Breathers in inhomogeneous nonlinear lattices: an analysis via centre manifold reduction

We consider an infinite chain of particles linearly coupled to their nearest neighbours and subject to an anharmonic local potential. The chain is assumed weakly inhomogeneous. We look for small amplitude discrete breathers. The problem is reformulated as a nonautonomous recurrence in a space of time-periodic functions, where the dynamics is considered along the discrete spatial coordinate. We show that small amplitude oscillations are determined by finite-dimensional nonautonomous mappings, whose dimension depends on the solutions frequency. We consider the case of two-dimensional reduced mappings, which occurs for frequencies close to the edges of the phonon band. For an homogeneous chain, the reduced map is autonomous and reversible, and bifurcations of reversible homoclinics or heteroclinic solutions are found for appropriate parameter values. These orbits correspond respectively to discrete breathers, or dark breathers superposed on a spatially extended standing wave. Breather existence is shown in some cases for any value of the coupling constant, which generalizes an existence result obtained by MacKay and Aubry at small coupling. For an inhomogeneous chain the study of the nonautonomous reduced map is in general far more involved. For the principal part of the reduced recurrence, using the assumption of weak inhomogeneity, we show that homoclinics to 0 exist when the image of the unstable manifold under a linear transformation intersects the stable manifold. This provides a geometrical understanding of tangent bifurcations of discrete breathers. The case of a mass impurity is studied in detail, and our geometrical analysis is successfully compared with direct numerical simulations

Bright and dark breathers in Fermi-Pasta-Ulam lattices

In this paper we study the existence and linear stability of bright and dark breathers in one-dimensional FPU lattices. On the one hand, we test the range of validity of a recent breathers existence proof [G. James, {\em C. R. Acad. Sci. Paris}, 332, Ser. 1, pp. 581 (2001)] using numerical computations. Approximate analytical expressions for small amplitude bright and dark breathers are found to fit very well exact numerical solutions even far from the top of the phonon band. On the other hand, we study numerically large amplitude breathers non predicted in the above cited reference. In particular, for a class of asymmetric FPU potentials we find an energy threshold for the existence of exact discrete breathers, which is a relatively unexplored phenomenon in one-dimensional lattices. Bright and dark breathers superposed on a uniformly stressed static configuration are also investigated.Comment: 11 pages, 16 figure

Linear response in the uniformly heated granular gas

We analyse the linear response properties of the uniformly heated granular gas. The intensity of the stochastic driving fixes the value of the granular temperature in the non-equilibrium steady state reached by the system. Here, we investigate two specific situations. First, we look into the ``direct'' relaxation of the system after a single (small) jump of the driving intensity. This study is carried out by two different methods. Not only do we linearise the evolution equations around the steady state, but also derive generalised out-of-equilibrium fluctuation-dissipation relations for the relevant response functions. Second, we investigate the behaviour of the system in a more complex experiment, specifically a Kovacs-like protocol with two jumps in the driving. The emergence of anomalous Kovacs response is explained in terms of the properties of the direct relaxation function: it is the second mode changing sign at the critical value of the inelasticity that demarcates anomalous from normal behaviour. The analytical results are compared with numerical simulations of the kinetic equation, and a good agreement is found.Comment: 14 pages, 10 figures; major revision; completely new section on non-equilibrium FDR; accepted for publication in PR

Collective Coordinates Theory for Discrete Soliton Ratchets in the sine-Gordon Model

A collective coordinate theory is develop for soliton ratchets in the damped discrete sine-Gordon model driven by a biharmonic force. An ansatz with two collective coordinates, namely the center and the width of the soliton, is assumed as an approximated solution of the discrete non-linear equation. The evolution of these two collective coordinates, obtained by means of the Generalized Travelling Wave Method, explains the mechanism underlying the soliton ratchet and captures qualitatively all the main features of this phenomenon. The theory accounts for the existence of a non-zero depinning threshold, the non-sinusoidal behaviour of the average velocity as a function of the difference phase between the harmonics of the driver, the non-monotonic dependence of the average velocity on the damping and the existence of non-transporting regimes beyond the depinning threshold. In particular it provides a good description of the intriguing and complex pattern of subspaces corresponding to different dynamical regimes in parameter space

Non-equilibrium memory effects: granular fluids and beyond

In this perspective paper, we look into memory effects in out-of-equilibrium systems. To be concrete, we exemplify memory effects with the paradigmatic case of granular fluids, although extensions to other contexts such as molecular fluids with non-linear drag are also considered. The focus is put on two archetypal memory effects: the Kovacs and Mpemba effects. In brief, the first is related to imperfectly reaching a steady state -- either equilibrium or non-equilibrium, whereas the second is related to reaching a steady state faster despite starting further. Connections to optimal control theory thus naturally emerge and are briefly discussed.Comment: Perspective paper for EPL, 7 pages, 6 figure

Breathers in a system with helicity and dipole interaction

Recent papers that have studied variants of the Peyrard-Bishop model for DNA, have taken into account the long range interaction due to the dipole moments of the hydrogen bonds between base pairs. In these models the helicity of the double strand is not considered. In this particular paper we have performed an analysis of the influence of the helicity on the properties of static and moving breathers in a Klein--Gordon chain with dipole-dipole interaction. It has been found that the helicity enlarges the range of existence and stability of static breathers, although this effect is small for a typical helical structure of DNA. However the effect of the orientation of the dipole moments is considerably higher with transcendental consequences for the existence of mobile breathers.Comment: 4pages, 5 eps figure

Simple model with facilitated dynamics for granular compaction

A simple lattice model is used to study compaction in granular media. As in real experiments, we consider a series of taps separated by large enough waiting times. The relaxation of the density exhibits the characteristic inverse logarithmic law. Moreover, we have been able to identify analytically the relevant time scale, leading to a relaxation law independent of the specific values of the parameters. Also, an expression for the asymptotic density reached in the compaction process has been derived. The theoretical predictions agree fairly well with the results from the Monte Carlo simulation.Comment: 15 pages, 4 figures, REVTeX file; no changes except for single-spacing to save paper (previous version 22 pages

Investigating the impact of poverty on colonization and infection with drug-resistant organisms in humans: a systematic review

Background Poverty increases the risk of contracting infectious diseases and therefore exposure to antibiotics. Yet there is lacking evidence on the relationship between income and non-income dimensions of poverty and antimicrobial resistance. Investigating such relationship would strengthen antimicrobial stewardship interventions. Methods A systematic review was conducted following Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines. PubMed, Ovid, MEDLINE, EMBASE, Scopus, CINAHL, PsychINFO, EBSCO, HMIC, and Web of Science databases were searched in October 2016. Prospective and retrospective studies reporting on income or non-income dimensions of poverty and their influence on colonisation or infection with antimicrobial-resistant organisms were retrieved. Study quality was assessed with the Integrated quality criteria for review of multiple study designs (ICROMS) tool. Results Nineteen articles were reviewed. Crowding and homelessness were associated with antimicrobial resistance in community and hospital patients. In high-income countries, low income was associated with Streptococcus pneumoniae and Acinetobacter baumannii resistance and a seven-fold higher infection rate. In low-income countries the findings on this relation were contradictory. Lack of education was linked to resistant S. pneumoniae and Escherichia coli. Two papers explored the relation between water and sanitation and antimicrobial resistance in low-income settings. Conclusions Despite methodological limitations, the results suggest that addressing social determinants of poverty worldwide remains a crucial yet neglected step towards preventing antimicrobial resistance

Energy funneling in a bent chain of Morse oscillators with long-range coupling

A bent chain of coupled Morse oscillators with long-range dispersive interaction is considered. Moving localized excitations may be trapped in the bending region. Thus chain geometry acts like an impurity. An energy funneling effect is observed in the case of random initial conditions.Comment: 6 pages, 12 figures. Submitted to Physical Review E, Oct. 13, 200