Genotypic and phenotypic variation among Staphylococcus saprophyticus from human and animal isolates

<p>Abstract</p> <p>Background</p> <p>The main aim of this study was to examine the genotypic and phenotypic diversity of <it>Staphylococcus saprophyticus </it>isolates from human and animal origin.</p> <p>Findings</p> <p>In total, 236 clinical isolates and 15 animal isolates of <it>S. saprophyticus </it>were characterized in respect of the occurrence of 9 potential virulence genes and four surface properties. All strains were PCR positive for the regulatory genes <it>agr</it>, <it>sar</it>>it>A and <it>rot </it>as well as for the surface proteins UafA and Aas. Nearly 90% of the clinical isolates were found to possess the gene for the surface-associated lipase Ssp and 10% for the collagen binding MSCRAMM SdrI. All animal isolates were negative for<it>sdrI</it>. Lipolytic activity could be detected in 66% of the clinical and 46% of the animal isolates. Adherence to collagen type I was shown of 20% of the clinical strains and 6% of the strains of animal origin. Most <it>S. saprophyticus </it>strains showed hydrophobic properties and only few could agglutinate sheep erythrocytes.</p> <p>Conclusions</p> <p>We described a broad analysis of animal and human <it>S. saprophyticus </it>isolates regarding virulence genes and phenotypic properties such as lipase activity, hydrophobicity, and adherence. While <it>S. saprophyticus </it>strains from animal sources have prerequisites for colonization of the urinary tract like the D-serine-deaminase, out findings suggested that they need to acquire new genes e.g. MSCRAMMS for adherence like sdrI and to modulate their existing properties e.g. increasing the lipase activity or reducing hydrophobicity. These apparently important new genes or properties for virulence have to be further analyzed.</p

On the Mathematics of the Law of Mass Action

In 1864,Waage and Guldberg formulated the "law of mass action." Since that time, chemists, chemical engineers, physicists and mathematicians have amassed a great deal of knowledge on the topic. In our view, sufficient understanding has been acquired to warrant a formal mathematical consolidation. A major goal of this consolidation is to solidify the mathematical foundations of mass action chemistry -- to provide precise definitions, elucidate what can now be proved, and indicate what is only conjectured. In addition, we believe that the law of mass action is of intrinsic mathematical interest and should be made available in a form that might transcend its application to chemistry alone. We present the law of mass action in the context of a dynamical theory of sets of binomials over the complex numbers.Comment: 40 pages, no figure

A convex polynomial that is not sos-convex

A multivariate polynomial $p(x)=p(x_1,...,x_n)$ is sos-convex if its Hessian $H(x)$ can be factored as $H(x)= M^T(x) M(x)$ with a possibly nonsquare polynomial matrix $M(x)$. It is easy to see that sos-convexity is a sufficient condition for convexity of $p(x)$. Moreover, the problem of deciding sos-convexity of a polynomial can be cast as the feasibility of a semidefinite program, which can be solved efficiently. Motivated by this computational tractability, it has been recently speculated whether sos-convexity is also a necessary condition for convexity of polynomials. In this paper, we give a negative answer to this question by presenting an explicit example of a trivariate homogeneous polynomial of degree eight that is convex but not sos-convex. Interestingly, our example is found with software using sum of squares programming techniques and the duality theory of semidefinite optimization. As a byproduct of our numerical procedure, we obtain a simple method for searching over a restricted family of nonnegative polynomials that are not sums of squares.Comment: 15 page

Direct Determination of Fission-Barrier Heights Using Light-Ion Transfer in Inverse Kinematics

We demonstrate a new technique for obtaining fission data for nuclei away from $\beta$-stability. These types of data are pertinent to the astrophysical \textit{r-}process, crucial to a complete understanding of the origin of the heavy elements, and for developing a predictive model of fission. These data are also important considerations for terrestrial applications related to power generation and safeguarding. Experimentally, such data are scarce due to the difficulties in producing the actinide targets of interest. The solenoidal-spectrometer technique, commonly used to study nucleon-transfer reactions in inverse kinematics, has been applied to the case of transfer-induced fission as a means to deduce the fission-barrier height, among other variables. The fission-barrier height of $^{239}$U has been determined via the $^{238}$U($d$,$pf$) reaction in inverse kinematics, the results of which are consistent with existing neutron-induced fission data indicating the validity of the technique

A Polynomial Optimization Approach to Constant Rebalanced Portfolio Selection

We address the multi-period portfolio optimization problem with the constant rebalancing strategy. This problem is formulated as a polynomial optimization problem (POP) by using a mean-variance criterion. In order to solve the POPs of high degree, we develop a cutting-plane algorithm based on semidefinite programming. Our algorithm can solve problems that can not be handled by any of known polynomial optimization solvers.

Probing the quadrupole transition strength of C15 via deuteron inelastic scattering

Deuteron elastic scattering from $^{15}$C and inelastic scattering reactions to the first excited state of $^{15}$C were studied using a radioactive beam of $^{15}$C in inverse kinematics. The scattered deuterons were measured using HELIOS. The elastic scattering differential cross sections were analyzed using the optical model. A matter deformation length δd = 1.04(11) fm has been extracted from the differential cross sections of inelastic scattering to the first excited state. The ratio of neutron and proton matrix elements Mn/Mp = 3.6(4) has been determined from this quadrupole transition. Neutron effective charges and core-polarization parameters of $^{15}$C were determined and discussed. Results from ab initio no-core configuration interaction calculations were also compared with the experimental observations. This result supports a moderate core decoupling effect of the valence neutron in $^{15}$C similarly to its isotone $^{17}$O, in line with the interpretation of other neutron-rich carbon isotopes.Deuteron elastic scattering from 15C and inelastic scattering reactions to the first excited state of 15C were studied using a radioactive beam of 15C in inverse kinematics. The scattered deuterons were measured using HELIOS. The elastic scattering differential cross sections were analyzed using the optical model. A matter deformation length δd = 1.04(11) fm has been extracted from the differential cross sections of inelastic scattering to the first excited state. The ratio of neutron and proton matrix elements Mn/Mp = 3.6(4) has been determined from this quadrupole transition. Neutron effective charges and core-polarization parameters of 15C were determined and discussed. Results from ab-initio no-core configuration interaction calculations were also compared with the experimental observations. This result supports a moderate core decoupling effect of the valence neutron in 15C similarly to its isotone 17O, in line with the interpretation of other neutron-rich carbon isotopes

Shape coexistence in Hg-178

Lifetime measurements of excited states in Hg-178 have been performed using the Rh-103(Kr-78, p2n) reaction at a beam energy of 354 MeV. The recoil-decay tagging (RDT) technique was applied to select the Hg-178 nuclei and associate the prompt gamma rays with the correlated characteristic ground-state alpha decay. Lifetimes of the four lowest yrast states of Hg-178 have been determined using the recoil distance Doppler-shift (RDDS) method. The experimental data are compared to theoretical predictions with focus on shape coexistence. The results confirm the shift of the deformed prolate structures to higher lying states but also indicate their increasing deformation with decreasing neutron number.Peer reviewe

Evolution of the nuclear spin-orbit splitting explored via the ³²Si<i>(d,p)</i>³³Si reaction using SOLARIS

The spin-orbit splitting between neutron 1p orbitals at 33Si has been deduced using the single-neutron-adding (d,p) reaction in inverse kinematics with a beam of 32Si, a long-lived radioisotope. Reaction products were analyzed by the newly implemented SOLARIS spectrometer at the reaccelerated-beam facility at the National Superconducting Cyclotron Laboratory. The measurements show reasonable agreement with shell-model calculations that incorporate modern cross-shell interactions, but they contradict the prediction of proton density depletion based on relativistic mean-field theory. The evolution of the neutron 1p-shell orbitals is systematically studied using the present and existing data in the isotonic chains of = 17, 19, and 21. In each case, a smooth decrease in the separation of the - orbitals is seen as the respective p-orbitals approach zero binding, suggesting that the finite nuclear potential strongly influences the evolution of nuclear structure in this region

Confirmation of a new resonance in 26Si and contribution of classical novae to the galactic abundance of 26Al

© 2023 The Author(s). Published by the American Physical Society. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY), https://creativecommons.org/licenses/by/4.0/The 25Al(p ,γ ) reaction has long been highlighted as a possible means to bypass the production of 26Al cosmic γ rays in classical nova explosions. However, uncertainties in the properties of key resonant states in 26Si have hindered our ability to accurately model the influence of this reaction in such environments. We report on a detailed γ -ray spectroscopy study of 26Si and present evidence for the existence of a new, likely ℓ =1 , resonance in the 25Al + p system at Er=153.9 (15 ) keV. This state is now expected to provide the dominant contribution to the 25Al(p ,γ ) stellar reaction rate over the temperature range, T ≈0.1 −0.2 GK. Despite a significant increase in the rate at low temperatures, we find that the final ejected abundance of 26Al from classical novae remains largely unaffected even if the reaction rate is artificially increased by a factor of 10. Based on new, galactic chemical evolution calculations, we estimate that the maximum contribution of novae to the observed galactic abundance of 26Al is ≈0.2 M⊙ . Finally, we briefly highlight the important role that super-asymptotic giant branch stars may play in the production of 26Al.Peer reviewe