Terahertz photoresponse of a quantum Hall edge-channel diode

The Teraherz (THz) photoresponse of a two-dimensional electron gas in the quantum Hall regime is investigated. We use a sample structure which is topologically equivalent to a Corbino geometry combined with a cross-gate technique. This quasi-Corbino geometry allows us to directly investigate the THz-induced transport between adjacent edge-states, thus avoiding bulk effects. We find a pronounced photo voltage at zero applied bias, which rapidly decreases when an external current bias is applied. The photo voltage and its dependence on the bias current can be described using the model of an illuminated photodiode, resulting from the reconstruction of the Landau bands at the sample edge. Using the sample as a detector in a Fourier transform spectrometer setup, we find a resonant response from which we extract a reduced effective cyclotron mass. The findings support a non-bolometric mechanism of the induced photo voltage and the proposed edge-channel diode model.Comment: 5 pages, 5 eps-figures, accepted for Phys. Rev.

The North Sea Benthos Project: planning, management and objectives

The ICES Benthos Ecology Working Group is integrating recent macrobenthic infaunal data (1999-2001) available from various sources, including national monitoring surveys, in North Sea soft bottom sediments. lt is expected to cover most of the North Sea. The main goal is an overall comparison with the North Sea Benthos Survey data of 1986, in order to determine whether there have been any significant changes and, if so, what may be the causal influences (e.g., climate change, fishing impacts). The work will contribute valuable information on several other topics such as habitat classification and the distribution of endangered species. Therefore, in addition to physico-chemical measurements of sediments samples alongside the benthic fauna, information on water depths, temperature, water quality and salinity will be incorporated in the analysis of species and community distributions. Also, we will use existing ecological and hydrographical models for currents, bottom shear stress and carbon input, along with information on the distribution of habitat types, to explain the observed distribution patterns. At the ASC, an overview of the data available will be presented as well as the anticipated outcomes, and the first steps taken to deal with taxonomic differences and other issues affecting the capability to integrate submitted information

Trends in biomass, density and diversity of North Sea macrofauna

Total biomass and biomass of large taxonomic groups (polychaetes, molluscs, crustaceans, echinoderms) and species diversity of the macrofauna were determined for almost 200 North Sea stations sampled synoptically by seven vessels during Spring 1986 and for 120 additional stations sampled in earlier years by the Marine Laboratory in Aberdeen. There exists a clear and significant decreasing trend in biomass with latitude, both in total biomass and for the different taxonomic groups. Apart from latitude, sediment composition and chlorophyll a content of the sediment also infuence total biomass and biomass of most groups significantly. Biomass increases consistently in finer sediments and sediments with a higher chlorophyll a content. The same trends are found for the results within laboratories. Some interaction exists, indicating weak laboratory and zonal effects. Diversity, as measured by Hill's diversity index N1 = (exp H′) shows a clear and significant trend with latitude. Towards the north of the North Sea diversity increases considerably. The trend is also found for laboratories separately and is everywhere equally strong. Also longitude and depth show an effect on diversity. Sediment variables have no clear influence on diversity. Other diversity measures show the same trend but are more variable than N1,. Total density tends to increase towards the north, but sediment related variables have a larger influence. Mean individual weight becomes considerably smaller towards the northern part of the North Sea

Langzeitige Änderungen des Salzgehaltes in der Unterweser

Anhand hundertjähriger Meßreihen wurden langfristige Salzgehaltsänderungen in der Unterweser und ihre möglichen Ursachen untersucht. Dabei wurde angestrebt, die natürlichen und die anthropogenen Einflüsse auf den Salzgehalt zu trennen. Trotz des unvollständigen Datensatzes konnten der Einfluß des Einzugsgebietes und Salzgehaltsschwankungen des angrenzenden Meeresgebietes nahezu eliminiert werden. Wegen der langzeitigen Änderungen der Gezeiten in der Nordsee waren genaue Aussagen über die Auswirkung der in den letzten hundert Jahren in der Unterweser durchgeführten Baumaßnahmen auf den Salzgehalt nicht möglich. Unsere Ergebnisse geben Hinweise für moderne Meßnetze zur Bestimmung der Wasserqualität

Learning biophysically-motivated parameters for alpha helix prediction

<p>Abstract</p> <p>Background</p> <p>Our goal is to develop a state-of-the-art protein secondary structure predictor, with an intuitive and biophysically-motivated energy model. We treat structure prediction as an optimization problem, using parameterizable cost functions representing biological "pseudo-energies". Machine learning methods are applied to estimate the values of the parameters to correctly predict known protein structures.</p> <p>Results</p> <p>Focusing on the prediction of alpha helices in proteins, we show that a model with 302 parameters can achieve a Q_{<it>α </it>}value of 77.6% and an SOV_{<it>α </it>}value of 73.4%. Such performance numbers are among the best for techniques that do not rely on external databases (such as multiple sequence alignments). Further, it is easier to extract biological significance from a model with so few parameters.</p> <p>Conclusion</p> <p>The method presented shows promise for the prediction of protein secondary structure. Biophysically-motivated elementary free-energies can be learned using SVM techniques to construct an energy cost function whose predictive performance rivals state-of-the-art. This method is general and can be extended beyond the all-alpha case described here.</p

Changes in North Sea macrofauna communities between 1986 and 2000

This paper is chapter 5.2 of the ICES CRR “Structure and dynamics of the North Sea benthos” (ICES 2007) compiled by the ICES Study Group on the North Sea Benthos Project 2000. The North Sea Benthos Project 2000 (NSBP) was initiated as a follow-up to the earlier 1986 ICES North Sea Benthos Survey (NSBS). One major aim of the NSBP 2000 was to compare the outcome with that of the 1986 NSBS, in order to identify any significant changes in the community structure and their likely causes. In general, the spatial distribution of the macrofaunal communities in 2000 was rather similar to that in 1986. But changes were found within communities which were addressed to changes in the hydroclimate caused by changes in the North Atlantic Oscillation influencing changes in currents and sediment structure as well as food availability

The Application of DNA Barcodes for the Identification of Marine Crustaceans from the North Sea and Adjacent Regions

During the last years DNA barcoding has become a popular method of choice for molecular specimen identification. Here we present a comprehensive DNA barcode library of various crustacean taxa found in the North Sea, one of the most extensively studied marine regions of the world. Our data set includes 1,332 barcodes covering 205 species, including taxa of the Amphipoda, Copepoda, Decapoda, Isopoda, Thecostraca, and others. This dataset represents the most extensive DNA barcode library of the Crustacea in terms of species number to date. By using the Barcode of Life Data Systems (BOLD), unique BINs were identified for 198 (96.6%) of the analyzed species. Six species were characterized by two BINs (2.9%), and three BINs were found for the amphipod species Gammarus salinus Spooner, 1947 (0.4%). Intraspecific distances with values higher than 2.2% were revealed for 13 species (6.3%). Exceptionally high distances of up to 14.87% between two distinct but monophyletic clusters were found for the parasitic copepod Caligus elongatus Nordmann, 1832, supporting the results of previous studies that indicated the existence of an overlooked sea louse species. In contrast to these high distances, haplotype-sharing was observed for two decapod spider crab species, Macropodia parva Van Noort & Adema, 1985 and Macropodia rostrata (Linnaeus, 1761), underlining the need for a taxonomic revision of both species. Summarizing the results, our study confirms the application of DNA barcodes as highly effective identification system for the analyzed marine crustaceans of the North Sea and represents an important milestone for modern biodiversity assessment studies using barcode sequence

The Effect of Carbon Credits on Savanna Land Management and Priorities for Biodiversity Conservation

Carbon finance offers the potential to change land management and conservation planning priorities. We develop a novel approach to planning for improved land management to conserve biodiversity while utilizing potential revenue from carbon biosequestration. We apply our approach in northern Australia's tropical savanna, a region of global significance for biodiversity and carbon storage, both of which are threatened by current fire and grazing regimes. Our approach aims to identify priority locations for protecting species and vegetation communities by retaining existing vegetation and managing fire and grazing regimes at a minimum cost. We explore the impact of accounting for potential carbon revenue (using a carbon price of US$14 per tonne of carbon dioxide equivalent) on priority areas for conservation and the impact of explicitly protecting carbon stocks in addition to biodiversity. Our results show that improved management can potentially raise approximately US$5 per hectare per year in carbon revenue and prevent the release of 1–2 billion tonnes of carbon dioxide equivalent over approximately 90 years. This revenue could be used to reduce the costs of improved land management by three quarters or double the number of biodiversity targets achieved and meet carbon storage targets for the same cost. These results are based on generalised cost and carbon data; more comprehensive applications will rely on fine scale, site-specific data and a supportive policy environment. Our research illustrates that the duel objective of conserving biodiversity and reducing the release of greenhouse gases offers important opportunities for cost-effective land management investments