Using compound earcons to represent hierarchies

Previous research on non-speech audio messages called <i>earcons</i> showed that they could provide powerful navigation cues in menu hierarchies. This work used <i>hierarchical</i> earcons. In this paper we suggest <i>compound</i> earcons provide a more flexible method for presenting this information. A set of sounds was created to represent the numbers 0-4 and dot. Sounds could then be created for any node in a hierarchy by concatenating these simple sounds. A hierarchy of four levels and 27 nodes was constructed. An experiment was conducted in which participants had to identify their location in the hierarchy by listening to an earcon. Results showed that participants could identify their location with over 97% accuracy, significantly better than with hierarchical earcons. Participants were also able to recognise previously unheard earcons with over 97% accuracy. These results showed that compound earcons are an effective way of representing hierarchies in sound

A new proportionality-based back-calculation approach, which employs traditional forms of growth equations, improves estimates of length at age

The performance of a new proportionality-based back-calculation approach, describing the relationship among length, otolith size, and age using traditional growth curves and assuming a bivariate distribution of deviations from those curves, was evaluated. Cross-validation was used for six teleost species to compare predictions of expected lengths or otolith sizes at age, given otolith size or length, respectively, with those of other proportionality-based approaches that incorporate age. For four species, and particularly Acanthopagrus butcheri when using a biological intercept, better estimates were produced using the new model than were produced using the regression equations in the other back-calculation approaches. Back-calculated lengths for A. butcheri estimated using this model were more consistent with observed lengths, particularly when employing a biological intercept, than those obtained using other proportionality-based approaches and also a constraint-based approach known to produce reliable estimates. By selecting somatic and otolith growth curves from a suite of alternatives to better describe the relationships among length, otolith size, and age, the new approach is likely to produce more reliable estimates of back-calculated length for other species

Assessing restoration potential of a critically endangered vegetation type following alien acacia removal

The Fynbos vegetation of the Cape Lowlands is ecologically distinct from mountain Fynbos within the Cape Region of South Africa, but has been highly impacted by agriculture and urban development, while alien plants have invaded most of the remaining natural habitats. Cape Flats Sand Fynbos is a critically endangered lowland vegetation type containing many endemic and threatened species. 100 ha of this vegetation type which was invaded by alien Acacia saligna was cleared in 2012. The standard clearing methods utilised in Lowland Fynbos have resulted in poor native vegetation recovery. Therefore this study aimed to test novel passive (burning) and active (seed sowing) treatments on recovery of native vegetation. After two years all treatments resulted in different recovery trajectories, and modelling treatment responses showed these trajectories to be maintained in the long-term. The passive clearing without burning treatment resulted in herbaceous vegetation dominating, while the active treatment resulted in higher cover, species richness and density of non-sprouting shrubs. A follow-up sowing treatment involving seed pre-treated with smoke and heat improved shrub species richness and seedling density of certain species, especially Thamnochortus punctatus, a dominant structural component species. Therefore an active treatment involving sowing pre-treated seeds after clearing and burning results in best Fynbos recovery compared to either of the passive treatments tested. These restoration methods should be adaptable to other lowland vegetation types within the Fynbos region as well as other Mediterranean climate regions

Active seed sowing can overcome constraints to passive restoration of a critically endangered vegetation type

Invasive alien plants negatively impact ecosystems, but recovery of native vegetation may fail following standard methods of alien species removal alone. Alternative management actions may thus be required. Cape Flats Sand Fynbos is a critically endangered vegetation type in the Cape Floristic Region of South Africa which is threatened by Acacia saligna invasion, but standard clearing methods have failed to restore native vegetation structure. A restoration study was performed comparing passive treatments i.e. clearing without burning (stack-block) versus clearing and burning (burn-block), as well as active intervention by sowing seeds of native species, either initially after burning or a year later, in which seeds were either not pre-treated or pre-treated with smoke and heat exposure before sowing. After two years all treatments resulted in different recovery trajectories, although none resembled the reference condition. Clearing without burning facilitated recovery in less degraded areas with higher initial native shrub cover, but otherwise resulted in limited vegetation recovery. Limited recovery facilitated secondary invasion by herbaceous weeds. Active seed sowing resulted in the highest recovery of native shrub cover and diversity. These findings suggest that passive restoration is constrained by seed limitation, due to the lack of recovery of vegetation components under passive clearing treatment. Active sowing was able to partially overcome this constraint through improved recovery of total shrub cover. However, non-sprouting shrub cover was higher while resprouting shrubs and species of Restionaceae were lower compared to the reference condition. Pre-treatment of seeds before sowing improved establishment of some species. Active treatment involving sowing pre-treated seeds after clearing and burning therefore resulted in best fynbos recovery compared to either of the passive treatments tested. A decision tree has been developed based on these findings in order to guide best protocol for managers

Differential changes in production measures for an estuarine-resident sparid in deep and shallow waters following increases in hypoxia

This study determined how productivity measures for a fish species in different water depths of an estuary changed in response to the increase in hypoxia in deep waters, which had previously been shown to occur between 1993–95 and 2007–11. Annual data on length and age compositions, body mass, growth, abundance, biomass, production and production to biomass ratio (P/B) were thus determined for the estuarine-resident Acanthopagrus butcheri in nearshore shallow (<2 m) and offshore deep waters (2–6 m) of the upper Swan River Estuary in those two periods. Length and age compositions imply that the increase in hypoxia was accompanied by the distribution of the majority of the older and larger A. butcheri changing from deep to shallow waters, where the small fish typically reside. Annual densities, biomass and production in shallow waters of <0.02 fish m−2, 2–4 g m−2 and ∼2 g m−2 y−1 in the earlier period were far lower than the 0.1–0.2 fish m−2, 8–15 g m−2 and 5–10 g m−2 y−1 in the later period, whereas the reverse trend occurred in deep waters, with values of 6–9 fish net−1, 2000–3900 g net−1, 900–1700 g net−1 y−1 in the earlier period vs < 1.5 fish net−1, ∼110 g net−1 and 27–45 g net−1 y−1 in the later period. Within the later period, and in contrast to the trends with annual abundance and biomass, the production in shallow waters was least during 2008/09, rather than greatest, reflecting the slow growth in that particularly cool year. The presence of substantial aggregations of both small and large fish in shallow waters accounts for the abundance, biomass and production in those waters increasing between those periods and thus, through a density-dependent effect, provide a basis for the overall reduction in growth. In marked contrast to the trends with the other three production measures, annual production to biomass ratios (P/B) in shallow waters in the two years in the earlier period, and in three of the four years of the later period, fell within the same range, i.e. 0.6–0.9 y−1, but was only 0.2 y−1 in 2008/09, reflecting the poor growth in that year. This emphasises the need to obtain data on P/B for a number of years when considering the implications of the typical P/B for a species in an estuary, in which environmental conditions and the growth of a species can fluctuate markedly between years

Marked deleterious changes in the condition, growth and maturity schedules of Acanthopagrus butcheri (Sparidae) in an estuary reflect environmental degradation

As Acanthopagrus butcheri typically completes its life within its natal estuary and possesses plastic biological characteristics, it provides an excellent model for exploring the ways and extent to which a fish species can respond to environmental changes over time. The environment of the Swan River Estuary in south-western Australia has deteriorated markedly during the last two decades, reflecting the effects of increasing eutrophication and hypoxia in the upper regions, where A. butcheri spends most of the year and spawns. In this study, the biological characteristics of A. butcheri in 2007-11 were determined and compared with those in 1993-95. Between these two periods, the condition factor for females and males of A. butcheri across their length ranges declined by 6 and 5%, respectively, and the parameters k and L∞ in the von Bertalanffy growth curves of both sexes underwent marked reductions. The predicted lengths of females and males at all ages ≥1 year were less in 2007-11 than in 1993-95 and by over 30% less at ages 3 and 6. The ogives relating maturity to length and age typically differed between 1993-94 and 2007-10. The L50s of 156 mm for females and 155 mm for males in 2007-10 were less than the corresponding values of 174 and 172 mm in 1993-94, whereas the A50s of 2.5 years for both females and males in 2007-10 were greater than the corresponding values of 1.9 and 2.0 years in 1993-94. The above trends in condition, growth and maturity parameters between periods are consistent with hypotheses regarding the effects of increasing hypoxia on A. butcheri in offshore, deeper waters. However, as the density of A. butcheri declined in offshore, deeper waters and increased markedly in nearshore, shallow waters, density-dependent effects in the latter waters, although better oxygenated, also probably contributed to the overall reductions in growth and thus to the changes in the lengths and ages at maturity

The Water–Amorphous Calcium Carbonate Interface and Its Interactions with Amino Acids

Amorphous calcium carbonate is often the first phase to precipitate during the mineralisation of calcium carbonate, before the formation of one of the crystalline polymorphs. In vivo, this phase is believed to be essential for the manufacture of minerals displaying non-equilibrium morphologies. The precipitation of this, usually transient, phase and its subsequent transformation into one of the crystalline polymorphs can be controlled by organic molecules. Here, we present a series of Molecular Dynamics simulations that explore the amorphous calcium carbonate – water interface, the attachment of amino acids onto both hydrous and anhydrous amorphous calcium carbonate and their effect on the surface. The results show that surface ions have a different coordination number distribution from bulk ions and can diffuse up to two orders of magnitude faster than their bulk counterparts, suggesting that crystallisation is much more likely to occur in this region. All the amino acids investigated bind to the amorphous calcium carbonate surfaces. However, acidic amino acids have a clear preference for the surface of amorphous CaCO3.H2O. The favoured mode of interaction of the amino acids is through amine and/or guanidine moieties. The important ramifications of the results for our understanding of protein-mineral interactions are discussed

Using simulation to understand the structure and properties of hydrated amorphous calcium carbonate

We report results from studies using four different protocols to prepare hydrated amorphous calcium carbonate, ranging from random initial structures to melting hydrated mineral structures. All protocols give good agreement with experimental X-ray structure factors. However, the thermodynamic properties, ion coordination environments, and distribution of water for the structures produced by the protocols show statistically significant variation depending on the protocols used. We discuss the diffusivity of water through the various structures and its relation to experiments. We show that one protocol (based on melting ikaite) gives a structure where the water is mobile, due to the presence of porosity in the amorphous structure. We conclude that our models of hydrated amorphous calcium carbonate do give a range of behaviour that resembles that observed experimentally, although the variation is less marked in the simulations than in experiments

Probing the Deuteron at Very Large Internal Momenta

We measure 2H(e,e′p)n cross sections at 4-momentum transfers of Q2 = 4.5 ± 0.5   (GeV/c)2 over a range of neutron recoil momenta pr, reaching up to ∼1.0  GeV/c. We obtain data at fixed neutron recoil angles θnq = 35°, 45°, and 75° with respect to the 3-momentum transfer →q. The new data agree well with previous data, which reached pr ∼ 500  MeV/c. At θnq = 35° and 45°, final state interactions, meson exchange currents, and isobar currents are suppressed and the plane wave impulse approximation provides the dominant cross section contribution. We compare the new data to recent theoretical calculations, where we observe a significant discrepancy for recoil momenta pr \u3e 700  MeV/c

A qualitative investigation of decision making during help-seeking for adult hearing loss

Objective: The Any Qualified Provider framework in the National Health Service has changed the way adult audiology services are offered in England. Under the new rules, patients are being offered a choice in geographical location and audiology provider. This study aimed to explore how choices in treatment are presented and to identify what information patients need when they are seeking help with hearing loss. Design: This study adopted qualitative methods of ethnographic observations and focus group interviews to identify information needed prior to, and during, help-seeking. Observational data and focus group data were analysed using the constant comparison method of grounded theory. Study sample: Participants were recruited from a community Health and Social Care Trust in the west of England. This service incorporates both an Audiology and a Hearing Therapy service. Twenty seven participants were involved in focus groups or interviews. Results: Participants receive little information beyond the detail of hearing aids. Participants report little information that was not directly related to uptake of hearing aids. Conclusions: Participant preferences were not explored and limited information resulted in decisions that were clinician-led. The gaps in information reflect previous data on clinician communication and highlight the need for consistent information on a range of interventions to manage hearing loss