Shikimate pathway in apicomplexan parasites

No abstract available

Spatial variability in the growth of invasive European barbel Barbus barbus in the River Severn basin, revealed using anglers as citizen scientists

Life history trait analyses of non-native fishes help identify how novel populations respond to different habitat typologies. Here, using electric fishing and anglers as citizen scientists, scales were collected from the invasive barbel Barbus barbus population from four reaches of the River Severn and Teme, western England. Angler samples were biased towards larger fish, with the smallest fish captured being 410 mm, whereas electric fishing sampled fish down to 60 mm. Scale ageing revealed fish present to over 20 years old in both rivers. Juvenile growth rates were similar across all reaches. Lengths at the last annulus and Linfinity of the von Bertalanffy growth model revealed, however, that fish grew to significantly larger body sizes in a relatively deep and highly impounded reach of the River Severn. Anglers thus supplemented the scale collection and although samples remained limited in number, they provided considerable insights into the spatial demographics of this invasive B. barbus population

Modelling groundwater/surface-water interaction in a managed riparian chalk valley wetland

Understanding hydrological processes in wetlands may be complicated by management practices and complex groundwater/surface water interactions. This is especially true for wetlands underlain by permeable geology, such as chalk. In this study, the physically based, distributed model MIKE SHE is used to simulate hydrological processes at the Centre for Ecology and Hydrology River Lambourn Observatory, Boxford, Berkshire, UK. This comprises a 10-ha lowland, chalk valley bottom, riparian wetland designated for its conservation value and scientific interest. Channel management and a compound geology exert important, but to date not completely understood, influences upon hydrological conditions. Model calibration and validation were based upon comparisons of observed and simulated groundwater heads and channel stages over an equally split 20-month period. Model results are generally consistent with field observations and include short-term responses to events as well as longer-term seasonal trends. An intrinsic difficulty in representing compressible, anisotropic soils limited otherwise excellent performance in some areas. Hydrological processes in the wetland are dominated by the interaction between groundwater and surface water. Channel stage provides head boundaries for broad water levels across the wetland, whilst areas of groundwater upwelling control discrete head elevations. A relic surface drainage network confines flooding extents and routes seepage to the main channels. In-channel macrophyte growth and its management have an acute effect on water levels and the proportional contribution of groundwater and surface water. The implications of model results for management of conservation species and their associated habitats are discusse

Projecting impacts of climate change on habitat availability in a macrophyte dominated chalk river

Climate change will impact fluvial ecosystems through changes in the flow regime. Physical habitat is an established measure of a river's ecological status when assessing changes to flow. Yet, it requires extensive datasets, is site specific, and does not account for dynamic processes; shortcomings that the use of hydrological and hydraulic models may alleviate. Here, simulated flows along a 600 m reach of the River Lambourn, Boxford, UK, were extracted from the 1D MIKE 11 hydraulic component of an integrated MIKE SHE model of the Centre for Ecology & Hydrology River Lambourn Observatory. In-channel seasonal macrophyte growth and management through cutting alter water levels, represented in the hydraulic model by manipulating channel bed roughness (Manning's n). Assessment of climate change used outputs from the UK Climate Projections 2009 ensemble of global climate models for the 2080s. River discharge outputs were disaggregated to provide velocity and depth profiles across 41 cross sections along the reach. These were integrated with habitat suitability criteria for brown trout (Salmo trutta) to generate a measure of available physical habitat. The influence of macrophyte growth caused the habitat-discharge relationship to be unusable in evaluating the sensitivity of brown trout to flow changes. Instead, projected time series were used to show an overall reduction in habitat availability, more for adult than juvenile trout. Results highlighted the impact of weed cutting, and its potential role in mitigating both flood risk and the ecological impacts of climate change. The use of a hydraulic model to assess physical habitat availability has worldwide applicability

The impossible regularization of the Nambu Jona-Lasinio model with vector interactions

We show that the procedure of regularizing the real part of the euclidean action, while leaving the imaginary part unregularized, leads to a non-analytic and highly singular functional of the fields. It is customary to work with an imaginary time component of the vector field, in order to avoid regularization of the anomalous processes. We show that this procedure is flawed by the fact that a stationary point of the action occurs for a real, not imaginary, time component of the vector field. Furthermore the action in the vicinity of the stationary point is singular. The regularized action is thus not suitable for an evaluation of the partition function using a saddle point method. We discuss proposed solutions to this problem, as well as other regularizations. They all lead to practical problems.Comment: 13 pages in Latex, available from [email protected]

Masses of ground and excited-state hadrons

We present the first Dyson-Schwinger equation calculation of the light hadron spectrum that simultaneously correlates the masses of meson and baryon ground- and excited-states within a single framework. At the core of our analysis is a symmetry-preserving treatment of a vector-vector contact interaction. In comparison with relevant quantities the root-mean-square-relative-error/degree-of freedom is 13%. Notable amongst our results is agreement between the computed baryon masses and the bare masses employed in modern dynamical coupled-channels models of pion-nucleon reactions. Our analysis provides insight into numerous aspects of baryon structure; e.g., relationships between the nucleon and Delta masses and those of the dressed-quark and diquark correlations they contain.Comment: 25 pages, 7 figures, 4 table

Determining the Gluon Distributions in the Proton and Photon from Two-Jet Production at HERA

Two-jet production from the direct photon contribution at HERA is a sensitive measure of the small-$x$ gluon in the proton. We propose measurements of ratios of the jet cross-sections which will clearly distinguish between gluons with or without singular behaviour at small $x$. Furthermore, we show that analogous ratio measurements for the resolved photon contribution provide a sensitive way of determining the gluon distribution in the photon.Comment: Rutherford Appleton Laboratory report RAL-93-071 7 pages 3 figs Fig2 and Fig3 included as psfile

Nonperturbative Renormalization and the QCD Vacuum

We present a self consistent approach to Coulomb gauge Hamiltonian QCD which allows one to relate single gluon spectral properties to the long range behavior of the confining interaction. Nonperturbative renormalization is discussed. The numerical results are in good agreement with phenomenological and lattice forms of the static potential.Comment: 23 pages in RevTex, 4 postscript figure

Strange Stars with a Density-Dependent Bag Parameter

We have studied strange quark stars in the framework of the MIT bag model, allowing the bag parameter B to depend on the density of the medium. We have also studied the effect of Cooper pairing among quarks, on the stellar structure. Comparison of these two effects shows that the former is generally more significant. We studied the resulting equation of state of the quark matter, stellar mass-radius relation, mass-central-density relation, radius-central-density relation, and the variation of the density as a function of the distance from the centre of the star. We found that the density-dependent B allows stars with larger masses and radii, due to stiffening of the equation of state. Interestingly, certain stellar configurations are found to be possible only if B depends on the density. We have also studied the effect of variation of the superconducting gap parameter on our results.Comment: 23 pages, 8 figs; v2: 25 pages, 9 figs, version to be published in Phys. Rev. (D

SO(10) unified models and soft leptogenesis

Motivated by the fact that, in some realistic models combining SO(10) GUTs and flavour symmetries, it is not possible to achieve the required baryon asymmetry through the CP asymmetry generated in the decay of right-handed neutrinos, we take a fresh look on how deep this connection is in SO(10). The common characteristics of these models are that they use the see-saw with right-handed neutrinos, predict a normal hierarchy of masses for the neutrinos observed in oscillating experiments and in the basis where the right-handed Majorana mass is diagonal, the charged lepton mixings are tiny. In addition these models link the up-quark Yukawa matrix to the neutrino Yukawa matrix Y^\nu with the special feature of Y^\nu_{11}-> 0 Using this condition, we find that the required baryon asymmetry of the Universe can be explained by the soft leptogenesis using the soft B parameter of the second lightest right-handed neutrino whose mass turns out to be around 10^8 GeV. It is pointed out that a natural way to do so is to use no-scale supergravity where the value of B ~1 GeV is set through gauge-loop corrections.Comment: 26 pages, 2 figures. Added references, new appendix of a relevant fit and improved comment