Reconstruction of a conic-section surface from autocollimator-based deflectometric profilometry

We present a description of our method to process a set of autocollimator-based deflectometer 1-dimensional line-scans taken over a large optical surface and reconstruct them to a best-fit conic-section surface. The challenge with our task is that each line-scan is in a different (unknown) coordinate reference frame with respect to the other line-scans in the set. This problem arises due to the limited angular measurement range of the autocollimator used in the deflectometer and the need to measure over a greater range; this results in the optic under measurement being rotated (in pitch and roll) between each scan to bring the autocollimator back into measurement range and therefore each scan is taken in a different coordinate frame. We describe an approach using a 6N+2 dimension optimisation (where N is the number of scan lines taken across the mirror) that uses a gradient-based non-linear least squares fitting combined with a multi-start global search strategy to find the best-fit surface. Careful formulation of the problem is required to reduce numerical noise and allow the routine to converge on a solution of the required accuracy

Estimation of Boreal Forest Growing Stock Volume in Russia from Sentinel-2 MSI and Land Cover Classification

Growing stock volume (GSV) is a fundamental parameter of forests, closely related to the above-ground biomass and hence to carbon storage. Estimation of GSV at regional to global scales depends on the use of satellite remote sensing data, although accuracies are generally lower over the sparse boreal forest. This is especially true of boreal forest in Russia, for which knowledge of GSV is currently poor despite its global importance. Here we develop a new empirical method in which the primary remote sensing data source is a single summer Sentinel-2 MSI image, augmented by land-cover classification based on the same MSI image trained using MODIS-derived data. In our work the method is calibrated and validated using an extensive set of field measurements from two contrasting regions of the Russian arctic. Results show that GSV can be estimated with an RMS uncertainty of approximately 35–55%, comparable to other spaceborne estimates of low-GSV forest areas, with 70% spatial correspondence between our GSV maps and existing products derived from MODIS data. Our empirical approach requires somewhat laborious data collection when used for upscaling from field data, but could also be used to downscale global data

Remote Detection of Surge-Related Glacier Terminus Change across High Mountain Asia

High Mountain Asia (HMA) hosts the largest glacier concentration outside of polar regions. It is also distinct glaciologically as it forms one of two major surge clusters globally, and many glaciers there contradict the globally observed glacier recession trend. Surging glaciers are critical to our understanding of HMA glacier dynamics, threshold behaviour and flow instability, and hence have been the subject of extensive research, yet many dynamical uncertainties remain. Using the cloud-based geospatial data platform, Google Earth Engine (GEE) and GEE-developed tool, GEEDiT, to identify and quantify trends in the distribution and phenomenological characteristics of surging glaciers synoptically across HMA, we identified 137 glaciers as surging between 1987–2019. Of these, 55 were newly identified, 15 glaciers underwent repeat surges, and 18 were identified with enhanced glaciological hazard potential, most notably from Glacier Lake Outburst Floods (GLOFs). Terminus position time series analysis from 1987–2019 facilitated the development of a six-part phenomenological classification of glacier behaviour, as well as quantification of surge variables including active phase duration, terminus advance distance and rate, and surge periodicity. This research demonstrates the application of remote sensing techniques and the GEE platform to develop our understanding of surging glacier distribution and terminus phenomenology across large areas, as well as their ability to highlight potential geohazard locations, which can subsequently be used to focus monitoring efforts

Elevation change, mass balance, dynamics and surging of Langjökull, Iceland from 1997 to 2007

ABSTRACTGlaciers and ice caps around the world are changing quickly, with surge-type behaviour superimposed upon climatic forcing. Here, we study Iceland's second largest ice cap, Langjökull, which has both surge- and non-surge-type outlets. By differencing elevation change with surface mass balance, we estimate the contribution of ice dynamics to elevation change. We use DEMs, in situ stake measurements, regional reanalyses and a mass-balance model to calculate the vertical ice velocity. Thus, we not only compare the geodetic, modelled and glaciological mass balances, but also map spatial variations in glacier dynamics. Maps of emergence and submergence velocity successfully highlight the 1998 surge and subsequent quiescence of one of Langjökull's outlets by visualizing both source and sink areas. In addition to observing the extent of traditional surge behaviour (i.e. mass transfer from the accumulation area to the ablation area followed by recharge of the source area), we see peripheral areas where the surge impinged upon an adjacent ridge and subsequently retreated. While mass balances are largely in good agreement, discrepancies between modelled and geodetic mass balance may be explained by inaccurate estimates of precipitation, saturated adiabatic lapse rate or degree-day factors. Nevertheless, the study was ultimately able to investigate dynamic surge behaviour in the absence of in situ measurements during the surge.In situ mass balance survey is a joint effort of the Glaciology Group, Institute of Earth Sciences, University of Iceland and the National Power Company (Landsvirkjun). We thank Philippe Crochet and Tómas Jóhannesson from the Icelandic Meteorological Office for providing the gridded climate data and for useful discussions about the climatology of Langjökull. The 2007 lidar data were collected by the UK Natural Environment Research Council Airborne Research and Survey Facility (Grant IPY 07-08). Additional funding was provided by the United States National Science Foundation (Grant No. DGE-1038596), St Catharine’s, St John’s and Trinity Colleges and the University of Cambridge B.B. Roberts and Scandinavian Studies Funds. We thank Cameron Rye for initial help coding the mass balance model.This is the author accepted manuscript. The final version is available from Cambridge University Press via https://doi.org/10.1017/jog.2016.5

Elevation Change, Mass Balance, Dynamics, and Surging of Langjökull, Iceland from 1997 to 2007

Glaciers and ice caps around the world are changing quickly, with surge-type behaviour superimposed upon climatic forcing. Here, we study Iceland’s second largest ice cap, Langjökull, which has both surge- and non-surge-type outlets. By differencing elevation change with surface mass balance, we estimate the contribution of ice dynamics to elevation change. We use DEMs, in situ stake measurements, regional reanalyses, and a mass balance model to calculate the vertical ice velocity. Thus, we not only compare the geodetic, modelled, and glaciological mass balances, but also map spatial variations in glacier dynamics. Maps of emergence and submergence velocity successfully highlight the 1998 surge and subsequent quiescence of one of Langjökull’s outlets by visualizing both source and sink areas. In addition to observing the extent of traditional surge behaviour (i.e., mass transfer from the accumulation area to the ablation area followed by recharge of the source area), we see peripheral areas where the surge impinged upon an adjacent ridge and subsequently retreated. While mass balances are largely in good agreement, discrepancies between modelled and geodetic mass balance may be explained by inaccurate estimates of precipitation, saturated adiabatic lapse rate, or degree day factors. Nevertheless, the study was ultimately able to investigate dynamic surge behaviour in the absence of in situ measurements during the surge.In situ mass balance survey is a joint effort of the Glaciology Group, Institute of Earth Sciences, University of Iceland and the National Power Company (Landsvirkjun). We thank Philippe Crochet and Tómas Jóhannesson from the Icelandic Meteorological Office for providing the gridded climate data and for useful discussions about the climatology of Langjökull. The 2007 lidar data were collected by the UK Natural Environment Research Council Airborne Research and Survey Facility (Grant IPY 07-08). Additional funding was provided by the United States National Science Foundation (Grant No. DGE-1038596), St Catharine’s, St John’s and Trinity Colleges and the University of Cambridge B.B. Roberts and Scandinavian Studies Funds. We thank Cameron Rye for initial help coding the mass balance model.This is the author accepted manuscript. The final version is available from Cambridge University Press via https://doi.org/10.1017/jog.2016.5

Spectral reflectance of whale skin above the sea surface: a proposed measurement protocol

Great whales have been detected using very‐high‐resolution satellite imagery, suggesting this technology could be used to monitor whales in remote areas. However, the application of this method to whale studies is at an early developmental stage and several technical factors need to be addressed, including capacity for species differentiation and the maximum depth of detection in the water column. Both require knowledge of the spectral reflectance of the various whale species just above the sea surface, as when whales bodies break the surface of the water to breath, log or breach, there is, at times, no sea water between the whale's skin and the satellite sensor. Here we tested whether such reflectance could be measured on dead whale tissue. We measured the spectral reflectance of fresh integument collected during the bowhead subsistence harvest, and of thawed integument samples from various species obtained following strandings and stored at −20°C. We show that fresh and thawed samples of whale integument have different spectral properties. The reflectance of fresh samples was higher than the reflectance of thawed samples, as integument appears to darken after death and with time, even under frozen conditions. In this study, we present the first whale reflectance estimates (without the influence of sea water and for dead tissue). These provide a baseline for additional work, needed to advance the use of satellite imagery to monitor whales and facilitate their conservation

Is subarctic forest advance able to keep pace with climate change?

Published VersionRecent climate warming and scenarios for further warming have led to expectations of rapid movement of ecological boundaries. Here we focus on the circumarctic forest–tundra ecotone (FTE), which represents an important bioclimatic zone with feedbacks from forest advance and corresponding tundra disappearance (up to 50% loss predicted this century) driving widespread ecological and climatic changes. We address FTE advance and climate history relations over the 20th century, using FTE response data from 151 sites across the circumarctic area and site-specific climate data. Specifically, we investigate spatial uniformity of FTE advance, statistical asso ciations with 20th century climate trends, and whether advance rates match climate change velocities (CCVs). Study sites diverged into four regions (Eastern Canada; Central and Western Canada and Alaska; Siberia; and Western Eurasia) based on their climate history, although all were characterized by similar qualitative patterns of behaviour (with about half of the sites showing advancing behaviour). The main associations between climate trend variables and behaviour indicate the importance of precipitation rather than temperature for both qualitative and quantitative behav iours, and the importance of non-growing season as well as growing season months. Poleward latitudinal advance rates differed significantly among regions, being small est in Eastern Canada (~10 m/year) and largest in Western Eurasia (~100 m/year). These rates were 1–2 orders of magnitude smaller than expected if vegetation dis tribution remained in equilibrium with climate. The many biotic and abiotic factors influencing FTE behaviour make poleward advance rates matching predicted 21st century CCVs (~103–104 m/year) unlikely. The lack of empirical evidence for swift forest relocation and the discrepancy between CCV and FTE response contradict equilibrium model-based assumptions and warrant caution when assessing global change-related biotic and abiotic implications, including land–atmosphere feedbacks and carbon sequestration

Effectiveness and Safety of Adalimumab Biosimilar SB5 in IBD:Outcomes in Originator to SB5 Switch, Double Biosimilar Switch and Bio-Naieve SB5 Observational Cohorts

BACKGROUND AND AIMS: Multiple adalimumab [ADA] biosimilars are now approved for use in inflammatory bowel disease [IBD]; however, effectiveness and safety data remain scarce. We aimed to investigate long-term outcomes of the ADA biosimilar SB5 in IBD patients following a switch from the ADA originator [SB5-switch cohort] or after start of SB5 [SB5-start cohort]. METHODS: We performed an observational cohort study in a tertiary IBD referral centre. All IBD patients treated with Humira underwent an elective switch to SB5. We identified all these patients in a biological prescription database that prospectively registered all ADA start and stop dates including brand names. Data on IBD phenotype, C-reactive protein [CRP], drug persistence, ADA drug and antibody levels, and faecal calprotectin were collected. RESULTS: In total, 481 patients were treated with SB5, 256 in the SB5-switch cohort (median follow-up: 13.7 months [IQR 8.6–15.2]) and 225 in the SB5-start cohort [median follow-up: 8.3 months [4.2–12.8]). Of the SB5-switch cohort, 70.8% remained on SB5 beyond 1 year; 90/256 discontinued SB5, mainly due to adverse events [46/90] or secondary loss of response [37/90]. In the SB5-start cohort, 81/225 discontinued SB5, resulting in SB5-drug persistence of 60.3% beyond 1 year. No differences in clinical remission [p = 0.53], CRP [p = 0.80], faecal calprotectin [p = 0.40] and ADA trough levels [p = 0.55] were found between baseline, week 26 and week 52 following switch. Injection site pain was the most frequently reported adverse event. CONCLUSION: Switching from ADA originator to SB5 appeared effective and safe in this study with over 12 months of follow-up

The Interface between Li6.5La3Zr1.5Ta0.5O12 and Liquid Electrolyte

An advantageous solid electrolyte/liquid electrolyte interface is crucial for the implementation of a protected lithium anode in liquid electrolyte cells. Li6.5La3Zr1.5Ta0.5O12 (LLZTO) garnet electrolytes are among the few solid electrolytes that are stable in contact with lithium metal. We show LLZTO is unstable in contact with the organic carbonate-based Li+ liquid electrolyte used in conventional Li-ion cells. The interfacial resistance between LLZTO and LiPF6 in (CH2O)2CO: OC(OCH3)2 (1:1 v/v) increases with time due to the growth of a lithium-ion-conducting solid electrolyte interphase (SEI) at the surface of the ceramic electrolyte. The interphase is composed of Li2CO3, LiF, Li2O, and organic carbonates. Even at a rate of 5 mA cm−2, a 3 V potential drop occurs across the LLZTO/liquid electrolyte interface. A practical LLZTO membrane (thickness ∼10 μm), in contact with a lithium anode, gives a potential loss of ∼16 mV, less than 1% of the resistance of the SEI