Astronomical Distance Determination in the Space Age: Secondary Distance Indicators

The formal division of the distance indicators into primary and secondary leads to difficulties in description of methods which can actually be used in two ways: with, and without the support of the other methods for scaling. Thus instead of concentrating on the scaling requirement we concentrate on all methods of distance determination to extragalactic sources which are designated, at least formally, to use for individual sources. Among those, the Supernovae Ia is clearly the leader due to its enormous success in determination of the expansion rate of the Universe. However, new methods are rapidly developing, and there is also a progress in more traditional methods. We give a general overview of the methods but we mostly concentrate on the most recent developments in each field, and future expectations. © 2018, The Author(s)

Bacterial DNA is present in the fetal intestine and overlaps with that in the placenta in mice

Bacterial DNA has been reported in the placenta and amniotic fluid by several independent groups of investigators. However, it's taxonomic overlap with fetal and maternal bacterial DNA in different sites has been poorly characterized. Here, we determined the presence of bacterial DNA in the intestines and placentas of fetal mice at gestational day 17 (n = 13). These were compared to newborn intestines (n = 15), maternal sites (mouth, n = 6; vagina, n = 6; colon, n = 7; feces, n = 8), and negative controls to rule out contamination. The V4 region of the bacterial 16S rRNA gene indicated a pattern of bacterial DNA in fetal intestine similar to placenta but with higher phylogenetic diversity than placenta or newborn intestine. Firmicutes were the most frequently assignable phylum. SourceTracker analysis suggested the placenta as the most commonly identifiable origin for fetal bacterial DNA, but also over 75% of fetal gut genera overlapped with maternal oral and vaginal taxa but not with maternal or newborn feces. These data provide evidence for the presence of bacterial DNA in the mouse fetus

CES medicina : órgano oficial de difusión de la Facultad de Medicina del Instituto de Ciencias de la Salud

Transcription is a complicated process which involves the interactions of promoter cis-elements with multiple trans-protein factors. The specific interactions rely not only on the specific sequence recognition between the cis- and trans-factors but also on certain spatial arrangement of the factors in a complex. The relative positioning of involved cis-elements provides the framework for such a spatial arrangement. The distance distribution between gene transcription and translation start sites (TSS-TLS) is the subject of the present study to test an assumption that over evolution, the TSS-TLS distance becomes a distinct character for a given organism. Four representative organisms (Escherichia cloi, Saccharomyces cerevisiae, Arabidopsis thaliana and Homo sapiens) were chosen to study the probability distribution of the distance TSS-TLS. The statistical results show that the distances distributions vary significantly and are not independent of species. There seems a trend of increased length of the distances from simple prokaryotic to more complicated eukaryotic organisms. With the specific distance distribution data, computational promoter prediction tools can be improved for higher accuracy

Characterisation of the flow in the molten metal sump during direct chill aluminium casting

A recent analytical model for the liquid aluminum flow in a direct chill (DC) casting sump has been investigated and the scaling coefficients evaluated. The magnitudes of flow-field features, such as the depth of the temperature stratification in the sump and the velocity of the metal in the thermal boundary layer close to the solidification front, have been calculated. The results broadly agree with recent full numerical calculations of the flow in the sump. The variation of these essential flow features has been investigated across a range of typical ingot sizes, casting speeds, and superheats, and critical macro-casting-parameter combinations have been identified. The limitations of the model are discussed and the possible effects the identified structure has on macrosegregation are briefly explored. Finally, the influence on the flow field of the method of feeding the ingot is investigated, and it is concluded that the model and these results are not invalidated if the feeding is nonuniform over the top surface of the sump

New Methods for Splice Site Recognition

Splice sites are locations in DNA which separate protein-coding regions (exons) from noncoding regions (introns). Accurate splice site detectors thus form important components of computational gene finders. We pose splice site recognition as a classification problem with the classifier learnt from a labeled data set consisting of only local information around the potential splice site. Note that finding the correct position of splice sites without using global information is a rather hard task. We analyze the genomes of the nematode Caenorhabditis elegans and of humans using specially designed support vector kernels. One of the kernels is adapted from our previous work on detecting translation initiation sites in vertebrates and another uses an extension to the well-known Fisher-kernel. We fin