Revision of the 'dragon-head' cusk eels of the genus Porogadus (Teleostei: Ophidiidae), with description of eight new species and one new genus

The ophidiid genus Porogadus occurs between 800 and 5300 m in the tropical and subtropical world oceans. Fifteen nominal species have been described since 1878 and most of them until 1902. The genus has been highlighted as needing revision in recent compilations about ophidiiforms and here we present the first comprehensive review. Twelve of the previously described species are here accepted as valid with two being moved to the newly established genus Tenuicephalus n. gen. that encompasses fishes differing from those of Porogadus in the extremely weak ossification, the stout head, absence of head spines and absence of the “triple” lateral line system considered typical for Porogadus and a reduced dentition. In addition, eight new species are described: Porogadus caboverdensis, P. dracocephalus, P. lacrimatus, P. mendax, P. solomonensis, P. turgidus, Tenuicephalus multitrabs and T. squamilabrus. The species of Porogadus show a distinctive depth segregation with the majority of species having a demersal bathyal life-style between 800 and 3500 m and other species being more or less exclusively restricted to abyssal depths below 3000 m. The biogeographic distribution pattern of bathyal groups shows putative species pairs in the Atlantic versus the eastern Pacific and a clear separation of eastern Pacific from Indo-West Pacific species. The geographic effects and timing are being discussed that may have led to this speciation events. Generally, we found widely distributed species that are found far away from continental masses and others restrained to continental slopes and sometimes exhibiting regionalism. In abyssal depth, the Cabo Verde and Canary basins off NW-Africa have yielded three exclusive species, but it is uncertain at this stage whether this could represent a sampling bias with this area being extensively sampled by the Discovery research vessel (BMNH) over the years from 1970–1998. Another instance of a potentially endemic abyssal species is that of Porogadus melanocephalus in the Bay of Bengal. The latter has been caught with 45 specimens in a single trawl, representing the highest number of Porogadus specimens collected in any trawl and indicating that these fishes may actually not be as rare as one might assume from the literature

Molecular, morphological and fossil input data for inferring relationship among viviparous brotulas (Bythitidae) - Resulting in a family status change for Dinematichthyidae

This article comprise the data related to the research article (Møller et al., 2016) [1], and makes it possible to explore and reproduce the topologies that allowed [1] to infer the relationship between the families Bythitidae and Dinematichthyidae. The supplementary data holds nexus-input files for the Bayesian analysis and the ‘.xml’-input files – with and without nucleotide data – that are used in the fossil-calibrated phylogenetic analysis with a relaxed clock model. The resulting topologies are provided as ‘.new’-files together with a characters matrix file for traits to trace across the inferred phylogenies. Keywords: Bythitinae, Aphyonidae, pedomorphism, Coral reef fishes, Deepsea fishes, Cave fishe

Monitoring the near-extinct European weather loach in Denmark based on environmental DNA from water samples

AbstractThe European weather loach (Misgurnus fossilis) represents one of many European freshwater fishes in decline. Efficient monitoring is essential if conservation efforts are to be successful, but due to the species’ cryptic biology, traditional monitoring methods currently in use are inefficient, time consuming and likely prone to non-detection error. Here, we investigate the usefulness of environmental DNA (eDNA) monitoring as an alternative or supplementary method for surveying the Danish weather loach population, which is presumed to consist primarily of a single group of no more than 50 individuals. In 2008, the majority of historical Danish localities were surveyed, using traditional fishing techniques. We then applied eDNA methods to a number of these, as well as other potential localities. We successfully detected the weather loach at multiple sites in the single known remaining locality; a result that was later confirmed when local managers caught eight live specimens. Furthermore, the eDNA method indicated presence of the weather loach in another historical locality, where the species has not been observed since 1995. At the remaining localities, weather loach eDNA was not detected, providing further evidence for its absence. Importantly, the eDNA survey required less effort in person-hours and lower costs than the traditional fishing survey. This study confirms that eDNA monitoring is a valid supplement to traditional monitoring methods currently applied to monitor rare freshwater fishes. We propose that by providing reliable distribution data at lower cost and limited effort, the eDNA method can allow for increased management efficiency of endangered freshwater species such as the European weather loach

Eocene relatives of cod icefishes (Perciformes: Notothenioidei) from Seymour Island, Antarctica

Fragmentary skull bones and vertebra from the Upper Eocene La Meseta Formation on Seymour (Marambio) Island, Antarctic Peninsula have been described as gadiform fishes, informally named “Mesetaichthys”. Here we describe jaws as Mesetaichthys jerzmanskae n. g. and n. sp., and refer this taxon to the perciform suborder Notothenioidei. This group is almost unknown as fossils. Similarities to the living, ‘primitive’ nototheniid Dissostichus eleginoides are indicated in the dentition. Gadiform evolution in the Paleocene-Eocene, and the possibility of a correlation between the origin and evolution of notothenioids in connection with the deterioration of the climate in Antarctica during the Late Eocene-Oligocene is discussed

Buoyancy and hydrostatic balance in a West Indian Ocean coelacanth Latimeria chalumnae

Background: Buoyancy and balance are important parameters for slow-moving, low-metabolic, aquatic organisms. The extant coelacanths have among the lowest metabolic rates of any living vertebrate and can aford little energy to keep station. Previous observations on living coelacanths support the hypothesis that the coelacanth is neutrally buoyant and in close-to-perfect hydrostatic balance. However, precise measurements of buoyancy and balance at diferent depths have never been made. Results: Here we show, using non-invasive imaging, that buoyancy of the coelacanth closely matches its depth distribution. We found that the lipid-flled fatty organ is well suited to support neutral buoyancy, and due to a closeto-perfect hydrostatic balance, simple maneuvers of fns can cause a considerable shift in torque around the pitch axis allowing the coelacanth to assume diferent body orientations with little physical efort. Conclusions: Our results demonstrate a close match between tissue composition, depth range and behavior, and our collection-based approach could be used to predict depth range of less well-studied coelacanth life stages as well as of deep sea fshes in general

A new deep-sea eelpout of the genus Pyrolycus (Teleostei: Zoarcidae) associated with a hydrothermal seep on the Pacific margin of Costa Rica

A new species of the zoarcid genus Pyrolycus Machida & Hashimoto, 2002, Pyrolycus jaco sp. nov., is described from a hydrothermal seep environment named Jacó Scar in the eastern Pacific of Costa Rica. Four specimens were collected in 2018 between 1746–1795 m among tubeworm colonies around the seep. The new species is differentiated from its two western Pacific congeners by having a shorter head, snout, jaw, and pectoral fins. It is further diagnosed by having three postorbital pores and two occipital pores. Molecular sequences of the cytochrome c oxidase I gene are provided and are the first for the genus. The character states indicating miniaturization in this species are discussed. This is the first vertebrate species known from this composite reducing ecosystem and is the fourth hydrothermally-associated zoarcid from the eastern Pacific

Environmental DNA from seawater samples correlate with trawl catches of subarctic, deepwater fishes

Remote polar and deepwater fish faunas are under pressure from ongoing climate change and increasing fishing effort. However, these fish communities are difficult to monitor for logistic and financial reasons. Currently, monitoring of marine fishes largely relies on invasive techniques such as bottom trawling, and on official reporting of global catches, which can be unreliable. Thus, there is need for alternative and non-invasive techniques for qualitative and quantitative oceanic fish surveys. Here we report environmental DNA (eDNA) metabarcoding of seawater samples from continental slope depths in Southwest Greenland. We collected seawater samples at depths of 188-918 m and compared seawater eDNA to catch data from trawling. We used Illumina sequencing of PCR products to demonstrate that eDNA reads show equivalence to fishing catch data obtained from trawling. Twenty-six families were found with both trawling and eDNA, while three families were found only with eDNA and two families were found only with trawling. Key commercial fish species for Greenland were the most abundant species in both eDNA reads and biomass catch, and interpolation of eDNA abundances between sampling sites showed good correspondence with catch sizes. Environmental DNA sequence reads from the fish assemblages correlated with biomass and abundance data obtained from trawling. Interestingly, the Greenland shark (Somniosus microcephalus) showed high abundance of eDNA reads despite only a single specimen being caught, demonstrating the relevance of the eDNA approach for large species that can probably avoid bottom trawls in most cases. Quantitative detection of marine fish using eDNA remains to be tested further to ascertain whether this technique is able to yield credible results for routine application in fisheries. Nevertheless, our study demonstrates that eDNA reads can be used as a qualitative and quantitative proxy for marine fish assemblages in deepwater oceanic habitats. This relates directly to applied fisheries as well as to monitoring effects of ongoing climate change on marine biodiversity-especially in polar ecosystems