Phylogenetic Investigation of the Aliphatic, Non-hydrolyzable Biopolymer Algaenan, with a Focus on Green Algae

Algaenan, an aliphatic biopolymer found in various microalgae, has been implicated as the source of a sizable proportion of the aliphatic refractory organic matter in sedimentary rocks. Because of its recalcitrant nature, algaenan is thought to be preserved selectively in the formation of kerogen and microfossils. Its taxonomic distribution in organisms has not been studied in detail or in a phylogenetic context. Here, we evaluate the distribution and phylogenetic relationships of algaenan-producing organisms from a broad, eukaryote-wide perspective down to the level of genus and species. We focus on the kingdom Plantae, as most described algaenan producers belong to this superkingdom. The phylogenetic distribution of algaenan producers within the Plantae is actually quite limited and a detailed phylogenetic analysis of the two classes that include all green algal algaenan producers suggests that there is no finer-grained pattern of phylogenetic distribution to the production of this biopolymer. Our results suggest that the biopolymer is not widespread ecologically or phylogenetically, is not found abundantly in marine organisms and likely represents a functional description of molecular class, rather than a biomarker for green algae. This adds to a growing body of literature that questions the selective preservation hypothesis for insoluble organic matter and calls for a more detailed chemical and structural analysis of algaenan.Organismic and Evolutionary Biolog

Microbial controls on net production of nitrous oxide in a denitrifying woodchip bioreactor

Denitrifying woodchip bioreactors are potential low-cost technologies for the removal of nitrate (NO3-) in water through denitrification. However, if environmental conditions do not support microbial communities performing complete denitrification, other N transformation processes will occur, resulting in the export of nitrite (NO2-), nitrous oxide (N2O), or ammonium (NH4+). To identify the factors controlling the relative accumulation of NO2-, N2O, and/or NH4+ in denitrifying woodchip bioreactors, porewater samples were collected over two operational years from a denitrifying woodchip bioreactor designed for removing NO3- from mine water. Woodchip samples were collected at the end of the operational period. Changes in the abundances of functional genes involved in denitrification, N2O reduction, and dissimilatory NO3- reduction to NH4+ were correlated with porewater chemistry and temperature. Temporal changes in the abundance of the denitrification gene nirS were significantly correlated with increases in porewater N2O concentrations and indicated the preferential selection of incomplete denitrifying pathways ending with N2O. Temperature and the total organic carbon/NO3- ratio were strongly correlated with NH4+ concentrations and inversely correlated with the ratio between denitrification genes and the genes indicative of ammonification (sigma nir/nrfA), suggesting an environmental control on NO3- transformations. Overall, our results for a denitrifying woodchip bioreactor operated at hydraulic residence times of 1.0-2.6 d demonstrate the temporal development in the microbial community and indicate an increased potential for N2O emissions with time from the denitrifying woodchip bioreactor

Book Reviews

Reviews of the following books: Big House, Little House, Back House, Barn: The Connected Farm Buildings of New England by Thomas C. Hubka; American Farm Families and the Houses: Vernacular Design and Social Change in the Rural North by Sally McMurry; History of Islesboro, Maine, 1893-1983 by the Islesboro Historical Society; Thomas Lefebvre et le fief Kouesanouskek by Honorius Provost, ptre. Translated by Shirley P. Barrett; Rebuilding the Pulp and Paper Workers’ Union, 1933-1961 by Robert H. Ziege

How effective is the retention of microplastics in horizontal flow sand filters treating stormwater?

Microplastics accumulate in stormwater and can ultimately enter freshwater recipients, and pose a serious risk to aquatic life. This study investigated the effectiveness of lab-scale horizontal flow sand filters of differing lengths (25, 50 and 100 cm) in retaining four types of thermoplastic microplastics commonly occurring in stormwater runoff (polyamide, polyethylene, polypropylene, and polyethylene terephthalate). Despite the differences in particle shape, size and density, the study revealed that more than 98% of the spiked microplastics were retained in all filters, with a slightly increased removal with increased filter length. At a flow rate of 1 mL/min and after one week of operation, 62–84% of the added microplastics agglomerated in the first 2 cm of the filters. The agglomerated microplastics included 96% of high-density fibers. Larger-sized particles were retained in the sand media, while microplastics smaller than 50 μm were more often detected in the effluent. Microplastics were quantified and identified using imaging based micro Fourier Transform Infrared Spectroscopy. The efficient retention of microplastics in low-flow horizontal sand filters, demonstrated by the results, highlights their potential importance for stormwater management. This retention is facilitated by various factors, including microplastic agglomeration, particle sedimentation of heavy fibers and favorable particle-to-media size ratios.</p

The Union-Nonunion Wage Differential: A Replication and Extension

This is the author's accepted manuscript, made available with the permission of the publisher.The research here was supported by the Office of Construction Industry Services, U.S. Department of Labor. Hugh Conway and Tom Mobley of that Office were especially helpful. Conclusions drawn and opinions expressed are those of the authors and do not represent the position of the U.S. Department of Labor or any of its officials. The authors would like to thank an anonymous referee for comments on an earlier draft. Fred Cleaver, formerly of the Center for Public Affairs, University of Kansas, assisted in data processing

Selective inhibition of pancreatic ductal adenocarcinoma cell growth by the mitotic MPS1 kinase inhibitor NMS-P715

Most solid tumors, including pancreatic ductal adenocarcinoma (PDAC), exhibit structural and numerical chromosome instability (CIN). Although often implicated as a driver of tumor progression and drug resistance, CIN also reduces cell fitness and poses a vulnerability that can be exploited therapeutically. The spindle assembly checkpoint (SAC) ensures correct chromosome-microtubule attachment, thereby minimizing chromosome segregation errors. Many tumors exhibit upregulation of SAC components such as MPS1, which may help contain CIN within survivable limits. Prior studies showed that MPS1 inhibition with the small molecule NMS-P715 limits tumor growth in xenograft models. In cancer cell lines, NMS-P715 causes cell death associated with impaired SAC function and increased chromosome missegregation. Although normal cells appeared more resistant, effects on stem cells, which are the dose-limiting toxicity of most chemotherapeutics, were not examined. Elevated expression of 70 genes (CIN70), including MPS1, provides a surrogate measure of CIN and predicts poor patient survival in multiple tumor types. Our new findings show that the degree of CIN70 upregulation varies considerably among PDAC tumors, with higher CIN70 gene expression predictive of poor outcome. We identified a 25 gene subset (PDAC CIN25) whose overexpression was most strongly correlated with poor survival and included MPS1. In vitro, growth of human and murine PDAC cells is inhibited by NMS-P715 treatment, whereas adipose-derived human mesenchymal stem cells are relatively resistant and maintain chromosome stability upon exposure to NMS-P715. These studies suggest that NMS-P715 could have a favorable therapeutic index and warrant further investigation of MPS1 inhibition as a new PDAC treatment strategy

Evaluation Research and Institutional Pressures: Challenges in Public-Nonprofit Contracting

This article examines the connection between program evaluation research and decision-making by public managers. Drawing on neo-institutional theory, a framework is presented for diagnosing the pressures and conditions that lead alternatively toward or away the rational use of evaluation research. Three cases of public-nonprofit contracting for the delivery of major programs are presented to clarify the way coercive, mimetic, and normative pressures interfere with a sound connection being made between research and implementation. The article concludes by considering how public managers can respond to the isomorphic pressures in their environment that make it hard to act on data relating to program performance.This publication is Hauser Center Working Paper No. 23. The Hauser Center Working Paper Series was launched during the summer of 2000. The Series enables the Hauser Center to share with a broad audience important works-in-progress written by Hauser Center scholars and researchers

An inhibitor of the mitotic kinase, MPS1, is selective towards pancreatic cancer cells

poster abstractThe abysmal five year pancreatic cancer survival rate of less than 6% highlights the need for new treatments for this deadly malignancy. Cytotoxic drugs normally target rapidly dividing cancer cells but unfortunately often target stem cells resulting in toxicity. This warrants the development of compounds that selectively target tumor cells. An inhibitor of the mitotic kinase, MPS1, which has been shown to be more selective towards cancer cells than non-tumorigenic cells, shows promise but its effects on stem cells has not been investigated. MPS1 is an essential component of the Spindle Assembly Checkpoint and is proposed to be up-regulated in cancer cells to maintain chromosomal segregation errors within survivable limits. Inhibition of MPS1 kinase causes cancer cell death accompanied by massive aneuploidy. Our studies demonstrate that human adipose stem cells (ASCs) and can tolerate higher levels of a small molecule MPS1 inhibitor than pancreatic cancer cells. In contrast to PANC-1 cancer cells, ASCs and telomerase-immortalized pancreatic ductal epithelial cells did not exhibit elevated chromosome mis-segregation after treatment with the MPS1 inhibitor for 72hrs. In contrast, PANC-1 pancreatic cancer cells exhibited a large increase in chromosomal mis-segregation under similar conditions. Furthermore, growth of ASCs was minimally affected post treatment whereas PANC-1 cells were severely growth impaired suggesting a favorable therapeutic index. Our studies, demonstrate that MPS1 inhibition is selective towards pancreatic cancer cells and that stem cells are less affected in vitro. These data suggest MPS1 inhibition should be further investigated as a new treatment approach in pancreatic cancer