Hardware-accelerated parallel genetic algorithm for fitness functions with variable execution times

Genetic Algorithms (GAs) following a parallel master-slave architecture can be effectively used to reduce searching time when fitness functions have fixed execution time. This paper presents a parallel GA architecture along with two accelerated GA operators to enhance the performance of master-slave GAs, specially when considering fitness functions with variable execution times. We explore the performance of the proposed approach, and analyse its effectiveness against the state-of-the-art. The results show a significant improvement in search times and fitness function utilisation, thus potentially enabling the use of this approach as a faster searching tool for timing-sensitive optimisation processes such as those found in dynamic real-time systems

Retinal thickness in eyes with mild nonproliferative retinopathy in patients with type 2 diabetes mellitus: comparison of measurements obtained by retinal thickness analysis and optical coherence tomography

OBJECTIVE: To compare measurements of retinal thickness in eyes with mild nonproliferative retinopathy in patients with type 2 diabetes mellitus using 2 different techniques: the retinal thickness analyzer (RTA) and optical coherence tomography (OCT). METHODS: Twenty-eight eyes from 28 patients with type 2 diabetes mellitus and mild nonproliferative retinopathy were classified according to the Wisconsin grading system by 7-field stereoscopic fundus photography. Ten eyes were classified as level 10 (absence of visible lesions) and 18 as level 20 or 35 (minimal retinopathy). All eyes were examined by the RTA and OCT. Healthy populations were used to establish reference maps for the RTA (n = 14; mean age, 48 years; age range, 42-55 years) and OCT (n = 10; mean age, 56 years; age range, 43-68 years). Reference maps were computed using the means + 2 SDs of the values obtained for each location. Increases in thickness were computed as a percentage of increase over these reference maps. RESULTS: The RTA detected increases in thickness in 1 or more locations in 24 of the 28 diabetic eyes examined, whereas OCT detected increases in only 3 eyes. The percentages of increase detected by the RTA ranged from 0.3% to 73.5%, whereas OCT detected percentages of increase of 0.3% to 4.8%. CONCLUSION: Optical coherence tomography is less sensitive than the RTA in detecting localized increases in retinal thickness in the initial stages of diabetic retinal disease

Mosaic hoxb4a Neuronal Pleiotropism in Zebrafish Caudal Hindbrain

To better understand how individual genes and experience influence behavior, the role of a single homeotic unit, hoxb4a, was comprehensively analyzed in vivo by clonal and retrograde fluorescent labeling of caudal hindbrain neurons in a zebrafish enhancer-trap YFP line. A quantitative spatiotemporal neuronal atlas showed hoxb4a activity to be highly variable and mosaic in rhombomere 7–8 reticular, motoneuronal and precerebellar nuclei with expression decreasing differentially in all subgroups through juvenile stages. The extensive Hox mosaicism and widespread pleiotropism demonstrate that the same transcriptional protein plays a role in the development of circuits that drive behaviors from autonomic through motor function including cerebellar regulation. We propose that the continuous presence of hoxb4a positive neurons may provide a developmental plasticity for behavior-specific circuits to accommodate experience- and growth-related changes. Hence, the ubiquitous hoxb4a pleitropism and modularity likely offer an adaptable transcriptional element for circuit modification during both growth and evolution

Hardware-accelerated analysis of real-time Networks-on-Chip

A real-time Network-on-Chip (NoC) must guarantee that it is able to execute a set of tasks and deliver the communication packets that they generate, all within the respective deadlines even under a worst-case scenario. End-to-End Response Time Analysis (E2ERTA) is a mathematical formulation that can be used to test whether a particular NoC configuration is able to guarantee the timely execution of tasks and delivery packets. The complexity of E2ERTA calculation increases with the increase of the number of tasks and packet flows, and with the core count of the NoC. This paper presents an approach to accelerate E2ERTA calculations through the use of custom hardware and efficient implementation of its mathematical operations. We explore the performance of the proposed approach, and analyse its effectiveness against the state-of-the-art in the field. The results show a significant improvement in testing NoC guarantees, thus potentially enabling the use of E2ERTA as a fast and guaranteed deterministic admission controller for open and dynamic real-time systems. As a case-study, we integrate the proposed approach to a NoC optimisation framework aiming to accelerate the search for NoC configurations that meet all the NoC's hard real-time requirements

Decays of supernova neutrinos

Supernova neutrinos could be well-suited for probing neutrino decay, since decay may be observed even for very small decay rates or coupling constants. We will introduce an effective operator framework for the combined description of neutrino decay and neutrino oscillations for supernova neutrinos, which can especially take into account two properties: One is the radially symmetric neutrino flux, allowing a decay product to be re-directed towards the observer even if the parent neutrino had a different original direction of propagation. The other is decoherence because of the long baselines for coherently produced neutrinos. We will demonstrate how to use this effective theory to calculate the time-dependent fluxes at the detector. In addition, we will show the implications of a Majoron-like decay model. As a result, we will demonstrate that for certain parameter values one may observe some effects which could also mimic signals similar to the ones expected from supernova models, making it in general harder to separate neutrino and supernova properties.Comment: 33 pages, 10 figures, Elsevier LaTeX. Final version to be published in Nuclear Physics

Liver haemangioma: common and uncommon findings and how to improve the differential diagnosis

Haemangiomas are common focal liver lesions, generally detected in the work-up of asymptomatic patients. From the pathological point of view, they can be classified as small (capillary) or large, with cavernous vascular spaces that may show thrombosis, calcifications and hyalinisation. The polymorphic imaging appearance of haemangiomas depends on their histological features and flow pattern. The widespread use of cross-sectional imaging has allowed an increased detection rate and a better characterisation of this benign tumour. Recent developments of ultrasound (US), computed tomography (CT) and magnetic resonance imaging (MRI) providing high spatial and temporal resolution, together with the use of new contrast agents and/or pulse sequences has broadened the spectrum of imaging findings, contributing to diagnostic refinement in difficult cases. The scope of the present article is to provide an overview of the range of appearances of haemangiomas, explored with recent cross-sectional imaging modalities, emphasising its atypical findings as explored by temporally resolved contrast-enhanced imaging

Sustainable Strategy Based on Induced Precipitation for the Purification of Phycobiliproteins

Phycobiliproteins are fluorescent proteins mainly produced by red macroalgae and cyanobacteria. These proteins, essential to the survival of these organisms, find application in many fields of interest, from medical, pharmaceutical, and cosmetic to food and textile industries. The biggest obstacle to their use is the lack of simple environmental and economical sustainable methodologies to obtain these proteins with high purity. In this work, a new purification process is proposed based on the induced precipitation of the target proteins followed by ultrafiltration. Purities of 89.5% of both phycobiliproteins and 87.3% of R-phycoerythrin were achieved using ammonium sulfate and poly(acrylic acid) sodium salts as precipitation agents (followed by an ultrafiltration step), while maintaining high recovery yields and protein structure stability. Environmental analysis performed to evaluate the proposed process shows that the carbon footprint for the proposed process is much lower than that reported for alternative methodology, and the economic analysis reveals the cost-effective character associated to its high performance. This work is a step toward more sustainable and effective methodologies/processes with high industrial potential

Missense MED12 variants in 22 males with intellectual disability: From nonspecific symptoms to complete syndromes

Genotype; Intellectual disability; PhenotypeGenotipo; Discapacidad intelectual; FenotipoGenotip; Discapacitat intel·lectual; FenotipWe describe the phenotype of 22 male patients (20 probands) carrying a hemizygous missense variant in MED12. The phenotypic spectrum is very broad ranging from nonspecific intellectual disability (ID) to the three well-known syndromes: Opitz–Kaveggia syndrome, Lujan–Fryns syndrome, or Ohdo syndrome. The identified variants were randomly distributed throughout the gene (p = 0.993, χ2 test), but mostly outside the functional domains (p = 0.004; χ2 test). Statistical analyses did not show a correlation between the MED12-related phenotypes and the locations of the variants (p = 0.295; Pearson correlation), nor the protein domain involved (p = 0.422; Pearson correlation). In conclusion, establishing a genotype–phenotype correlation in MED12-related diseases remains challenging. Therefore, we think that patients with a causative MED12 variant are currently underdiagnosed due to the broad patients' clinical presentations.Foundation for Science and Technology (FCT), Grant/Award Number: UIDB/00215/2020 UIDP/00215/2020 LA/P/0064/2020; Broad Institute; National Eye Institute; National Heart, Lung and Blood Institute, Grant/Award Number: UM1 HG008900; National Human Genome Research Institute, Grant/Award Number: R01 HG009141

Association of burning mouth syndrome with xerostomia and medicines

Objetivo: Identificar factores de riesgo para el síndrome de boca ardiente (SBA) a través de estudio de casos y controles. Material y métodos: Se realizó análisis cuantitativo del flujo salival total en reposo y estimulado; se registraron la xerostomía subjetiva, el consumo de medicamentos y los estados psicológicos de ansiedad y depresión en 40 pacientes con SBA y 40 controles. Resultados: El análisis ANOVA mostró diferencias significativas en las medias del número de medicamentos/día, número de medicamentos xerostomizantes/día, xerostomía subjetiva, ansiedad y depresión, entre los grupos estudiados. No se observaron diferencias significativas en las tasas de flujo salival en reposo y estimulado. El análisis de asociación Odds ratio determinó asociación del SBA con xerostomía y con el consumo de hipotensores y diuréticos. Conclusiones: Según los resultados de este estudio, se puede afirmar que el consumo de hipotensores y diuréticos fue un factor de riesgo para el padecimiento del SBA. La función de las glándulas salivales en los pacientes con SBA no está deteriorada