were observed from individual palm for 4 years (February 1998 to January 2002). The bunch composition characters were analysed from a single bunch of each palm, sampled between June to October 1999. The results showed that in F2 plants of oil palm, the correlation and the path coefficient between characters relating to oil yield and %oil/bunch varied according to oil palm types (Dura, Tenera and Pisifera). In Dura and Tenera palms, the characters which gave highly positive correlation with a large direct and indirect positive effects on oil yield and %oil/bunch were total bunch weight, %oil/bunch, %fruit/bunch and %oil/fruit. In case of Pisifera palms, the characters which gave highly positive correlation with a large direct and indirect positive effects on oil yield and %oil/bunch were total bunch weight, number of bunches, single bunch weight, %oil/bunch and %fruit/bunch. However, from all investigated characters in F2 plants, only %mesocarp/fruit, %oil/fruit and %fruit/bunch showed the high values of broad sense heritabilities

Identification of a predicted trimeric autotransporter adhesin required for biofilm formation of Burkholderia pseudomallei.

The autotransporters are a large and diverse family of bacterial secreted and outer membrane proteins, which are present in many Gram-negative bacterial pathogens and play a role in numerous environmental and virulence-associated interactions. As part of a larger systematic study on the autotransporters of Burkholderia pseudomallei, the causative agent of the severe tropical disease melioidosis, we have constructed an insertion mutant in the bpss1439 gene encoding an unstudied predicted trimeric autotransporter adhesin. The bpss1439 mutant demonstrated a significant reduction in biofilm formation at 48 hours in comparison to its parent 10276 wild-type strain. This phenotype was complemented to wild-type levels by the introduction of a full-length copy of the bpss1439 gene in trans. Examination of the wild-type and bpss1439 mutant strains under biofilm-inducing conditions by microscopy after 48 hours confirmed that the bpss1439 mutant produced less biofilm compared to wild-type. Additionally, it was observed that this phenotype was due to low levels of bacterial adhesion to the abiotic surface as well as reduced microcolony formation. In a murine melioidosis model, the bpss1439 mutant strain demonstrated a moderate attenuation for virulence compared to the wild-type strain. This attenuation was abrogated by in trans complementation, suggesting that bpss1439 plays a subtle role in the pathogenesis of B. pseudomallei. Taken together, these studies indicate that BPSS1439 is a novel predicted autotransporter involved in biofilm formation of B. pseudomallei; hence, this factor was named BbfA, Burkholderia biofilm factor A

Use of glucometer and fasting blood glucose as screening tools for diabetes mellitus type 2 and glycated haemoglobin as clinical reference in rural community primary care settings of a middle income country

Abstract Background Thailand is considered to be a middle income country, and to control and prevent type 2 diabetes mellitus (T2DM) is one of the main concerns of the Thai Ministry of Public Health (MoPH). Screening for T2DM and care for T2DM patients has been integrated into the primary health care system, especially in rural areas. The intention of this investigation is to link public health research at the academic level with the local health authorities of a district of a north-eastern province of the country. Methods Epidemiological methods were applied to validate the screening tools fasting capillary blood glucose (CBG), measured by glucometer and venous blood for the determination of plasma glucose (VPG), used for screening for T2DM among asymptomatic villagers. For assessing the validity of these two methods glycated haemoglobin (HbA1c) values were determined and used as the ‘clinical reference’. Results All together 669 villagers were investigated. Determinations of CBG and VPG resulted in suspected T2DM cases, with 7.3% when assessed by CBG and 6.4% by VPG using a cutoff point of 7 mmol/L (126 mg/dl). Taking HbA1c determinations with a cutoff point of 7% into account, the proportion of T2DM suspected participants increased to 10.4%. By estimating sensitivity, specificity and the positive predictive value of CBG and VPG against the ‘clinical reference’ of HbA1c, sensitivity below 50% for both screening methods has been observed. The positive predictive value was determined to be 58.5% for CBG and 56.8% for VPG. The specificity of the two screening tests was over 96%. Conclusions The low sensitivity indicates that using fasting CBG or VPG as a screening tool in the field results in a high proportion of diseased individuals remaining undetected. The equally low positive predictive values (below 60%) indicate a high working load for the curative sector in investigating suspected T2DM cases to determine whether they are truly diseased or false positive cases according to the screening method. Further implications of the results and the controversial discussion related to the use of HbA1c as clinical evidence for suffering from T2DM are also discussed.</p

Association of root, specific leaf area and SPAD chlorophyll meter reading to water use efficiency of peanut under different available soil water

Drought is the major abiotic constraint affecting peanut productivity and quality worldwide. There is a pressing need to improve the water use efficiency (WUE) of rain-fed peanut production. Breeding varieties with higher water use efficiency is seen as providing part of the solution. The objectives of this work were to (i) evaluate genetic variation in WUE, harvest index, root dry weight, specific leaf area (SLA) and SPAD chlorophyll meter reading (SCMR) among peanut genotypes in response to different available soil water levels and (ii) assess the relevance of root dry weight, SLA and SCMR to WUE in peanut under receding soil moisture levels. Two greenhouse experiments were conducted in the dry and rainy seasons in 2002/2003. The 11 peanut genotypes (ICGV 98300, ICGV 98303, ICGV 98305, ICGV 98308, ICGV 98324, ICGV 98330, ICGV 98348, ICGV 98353, Tainan 9, KK 60-3 and Tifton-8) and three soil moisture levels [field capacity (FC), 2/3 available soil water (AW) and 1/3 AW] were laid out in a factorial randomized complete block design (RCBD) with six replications. At 37, 67, and 97 day after sowing (DAS), data were recorded for SLA and SCMR. Root dry weight, harvest index (HI) and WUE were recorded at harvest. Drought reduced WUE, root dry weight and HI. Across both seasons, Tifton-8 and ICGV 98300 had high WUE and also had large root systems under drought conditions. ICGV 98324 and Tifton-8 had low SLA and high SCMR under stressed and non-stressed condition. Under drought conditions, ICGV 98324 had high HI and Tifton-8 had low HI. Root dry weight had a greater contribution to WUE under well-watered and mild drought (2/3 AW). Under severe drought (1/3 AW), SLA showed a more important contribution to WUE than the other traits. Traits that were associated to high WUE under drought conditions were different among different peanut genotypes. ICGV 98300 maintained high root dry weight under 2/3 AW and ICGV 98324 maintained low SLA and high SCMR under 1/3 AW. Tifton-8 had both large root systems and low SLA associated with high WUE.Arachis hypogaea L Breeding Drought resistance Irrigation deficit SCMR SLA Water use efficiency

Physiological basis for tolerance to and recovery from pre-flowering drought in peanut

Drought during the pre-flowering stage can increase yield of peanut. There is limited information on genotypic variation for tolerance to and recovery from pre-flowering drought (PFD) and more importantly the physiological traits underlying genotypic variation. The objectives of this study were to determine the effects of moisture stress during the pre-flowering phase on pod yield and to understand some of the physiological responses underlying genotypic variation in response to and recovery from PFD. A glasshouse and field experiments were conducted at Khon Kaen University, Thailand. The glasshouse experiment was a randomized complete block design consisting of two watering regimes, i.e. fully-irrigated control and 1/3 available soil water from emergence to 40 days after emergence followed by adequate water supply, and 12 peanut genotypes. The field experiment was a split-plot design with two watering regimes as main-plots, and 12 peanut genotypes as sub-plots. Measurements of N fixation, leaf area (LA) were made in both experiments. In addition, root growth was measured in the glasshouse experiment. Imposition of PFD followed by recovery resulted in an average increase in yield of 24 % (range from 10 % to 57 %) and 12 % (range from 2 % to 51 %) in the field and glasshouse experiments, respectively. Significant genotypic variation for N fixation, LA and root growth was also observed after recovery. The study revealed that recovery growth following release of PFD had a stronger influence on final yield than tolerance to water deficits during the PFD. A combination of N fixation, LA and root growth accounted for a major portion of the genotypic variation in yield (r = 0.68-0.93) suggesting that these traits could be used as selection criteria for identifying genotypes with rapid recovery from PFD. A combined analysis of glasshouse and field experiments showed that LA and N fixation during the recovery had low genotype × environment interaction indicating potential for using these traits for selecting genotypes in peanut improvement programs