910 research outputs found
Hydrological niches in terrestrial plant communities: a review
1. Despite the fundamental significance of water to plants and the persisting question of how competing species coexist, this is the first review of hydrological niches. We define hydrological niche segregation (HNS) as: (i) partitioning of space on fine-scale soil-moisture gradients, (ii) partitioning of water as a resource, and/or (iii) partitioning of recruitment opportunities among years caused by species specializing on particular patterns of temporal variance of water supply (the storage effect).
2. We propose that there are three types of constraint that lead to the trade-offs that underlie HNS. (i) An edaphic constraint creates a trade-off between the supply to roots of O2 on the one hand vs. water and nutrients on the other. (ii) A biophysical constraint governs gas exchange by leaves, leading to a trade-off between CO2 acquisition vs. water loss. (iii) A structural constraint arising from the physics of water-conducting tissues leads to a safety vs. efficiency trade-off.
3. Significant HNS was found in 43 of 48 field studies across vegetation types ranging from arid to wet, though its role in coexistence remains to be proven in most cases. Temporal partitioning promotes coexistence through the storage effect in arid plant communities, but has yet to be shown elsewhere. In only a few cases is it possible to unequivocally link HNS to a particular trade-off.
4. Synthesis. The field and experimental evidence make it clear that HNS is widespread, though it is less clear what its precise mechanisms or consequences are. HNS mechanisms should be revealed by further study of the constraints and trade-offs that govern how plants obtain and use water and HNS can be mechanistically linked to its consequences with appropriate community models. In a changing climate, such an integrated programme would pay dividends for global change research
Citizen Science 2.0 : Data Management Principles to Harness the Power of the Crowd
Citizen science refers to voluntary participation by the general public in scientific endeavors. Although citizen science has a long tradition, the rise of online communities and user-generated web content has the potential to greatly expand its scope and contributions. Citizens spread across a large area will collect more information than an individual researcher can. Because citizen scientists tend to make observations about areas they know well, data are likely to be very detailed. Although the potential for engaging citizen scientists is extensive, there are challenges as well. In this paper we consider one such challenge – creating an environment in which non-experts in a scientific domain can provide appropriate and accurate data regarding their observations. We describe the problem in the context of a research project that includes the development of a website to collect citizen-generated data on the distribution of plants and animals in a geographic region. We propose an approach that can improve the quantity and quality of data collected in such projects by organizing data using instance-based data structures. Potential implications of this approach are discussed and plans for future research to validate the design are described
Experimental investigation of the origin of fynbos plant community structure after fire
Background and aims Species in plant communities segregate along fine-scale hydrological gradients. Although this phenomenon is not unique to fynbos, this community regenerates after fire and therefore provides an opportunity to study the ecological genesis of hydrological niche segregation. Methods Following wildfires at two field sites where we had previously mapped the vegetation and monitored the hydrology, seeds were moved experimentally in >2500 intact soil cores up and down soil-moisture gradients to test the hypothesis that hydrological niche segregation is established during the seedling phase of the life cycle. Seedling numbers and growth were then monitored and they were identified using DNA bar-coding, the first use of this technology for an experiment of this kind. Key Results At the site where niche segregation among Restionaceae had previously been found, the size of seedlings was significantly greater, the wetter the location into which they were moved, regardless of the soil moisture status of their location of origin, or of the species. Seedling weight was also significantly greater in a competition treatment where the roots of other species were excluded. No such effects were detected at the control site where niche segregation among Restionaceae was previously found to be absent. Conclusions The finding that seedling growth on hydrological gradients in the field is affected by soil moisture status and by root competition shows that hydrological niche segregation could potentially originate in the seedling stage. The methodology, applied at a larger scale and followed-through for a longer period, could be used to determine whether species are differently affected by soil moistur
Sense-it: A Smartphone Toolkit for Citizen Inquiry Learning
We describe a toolkit for Android smartphones and tablets that enables a user to access all the sensors available on the device. Data from individual sensors can be viewed as dynamic graphs. Output from one or more sensors can be recorded to a spreadsheet, with the sampling rate set by the learner. As a tool for inquiry learning, the sensors can be linked to ‘missions’ on the nQuire-it website, allowing learners to sample and share data for collaborative crowd-sourced investigations.
Four nQuire-it missions have employed the sensor toolkit for investigating environmental noise, sunlight levels, air pressure and rainfall, and the speed of lifts (elevators). These four investigations represent a variety of methods to initiate, orchestrate and conclude inquiry science learning. Two of the missions are in the context of a study to develop a community of inquiry around weather and meteorology. The others are intended to engage members of the public in practical science activities. Analysis of the missions and the associated online discussions reveals that the Sense-it toolkit can be adopted for practical and engaging science investigations, though the issue of calibrating sensors on personal devices needs to be addressed
Spatial Scaling in Model Plant Communities
We present an analytically tractable variant of the voter model that provides
a quantitatively accurate description of beta-diversity (two-point correlation
function) in two tropical forests. The model exhibits novel scaling behavior
that leads to links between ecological measures such as relative species
abundance and the species area relationship.Comment: 10 pages, 3 figure
Ecological and genetic correlates of long-term population trends in the Park Grass Experiment
The Park Grass Experiment (PGE) is the longest observed set of experimental plant communities in existence. Although the gross composition of the vegetation was at equilibrium over the 60-yr period from 1920 to 1979, annual records show that individual species exhibited a range of dynamics. We tested two hypotheses to explain why some species initially increased nd why subsequently some of these (the outbreak species) decreased gain. The study was designed around eight phylogenetically ndependent contrasts (PICs), each containing related species with ifferent dynamics. Our first hypothesis was that persistent increasers and utbreakers have higher intrinsic rates of natural increase than ontrol species (species without trends), allowing them to spread hen interspecific competition is reduced by drought. This was tested by measuring establishment and seed production of species in ield experiments, with and without interspecific competition. Seed production in outbreak species responded more strongly to release from interspecific competition than it did in either of the ther groups of species. Our second hypothesis was that outbreak species eventually declined because they lacked the genetic variation ecessary to adapt to the novel habitats to which they had initially spread. We tested this by measuring mating systems and genetic diversity in persistent and outbreak species in the PGE. In seven out of seven PICs tested, the outbreak species was more selfing than its persistent relative. There was a significant positive correlation between outcrossing rate and gene diversity. These results support roles for both ecological and genetic traits in long-term dynamics
Designing citizen science tools for learning: lessons learnt from the iterative development of nQuire
This paper reports on a 4-year research and development case study about the design of citizen science tools for inquiry learning. It details the process of iterative pedagogy-led design and evaluation of the nQuire toolkit, a set of web-based and mobile tools scaffolding the creation of online citizen science investigations. The design involved an expert review of inquiry learning and citizen science, combined with user experience studies involving more than 200 users. These have informed a concept that we have termed ‘citizen inquiry’, which engages members of the public alongside scientists in setting up, running, managing or contributing to citizen science projects with a main aim of learning about the scientific method through doing science by interaction with others. A design-based research (DBR) methodology was adopted for the iterative design and evaluation of citizen science tools. DBR was focused on the refinement of a central concept, ‘citizen inquiry’, by exploring how it can be instantiated in educational technologies and interventions. The empirical evaluation and iteration of technologies involved three design experiments with end users, user interviews, and insights from pedagogy and user experience experts. Evidence from the iterative development of nQuire led to the production of a set of interaction design principles that aim to guide the development of online, learning-centred, citizen science projects. Eight design guidelines are proposed: users as producers of knowledge, topics before tools, mobile affordances, scaffolds to the process of scientific inquiry, learning by doing as key message, being part of a community as key message, every visit brings a reward, and value users and their time
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Determinants of species richness in the Park Grass experiment
The Park Grass Experiment at Rothamsted in southeast England was started in 1856, making it the longest-running experiment in plant ecology anywhere in the world. Experimental inputs include a range of fertilizers (nitrogen, phosphorus, potassium, and organic manures) applied annually, with lime applied occasionally, and these have led to an increase in biomass and, where nitrogen was applied in the form of ammonium sulfate, to substantial decreases in soil pH. The number of species per plot varies from three to 44 per 200 m2, affording a unique opportunity to study the determinants of plant species richness and to estimate the effect sizes attributable to different factors. The response of species richness to biomass depends on the amount and type of nitrogen applied; richness declined monotonically with increasing biomass on plots receiving no nitrogen or receiving nitrogen in the form of sodium nitrate, but there was no relationship between species richness and biomass on plots acidified by ammonium sulfate application. The response to lime also depended on the type of nitrogen applied; there was no relationship between lime treatment and species richness, except in plots receiving nitrogen in the form of ammonium sulfate, where species richness increased sharply with increasing soil pH. The addition of phosphorus reduced species richness, and application of potassium along with phosphorus reduced species richness further, but the biggest negative effects were when nitrogen and phosphorus were applied together. The analysis demonstrates how multiple factors contribute to the observed diversity patterns and how environmental regulation of species pools can operate at the same spatial and temporal scale as biomass effects
Intransitivity and coexistence in four species cyclic games
Intransitivity is a property of connected, oriented graphs representing
species interactions that may drive their coexistence even in the presence of
competition, the standard example being the three species Rock-Paper-Scissors
game. We consider here a generalization with four species, the minimum number
of species allowing other interactions beyond the single loop (one predator,
one prey). We show that, contrary to the mean field prediction, on a square
lattice the model presents a transition, as the parameter setting the rate at
which one species invades another changes, from a coexistence to a state in
which one species gets extinct. Such a dependence on the invasion rates shows
that the interaction graph structure alone is not enough to predict the outcome
of such models. In addition, different invasion rates permit to tune the level
of transitiveness, indicating that for the coexistence of all species to
persist, there must be a minimum amount of intransitivity.Comment: Final, published versio
Paracrine effects of transplanted myoblasts and relaxin on post-infarction heart remodeling
In the post-infarcted heart, grafting of precursor cells may partially restore heart function but the improvement is modest and the mechanisms involved remain to be elucidated. Here, we explored this issue by transplanting C2C12 myoblasts, genetically engineered to express enhanced green fluorescent protein (eGFP) or eGFP and the cardiotropic hormone relaxin (RLX) through coronary venous route to swine with experimental chronic myocardial infarction. The rationale was to deliver constant, biologically effective levels of RLX at the site of cell engraftment. One month after engraftment, histological analysis showed that C2C12 myoblasts selectively settled in the ischaemic scar and were located around blood vessels showing an activated endothelium (ICAM-1-,VCAM-positive). C2C12 myoblasts did not trans-differentiate towards a cardiac phenotype, but did induce extracellular matrix remodelling by the secretion of matrix metalloproteases (MMP) and increase microvessel density through the expression of vascular endothelial growth factor (VEGF). Relaxin-producing C2C12 myoblasts displayed greater efficacy to engraft the post-ischaemic scar and to induce extracellular matrix re-modelling and angiogenesis as compared with the control cells. By echocardio-graphy, C2C12-engrafted swine showed improved heart contractility compared with the ungrafted controls, especially those producing RLX. We suggest that the beneficial effects of myoblast grafting on cardiac function are primarily dependent on the paracrine effects of transplanted cells on extracellular matrix remodelling and vascularization. The combined treatment with myoblast transplantation and local RLX production may be helpful in preventing deleterious cardiac remodelling and may hold therapeutic possibility for post-infarcted patients
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