314 research outputs found
Tropical race 4: Current and future impact on export and subsistence banana production.
Norman Simmonds classified fusarium wilt of banana, caused by F. oxysporum f. sp. cubense (FOC), as one of the most destructive plant diseases. Susceptibility to race 1 of FOCdoomed 'Gros Michel,' the banana cultivar on which the first export trades were based; it was replaced by race 1-resistant Cavendish clones by the 19605.Trabalhos apresentados no: APS-IPPC 2011 Joint Meeting in Honolulu, Hawaii, August 6-10, 2011
A study of wrist-worn activity measurement as a potential real-world biomarker for late-life depression.
BACKGROUND: Late-life depression (LLD) is associated with a decline in physical activity. Typically this is assessed by self-report questionnaires and, more recently, with actigraphy. We sought to explore the utility of a bespoke activity monitor to characterize activity profiles in LLD more precisely. METHOD: The activity monitor was worn for 7 days by 29 adults with LLD and 30 healthy controls. Subjects underwent neuropsychological assessment and quality of life (QoL) (36-item Short-Form Health Survey) and activities of daily living (ADL) scales (Instrumental Activities of Daily Living Scale) were administered. RESULTS: Physical activity was significantly reduced in LLD compared with controls (t = 3.63, p < 0.001), primarily in the morning. LLD subjects showed slower fine motor movements (t = 3.49, p < 0.001). In LLD patients, activity reductions were related to reduced ADL (r = 0.61, p < 0.001), lower QoL (r = 0.65, p < 0.001), associative learning (r = 0.40, p = 0.036), and higher Montgomery-Åsberg Depression Rating Scale score (r = -0.37, p < 0.05). CONCLUSIONS: Patients with LLD had a significant reduction in general physical activity compared with healthy controls. Assessment of specific activity parameters further revealed the correlates of impairments associated with LLD. Our study suggests that novel wearable technology has the potential to provide an objective way of monitoring real-world function.This study was funded by an award from the UK
Medical Research Council (G1001828/1)
PD disease state assessment in naturalistic environments using deep learning
Management of Parkinson's Disease (PD) could be improved significantly if reliable, objective information about fluctuations in disease severity can be obtained in ecologically valid surroundings such as the private home. Although automatic assessment in PD has been studied extensively, so far no approach has been devised that is useful for clinical practice. Analysis approaches common for the field lack the capability of exploiting data from realistic environments, which represents a major barrier towards practical assessment systems. The very unreliable and infrequent labelling of ambiguous, low resolution movement data collected in such environments represents a very challenging analysis setting, where advances would have significant societal impact in our ageing population. In this work we propose an assessment system that abides practical usability constraints and applies deep learning to differentiate disease state in data collected in naturalistic settings. Based on a large data-set collected from 34 people with PD we illustrate that deep learning outperforms other approaches in generalisation performance, despite the unreliable labelling characteristic for this problem setting, and how such systems could improve current clinical practice
The TANAMI Program
TANAMI (Tracking Active Galactic Nuclei with Austral Milliarcsecond
Interferometry) is a monitoring program to study the parsec-scale structures
and dynamics of relativistic jets in active galactic nuclei (AGN) of the
Southern Hemisphere with the Long Baseline Array and associated telescopes.
Extragalactic jets south of -30 degrees declination are observed at 8.4 GHz and
22 GHz every two months at milliarcsecond resolution. The initial TANAMI sample
is a hybrid radio and gamma-ray selected sample since the combination of VLBI
and gamma-ray observations is crucial to understand the broadband emission
characteristics of AGN.Comment: Confernce Proceedings for "X-ray Astronomy 2009" (Bologna), 3 pages,
3 figures, needs cls-fil
Current status of the taxonomic position of Fusarium oxysporum formae specialis cubense within the Fusarium oxysporum complex
Fusarium oxysporum is an asexual fungal species that includes human and animal pathogens and a
diverse range of nonpathogens. Pathogenic and nonpathogenic strains of this species can be
distinguished from each other with pathogenicity tests, but not with morphological analysis or sexual
compatibility studies. Substantial genetic diversity among isolates has led to the realization that F.
oxysporum represents a complex of cryptic species. F. oxysporum f. sp cubense (Foc), causal agent of
Fusariumwilt of banana, is one of the more than 150 plant pathogenic forms of F. oxysporum.Multi-gene
phylogenetic studies of Foc revealed at least eight phylogenetic lineages, a finding that was supported by
random amplified polymorphic DNAs, restriction fragment length polymorphisms and amplified
fragment length polymorphisms. Most of these lineages consist of isolates in closely related vegetative
compatibility groups, some of which possess opposite mating type alleles, MAT-1 and MAT-2; thus, the
evolutionary history of this fungus may have included recent sexual reproduction. The ability to cause
disease on all or some of the current race differential cultivars has evolved convergently in the taxon, as
members of some races appear in different phylogenetic lineages. Therefore, various factors including
co-evolution the plant host and horizontal gene transfer are thought to have shaped the evolutionary
history of Foc. This review discusses the evolution of Foc as a model formae specialis in F. oxysporum in
relation to recent research findings involving DNA-based studies.http://www.elsevier.com/locate/meegi
First Report of Fusarium oxysporum f. sp. cubense (Foc) Tropical Race 4 associated with Panama disease ofbanana outside Southeast Asia
Petunia Floral Defensins with Unique Prodomains as Novel Candidates for Development of Fusarium Wilt Resistance in Transgenic Banana Plants
Antimicrobial peptides are a potent group of defense active molecules that have been utilized in developing resistance against a multitude of plant pathogens. Floral defensins constitute a group of cysteine-rich peptides showing potent growth inhibition of pathogenic filamentous fungi especially Fusarium oxysporum in vitro. Full length genes coding for two Petunia floral defensins, PhDef1 and PhDef2 having unique C- terminal 31 and 27 amino acid long predicted prodomains, were overexpressed in transgenic banana plants using embryogenic cells as explants for Agrobacterium–mediated genetic transformation. High level constitutive expression of these defensins in elite banana cv. Rasthali led to significant resistance against infection of Fusarium oxysporum f. sp. cubense as shown by in vitro and ex vivo bioassay studies. Transgenic banana lines expressing either of the two defensins were clearly less chlorotic and had significantly less infestation and discoloration in the vital corm region of the plant as compared to untransformed controls. Transgenic banana plants expressing high level of full-length PhDef1 and PhDef2 were phenotypically normal and no stunting was observed. In conclusion, our results suggest that high-level constitutive expression of floral defensins having distinctive prodomains is an efficient strategy for development of fungal resistance in economically important fruit crops like banana
Wristband accelerometers to motivate arm exercise after stroke (WAVES): study protocol for a pilot randomized controlled trial
BACKGROUND: Loss of upper limb function affects up to 85 % of acute stroke patients. Recovery of upper limb function requires regular intensive practise of specific upper limb tasks. To enhance intensity of practice interventions are being developed to encourage patients to undertake self-directed exercise practice. Most interventions do not translate well into everyday activities and stroke patients continue to find it difficult remembering integration of upper limb movements into daily activities. A wrist-worn device has been developed that monitors and provides ‘live’ upper limb activity feedback to remind patients to use their stroke arm in daily activities (The CueS wristband). The aim of this trial is to assess the feasibility of a multi-centre, observer blind, pilot randomised controlled trial of the CueS wristband in clinical stroke services. METHODS/DESIGN: This pilot randomised controlled feasibility trial aims to recruit 60 participants over 15 months from North East England. Participants will be within 3 months of stroke which has caused new reduced upper limb function and will still be receiving therapy. Each participant will be randomised to an intervention or control group. Intervention participants will wear a CueS wristband (between 8 am and 8 pm) providing “live” feedback towards pre-set movement goals through a simple visual display and vibration prompts whilst undertaking a 4-week upper limb therapy programme (reviewed twice weekly by an occupational/physiotherapist). Control participants will also complete the 4-week upper limb therapy programme but will wear a ‘sham’ CueS wristband that monitors upper limb activity but provides no feedback. Outcomes will determine study feasibility in terms of recruitment, retention, adverse events, adherence and collection of descriptive clinical and accelerometer motor performance data at baseline, 4 weeks and 8 weeks. DISCUSSION: The WAVES study will address an important gap in the evidence base by reporting the feasibility of undertaking an evaluation of emerging and affordable technology to encourage impaired upper limb activity after stroke. The study will establish whether the study protocol can be supported by clinical stroke services, thereby informing the design of a future multi-centre randomised controlled trial of clinical and cost-effectiveness. TRIAL REGISTRATION: ISRCTN:82306027. Registered 12 July 2016. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13063-016-1628-2) contains supplementary material, which is available to authorized users
Noncovalent Interactions of Hydrated DNA and RNA Mapped by 2D-IR Spectroscopy
Biomolecules couple to their aqueous environment through a variety of
noncovalent interactions. Local structures at the surface of DNA and RNA are
frequently determined by hydrogen bonds with water molecules, complemented by
non-specific electrostatic and many-body interactions. Structural fluctuations
of the water shell result in fluctuating Coulomb forces on polar and/or ionic
groups of the biomolecular structure and in a breaking and reformation of
hydrogen bonds. Two-dimensional infrared (2D-IR) spectroscopy of vibrational
modes of DNA and RNA gives insight into local hydration geometries, elementary
molecular dynamics, and the mechanisms behind them. In this chapter, recent
results from 2D-IR spectroscopy of native and artificial DNA and RNA are
presented, together with theoretical calculations of molecular couplings and
molecular dynamics simulations. Backbone vibrations of DNA and RNA are
established as sensitive noninvasive probes of the complex behavior of hydrated
helices. The results reveal the femtosecond fluctuation dynamics of the water
shell, the short-range character of Coulomb interactions, and the strength and
fluctuation amplitudes of interfacial electric fields.Comment: To appear as Chapter 8 of Springer Series in Optical Sciences:
Coherent Multidimensional Spectroscopy -- Editors: Cho, Minhaeng (Ed.), 201
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