Spanish Artifacts from Santa Elena

This volume contains Parts I and 2 of a three-part presentation of the artifacts relating to the sixteenth century Spanish occupation of the colonial capital of La Florida at Santa Elena, located on Parris Island, South Carolina from 1566 to 1587. Part 1, by Stanley South, with contributions by Eugene Lyon, Richard Polhemus, William Radisch and Carl Steen, comprises the Spanish non-ceramic artifacts. Part 2, by Russell Skowronek, Richard Johnson and Stanley South, examines the Spanish imported ceramics. Part 3, incomplete at this writing, by Chester Depratter, deals with the Spanish-contemporary Indian pottery. This third part will be published as a separate volume at a later date. The entire artifact inventory of the artifacts from Santa Elena is presented in this three-part volume, being those recovered from a number of expeditions to the site between 1979 and 1985. For comparative use the appendices contain the tabulated artifact inventory resulting from these expeditions. Synthesizing tables from these data are presented in the text. This information should prove useful to students of sixteenth century Spanish colonial history, particularly historical archaeologists involved in excavating sites of this period wherever they may be.https://scholarcommons.sc.edu/archanth_anthro_studies/1008/thumbnail.jp

Simulation of Malaria Transmission among Households in a Thai Village using Remotely Sensed Parameters

We have used discrete-event simulation to model the malaria transmission in a Thailand village with approximately 700 residents. Specifically, we model the detailed interactions among the vector life cycle, sporogonic cycle and human infection cycle under the explicit influences of selected extrinsic and intrinsic factors. Some of the meteorological and environmental parameters used in the simulation are derived from Tropical Rainfall Measuring Mission and the Ikonos satellite data. Parameters used in the simulations reflect the realistic condition of the village, including the locations and sizes of the households, ages and estimated immunity of the residents, presence of farm animals, and locations of larval habitats. Larval habitats include the actual locations where larvae were collected and the probable locations based on satellite data. The output of the simulation includes the individual infection status and the quantities normally observed in field studies, such as mosquito biting rates, sporozoite infection rates, gametocyte prevalence and incidence. Simulated transmission under homogeneous environmental condition was compared with that predicted by a SEIR model. Sensitivity of the output with respect to some extrinsic and intrinsic factors was investigated. Results were compared with mosquito vector and human malaria data acquired over 4.5 years (June 1999 - January 2004) in Kong Mong Tha, a remote village in Kanchanaburi Province, western Thailand. The simulation method is useful for testing transmission hypotheses, estimating the efficacy of insecticide applications, assessing the impacts of nonimmune immigrants, and predicting the effects of socioeconomic, environmental and climatic changes

Evolutionary innovation and diversification of carotenoid-based pigmentation in finches

© 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution. The ornaments used by animals to mediate social interactions are diverse, and by reconstructing their evolutionary pathways we can gain new insights into the mechanisms underlying ornamental innovation and variability. Here, we examine variation in plumage carotenoids among the true finches (Aves: Fringillidae) using biochemical and comparative phylogenetic analyses to reconstruct the evolutionary history of carotenoid states and evaluate competing models of carotenoid evolution. Our comparative analyses reveal that the most likely ancestor of finches used dietary carotenoids as yellow plumage colorants, and that the ability to metabolically modify dietary carotenoids into more complex pigments arose secondarily once finches began to use modified carotenoids to create red plumage. Following the evolutionary “innovation” that enabled modified red carotenoid pigments to be deposited as plumage colorants, many finch species subsequently modified carotenoid biochemical pathways to create yellow plumage. However, no reversions to dietary carotenoids were observed. The finding that ornaments and their underlying mechanisms may be operating under different selection regimes—where ornamental trait colors undergo frequent reversions (e.g., between red and yellow plumage) while carotenoid metabolization mechanisms are more conserved—supports a growing empirical framework suggesting different evolutionary patterns for ornaments and the mechanistic innovations that facilitate their diversification

Collider Signatures of the N=3 Lee-Wick Standard Model

Inspired by the Lee-Wick higher-derivative approach to quantum field theory, Grinstein, O'Connell, and Wise have illustrated the utility of introducing into the Standard Model negative-norm states that cancel quadratic divergences in loop diagrams, thus posing a potential resolution of the hierarchy problem. Subsequent work has shown that consistency with electroweak precision parameters requires many of the partner states to be too massive to be detected at the LHC. We consider the phenomenology of a yet-higher derivative theory that exhibits three poles in its bare propagators (hence N=3), whose states alternate in norm. We examine the interference effects of W boson partners on LHC scattering cross sections, and find that the N=3 LWSM already makes verifiable predictions at 10 fb^(-1) of integrated luminosity.Comment: 15 pages, 4 PDF figures. Version accepted for publication by JHE

Advancing the application, quality and harmonization of implementation science measures

BACKGROUND: The field of implementation science (IS) encompasses a broad range of constructs and uses measures from a variety of disciplines. However, there has been little standardization of measures or agreement on definitions of constructs across different studies, fields, authors, or research groups. METHODS: We describe a collaborative, web-based activity using the United States National Cancer Institute’s (NCI) Grid-Enabled Measures (GEM) portal that uses a wiki platform to focus discussion and engage the research community to enhance the quality and harmonization of measures for IS health-related research and practice. We present the history, process, and preliminary data from the GEM Dissemination & Implementation (D&I) Campaign on IS measurement. RESULTS: The GEM D&I Campaign has been ongoing for eight weeks as of this writing, and has used a combination of expert opinion and crowd-sourcing approaches. To date it has listed definitions for 45 constructs and summarized information on 120 measures. Usage of the website peaked at a rate of 124 views from 89 visitors on week seven. Users from seven countries have contributed measures and/or constructs, shared experience in using different measures, contributed comments, and identified research gaps and needs. CONCLUSION: Thus far, this campaign has provided information about different IS measures, their associated characteristics, and comments. The next step is to rate these measures for quality and practicality. This resource and ongoing activity have potential to advance the quality and harmonization of IS measures and constructs, and we invite readers to contribute to the process

Early Th2 inflammation in the upper respiratory mucosa as a predictor of severe COVID-19 and modulation by early treatment with inhaled corticosteroids: A mechanistic analysis

Background: Community-based clinical trials of the inhaled corticosteroid budesonide in early COVID-19 have shown improved patient outcomes. We aimed to understand the inflammatory mechanism of budesonide in the treatment of early COVID-19. Methods: The STOIC trial was a randomised, open label, parallel group, phase 2 clinical intervention trial where patients were randomly assigned (1:1) to receive usual care (as needed antipyretics were only available treatment) or inhaled budesonide at a dose of 800 μg twice a day plus usual care. For this experimental analysis, we investigated the nasal mucosal inflammatory response in patients recruited to the STOIC trial and in a cohort of SARS-CoV-2-negative healthy controls, recruited from a long-term observational data collection study at the University of Oxford. In patients with SARS-CoV-2 who entered the STOIC study, nasal epithelial lining fluid was sampled at day of randomisation (day 0) and at day 14 following randomisation, blood samples were also collected at day 28 after randomisation. Nasal epithelial lining fluid and blood samples were collected from the SARS-CoV-2 negative control cohort. Inflammatory mediators in the nasal epithelial lining fluid and blood were assessed for a range of viral response proteins, and innate and adaptive response markers using Meso Scale Discovery enzyme linked immunoassay panels. These samples were used to investigate the evolution of inflammation in the early COVID-19 disease course and assess the effect of budesonide on inflammation. Findings: 146 participants were recruited in the STOIC trial (n=73 in the usual care group; n=73 in the budesonide group). 140 nasal mucosal samples were available at day 0 (randomisation) and 122 samples at day 14. At day 28, whole blood was collected from 123 participants (62 in the budesonide group and 61 in the usual care group). 20 blood or nasal samples were collected from healthy controls. In early COVID-19 disease, there was an enhanced inflammatory airway response with the induction of an anti-viral and T-helper 1 and 2 (Th1/2) inflammatory response compared with healthy individuals. Individuals with COVID-19 who clinically deteriorated (ie, who met the primary outcome) showed an early blunted respiratory interferon response and pronounced and persistent Th2 inflammation, mediated by CC chemokine ligand (CCL)-24, compared with those with COVID-19 who did not clinically deteriorate. Over time, the natural course of COVID-19 showed persistently high respiratory interferon concentrations and elevated concentrations of the eosinophil chemokine, CCL-11, despite clinical symptom improvement. There was persistent systemic inflammation after 28 days following COVID-19, including elevated concentrations of interleukin (IL)-6, tumour necrosis factor-α, and CCL-11. Budesonide treatment modulated inflammation in the nose and blood and was shown to decrease IL-33 and increase CCL17. The STOIC trial was registered with ClinicalTrials.gov, NCT04416399. Interpretation: An initial blunted interferon response and heightened T-helper 2 inflammatory response in the respiratory tract following SARS-CoV-2 infection could be a biomarker for predicting the development of severe COVID-19 disease. The clinical benefit of inhaled budesonide in early COVID-19 is likely to be as a consequence of its inflammatory modulatory effect, suggesting efficacy by reducing epithelial damage and an improved T-cell response

TFTR 60 GHz alpha particle collective Thomson scattering diagnostic

A 60 GHz gyrotron collective Thomson Scattering alpha particle diagnostic has been implemented for the D-T period on TFM. Gyrotron power of 0.1-1 kW in pulses of up to 1 second can be launched in X-mode. Efficient corrugated waveguides are used with antennaes and vacuum windows of the TFTR Microwave Scattering system. A multichannel synchronous detector receiver system and spectrum analyzer acquire the scattered signals. A 200 Megasample/sec digitizer is used to resolve fine structure in the frequency spectrum. By scattering nearly perpendicular to the magnetic field, this experiment will take advantage of an enhancement of the scattered signal which results from the interaction of the alpha particles with plasma resonances in the lower hybrid frequency range. Significant enhancements are expected, which will make these measurements possible with gyrotron power less than 1 kW, while maintaining an acceptable signal to noise ratio. We hope to extract alpha particle density and velocity distribution functions from the data. The D and T fuel densities and temperatures may also be obtainable by measurement of the respective ion cyclotron harmonic frequencies