Towards a highly scalable network tester

High end networked-systems have quickly climbed from a throughput of gigabits/sec to terabits/sec, and are approaching petabits/sec. Alas, network testing equipment has not scaled: it remained either low throughput or extremely expensive. With suitable network testing equipment either not at scale or too expensive even for commercial vendors, systems may be released without proper testing and validation. We propose a methodology for large scale testing of networked systems, based on using a low-cost open source network tester and a commodity switch. Our approach is scalable, open source, and accurate, and can be adapted to a variety of networking equipment, widely available to users.1. Leverhulme Trust Early Career Fellowship ECF-2016-289, 2. (EPSRC) EARL: sdn EnAbled MeasuRement for alL project (Project Reference EP/P025374/1)

DRY SLIDING WEAR BEHAVIOR OF DIFFUSION BONDED AZ-91 MAGNESIUM ALLOY REINFORCED WITH SIC PARTICLES

Magnesium composites reinforced with 2, 4, 6 Wt.% of silicon carbide particles at different particle size of 10, 25 and 45 mm was synthesized using diffusion bonding process. Further the samples for scanning electron microscopic analysis and tribological analysis were made from the composites. Dry sliding wear test was carried out with L27 orthogonal design array on pin on disc tribometer. Mass loss of the pins was measured and wear rate was calculated. A statistical analysis was performed with the measured wear rate, the optimal parameter combination level was identified with main effect plot. From ANOVA analysis the significant parameters was identified

An ε -Uniform Numerical Method for a System of Convection-Diffusion Equations with Discontinuous Convection Coefficients and Source Terms

In this paper, a parameter-uniform numerical method is suggested to solve a system of singularly perturbed convection-diffusion equations with discontinuous convection coefficients and source terms subject to the Dirichlet boundary condition. The second derivative of each equation is multiplied by a distinctly small parameter, which leads to an overlap and interacting interior layer. A numerical method based on a piecewise uniform Shishkin mesh is constructed. Numerical results are presented to support the theoretical results

Graphdti: A Robust Deep Learning Predictor Of Drug-Target Interactions From Multiple Heterogeneous Data

Traditional techniqueset identification, we developed GraphDTI, a robust machine learning framework integrating the molecular-level information on drugs, proteins, and binding sites with the system-level information on gene expression and protein-protein interactions. In order to properly evaluate the performance of GraphDTI, we compiled a high-quality benchmarking dataset and devised a new cluster-based cross-validation p to identify macromolecular targets for drugs utilize solely the information on a query drug and a putative target. Nonetheless, the mechanisms of action of many drugs depend not only on their binding affinity toward a single protein, but also on the signal transduction through cascades of molecular interactions leading to certain phenotypes. Although using protein-protein interaction networks and drug-perturbed gene expression profiles can facilitate system-level investigations of drug-target interactions, utilizing such large and heterogeneous data poses notable challenges. To improve the state-of-the-art in drug targrotocol. Encouragingly, GraphDTI not only yields an AUC of 0.996 against the validation dataset, but it also generalizes well to unseen data with an AUC of 0.939, significantly outperforming other predictors. Finally, selected examples of identified drug-target interactions are validated against the biomedical literature. Numerous applications of GraphDTI include the investigation of drug polypharmacological effects, side effects through off-target binding, and repositioning opportunities

Phase measurement of light absorption and scatter in human tissue

Analog and digital technologies are presented for precise measurement of propagation delay of photons from source and detector placed on portions of the human body. The goal of the apparatus design is to quantify absorption (μa) and scattering (μs′) induced by biological pigments and biological structures, respectively. Body tissues are highly scattering with a mean distance between scatterers of less than a mm (at 700-850 nm). Significant absorption is mainly due to 5%-10% of the tissue volume occupied by blood. Measurement of μa and μs′ is done by both time and frequency domain equipment. This article focuses upon frequency domain equipment because of its simplicity, reduced noise bandwidth, versatility, and the strong analogy to very high frequency/ultrahigh frequency communication devices, particularly those using phase modulation. Comparisons are made of homodyne and heterodyne systems together with evaluation of single and multiple side band systems, with particular emphasis on methods for multiplexed optical and radio frequencies by frequency encoding or time-sharing technologies. The applications of these phase modulation systems to quantitative brain and muscle blood oximetry, functional activity of the forebrain, and other important problems of medical science, are presented. © 1998 American Institute of Physics

Probabilistic Algorithmic Knowledge

The framework of algorithmic knowledge assumes that agents use deterministic knowledge algorithms to compute the facts they explicitly know. We extend the framework to allow for randomized knowledge algorithms. We then characterize the information provided by a randomized knowledge algorithm when its answers have some probability of being incorrect. We formalize this information in terms of evidence; a randomized knowledge algorithm returning ``Yes'' to a query about a fact \phi provides evidence for \phi being true. Finally, we discuss the extent to which this evidence can be used as a basis for decisions.Comment: 26 pages. A preliminary version appeared in Proc. 9th Conference on Theoretical Aspects of Rationality and Knowledge (TARK'03

The use of Raman spectroscopy to differentiate between different prostatic adenocarcinoma cell lines

Raman spectroscopy (RS) is an optical technique that provides an objective method of pathological diagnosis based on the molecular composition of tissue. Studies have shown that the technique can accurately identify and grade prostatic adenocarcinoma (CaP) in vitro. This study aimed to determine whether RS was able to differentiate between CaP cell lines of varying degrees of biological aggressiveness. Raman spectra were measured from two well-differentiated, androgen-sensitive cell lines (LNCaP and PCa 2b) and two poorly differentiated, androgen-insensitive cell lines (DU145 and PC 3). Principal component analysis was used to study the molecular differences that exist between cell lines and, in conjunction with linear discriminant analysis, was applied to 200 spectra to construct a diagnostic algorithm capable of differentiating between the different cell lines. The algorithm was able to identify the cell line of each individual cell with an overall sensitivity of 98% and a specificity of 99%. The results further demonstrate the ability of RS to differentiate between CaP samples of varying biological aggressiveness. RS shows promise for application in the diagnosis and grading of CaP in clinical practise as well as providing molecular information on CaP samples in a research setting

Solving the Parquet Equations for the Hubbard Model beyond Weak Coupling

We find that imposing the crossing symmetry in the iteration process considerably extends the range of convergence for solutions of the parquet equations for the Hubbard model. When the crossing symmetry is not imposed, the convergence of both simple iteration and more complicated continuous loading (homotopy) methods are limited to high temperatures and weak interactions. We modify the algorithm to impose the crossing symmetry without increasing the computational complexity. We also imposed time reversal and a subset of the point group symmetries, but they did not further improve the convergence. We elaborate the details of the latency hiding scheme which can significantly improve the performance in the computational implementation. With these modifications, stable solutions for the parquet equations can be obtained by iteration more quickly even for values of the interaction that are a significant fraction of the bandwidth and for temperatures that are much smaller than the bandwidth. This may represent a crucial step towards the solution of two-particle field theories for correlated electron models.Comment: 15 pages, 12 figure

Lack of association of the CIITA -168A→G promoter SNP with myasthenia gravis and its role in autoimmunity

<p>Abstract</p> <p>Background</p> <p>The major histocompatibility complex class II transactivator (CIITA) regulates MHC class II gene expression. A promoter SNP -168A→G (rs3087456) has previously been shown to be associated with susceptibility to several immune mediated disorders, including rheumatoid arthritis (RA), multiple sclerosis (MS) and myocardial infarction (MI). Myasthenia gravis (MG) is an autoimmune disorder which has previously been shown to be associated with polymorphisms of several autoimmune predisposing genes, including <it>IL-1</it>, <it>PTPN22</it>, <it>TNF-α </it>and the <it>MHC</it>. In order to determine if allelic variants of rs3087456 increase predisposition to MG, we analyzed this SNP in our Swedish cohort of 446 MG patients and 1866 controls.</p> <p>Results</p> <p>No significant association of the SNP with MG was detected, neither in the patient group as a whole, nor in any clinical subgroup. The vast majority of previous replication studies have also not found an association of the SNP with autoimmune disorders.</p> <p>Conclusions</p> <p>We thus conclude that previous findings with regard to the role of the <it>CIITA </it>-168A→G SNP in autoimmunity may have to be reconsidered.</p

Burden of typhoid and paratyphoid fever in India.

BACKGROUND: In 2017, more than half the cases of typhoid fever worldwide were projected to have occurred in India. In the absence of contemporary population-based data, it is unclear whether declining trends of hospitalization for typhoid in India reflect increased antibiotic treatment or a true reduction in infection. METHODS: From 2017 through 2020, we conducted weekly surveillance for acute febrile illness and measured the incidence of typhoid fever (as confirmed on blood culture) in a prospective cohort of children between the ages of 6 months and 14 years at three urban sites and one rural site in India. At an additional urban site and five rural sites, we combined blood-culture testing of hospitalized patients who had a fever with survey data regarding health care use to estimate incidence in the community. RESULTS: A total of 24,062 children who were enrolled in four cohorts contributed 46,959 child-years of observation. Among these children, 299 culture-confirmed typhoid cases were recorded, with an incidence per 100,000 child-years of 576 to 1173 cases in urban sites and 35 in rural Pune. The estimated incidence of typhoid fever from hospital surveillance ranged from 12 to 1622 cases per 100,000 child-years among children between the ages of 6 months and 14 years and from 108 to 970 cases per 100,000 person-years among those who were 15 years of age or older. Salmonella enterica serovar Paratyphi was isolated from 33 children, for an overall incidence of 68 cases per 100,000 child-years after adjustment for age. CONCLUSIONS: The incidence of typhoid fever in urban India remains high, with generally lower estimates of incidence in most rural areas. (Funded by the Bill and Melinda Gates Foundation; NSSEFI Clinical Trials Registry of India number, CTRI/2017/09/009719; ISRCTN registry number, ISRCTN72938224.)