2,219 research outputs found

    Metabolomic profiling predicts outcome of rituximab therapy in rheumatoid arthritis.

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    ObjectiveTo determine whether characterisation of patients' metabolic profiles, utilising nuclear magnetic resonance (NMR) and mass spectrometry (MS), could predict response to rituximab therapy. 23 patients with active, seropositive rheumatoid arthritis (RA) on concomitant methotrexate were treated with rituximab. Patients were grouped into responders and non-responders according to the American College of Rheumatology improvement criteria, at a 20% level at 6 months. A Bruker Avance 700 MHz spectrometer and a Thermo Scientific Q Exactive Hybrid Quadrupole-Orbitrap mass spectrometer were used to acquire (1)H-NMR and ultra high pressure liquid chromatography (UPLC)-MS/MS spectra, respectively, of serum samples before and after rituximab therapy. Data processing and statistical analysis were performed in MATLAB. 14 patients were characterised as responders, and 9 patients were considered non-responders. 7 polar metabolites (phenylalanine, 2-hydroxyvalerate, succinate, choline, glycine, acetoacetate and tyrosine) and 15 lipid species were different between responders and non-responders at baseline. Phosphatidylethanolamines, phosphatidyserines and phosphatidylglycerols were downregulated in responders. An opposite trend was observed in phosphatidylinositols. At 6 months, 5 polar metabolites (succinate, taurine, lactate, pyruvate and aspartate) and 37 lipids were different between groups. The relationship between serum metabolic profiles and clinical response to rituximab suggests that (1)H-NMR and UPLC-MS/MS may be promising tools for predicting response to rituximab

    A variable neurodegenerative phenotype with polymerase gamma mutation

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    mtDNA replication and repair, causes mitochondrial diseases including autosomal dominant progressive external ophthalmoplegia (PEO),1 childhood hepato-encephalopathy (Alpers– Huttenlocher syndrome), adult-onset spinocerebellar ataxia, and sensory nerve degeneration with dysarthria and ophthalmoparesis (SANDO)

    Dental unit water content and antibiotic resistance of Pseudomonas aeruginosa and Pseudomonas species: a case study

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    Background Many studies consider the contamination of dental unit waterlines (DUWLs), but few of them have studied the possible presence of antibiotic resistant Pseudomonas aeruginosa in the DUWLs. Aims Investigation of the presence of P. aeruginosa and Pseudomonas spp. strains in DUWLs and evaluation of their resistance to six antibiotics (ceftazidime, netilmicin, piperacillin/tazobactam, meropenem, levofloxacin, colistin sulfate) at a public dental clinic in Milan, Italy. Results Dental units were contaminated by P. aeruginosa with loads of 2-1,000 CFU/L and were mainly located on the mezzanine floor, with a range of 46-54%, while Pseudomonas spp. were primarily found on the first and second floors, ranging from 50 to 91%. P. aeruginosa was antibiotic resistant in 30% of the strains tested, andPseudomonas spp. in 31.8% . Cold water from controls was also contaminated by these microorganisms. Conclusion Monitoring antibiotic resistance in the water and adopting disinfection procedures on DUs are suggested within the Water Safety Plan

    The Covering-Assignment Problem for Swarm-powered Ad-hoc Clouds: A Distributed 3D Mapping Use-case

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    The popularity of drones is rapidly increasing across the different sectors of the economy. Aerial capabilities and relatively low costs make drones the perfect solution to improve the efficiency of those operations that are typically carried out by humans (e.g., building inspection, photo collection). The potential of drone applications can be pushed even further when they are operated in fleets and in a fully autonomous manner, acting de facto as a drone swarm. Besides automating field operations, a drone swarm can serve as an ad-hoc cloud infrastructure built on top of computing and storage resources available across the swarm members and other connected elements. Even in the absence of Internet connectivity, this cloud can serve the workloads generated by the swarm members themselves, as well as by the field agents operating within the area of interest. By considering the practical example of a swarm-powered 3D reconstruction application, we present a new optimization problem for the efficient generation and execution, on top of swarm-powered ad-hoc cloud infrastructure, of multi-node computing workloads subject to data geolocation and clustering constraints. The objective is the minimization of the overall computing times, including both networking delays caused by the inter-drone data transmission and computation delays. We prove that the problem is NP-hard and present two combinatorial formulations to model it. Computational results on the solution of the formulations show that one of them can be used to solve, within the configured time-limit, more than 50% of the considered real-world instances involving up to two hundred images and six drones

    Heuristics for optimizing 3D mapping missions over swarm-powered ad hoc clouds

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    Drones have been getting more and more popular in many economy sectors. Both scientific and industrial communities aim at making the impact of drones even more disruptive by empowering collaborative autonomous behaviors -- also known as swarming behaviors -- within fleets of multiple drones. In swarming-powered 3D mapping missions, unmanned aerial vehicles typically collect the aerial pictures of the target area whereas the 3D reconstruction process is performed in a centralized manner. However, such approaches do not leverage computational and storage resources from the swarm members.We address the optimization of a swarm-powered distributed 3D mapping mission for a real-life humanitarian emergency response application through the exploitation of a swarm-powered ad hoc cloud. Producing the relevant 3D maps in a timely manner, even when the cloud connectivity is not available, is crucial to increase the chances of success of the operation. In this work, we present a mathematical programming heuristic based on decomposition and a variable neighborhood search heuristic to minimize the completion time of the 3D reconstruction process necessary in such missions. Our computational results reveal that the proposed heuristics either quickly reach optimality or improve the best known solutions for almost all tested realistic instances comprising up to 1000 images and fifteen drones

    Single-Commodity Robust Network Design with Finite and Hose Demand Sets

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    We study a single-commodity Robust Network Design problem (sRND) defined on an undirected graph. Our goal is to determine minimum cost capacities such that any traffic demand from a given uncertainty set can be satisfied by a feasible single-commodity flow. We consider two ways of representing the uncertainty set, either as a finite list of scenarios or as a polytope. We propose a branch-and- cut algorithm to derive optimal solutions to sRND, built on a capacity-based integer linear programming formulation. It is strenghtened with valid inequalities derived as {0,1/2 }-Chvátal-Gomory cuts. Since the formulation contains exponentially many constraints, we provide practical separation algorithms. Extensive computational experiments show that our approach is effective, in comparison to existing approaches from the literature as well as to solving a flow based formulation by a general purpose solver

    Single-Commodity Robust Network Design with Finite and Hose Demand Sets

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    We study a single-commodity Robust Network Design problem (sRND) defined on an undirected graph. Our goal is to determine minimum cost capacities such that any traffic demand from a given uncertainty set can be satisfied by a feasible single-commodity flow. We consider two ways of representing the uncertainty set, either as a finite list of scenarios or as a polytope. We propose a branch-and- cut algorithm to derive optimal solutions to sRND, built on a capacity-based integer linear programming formulation. It is strenghtened with valid inequalities derived as {0,1/2 }-Chvátal-Gomory cuts. Since the formulation contains exponentially many constraints, we provide practical separation algorithms. Extensive computational experiments show that our approach is effective, in comparison to existing approaches from the literature as well as to solving a flow based formulation by a general purpose solver

    Experimental evidence of antiproton reflection by a solid surface

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    We report here experimental evidence of the reflection of a large fraction of a beam of low energy antiprotons by an aluminum wall. This derives from the analysis of a set of annihilations of antiprotons that come to rest in rarefied helium gas after hitting the end wall of the apparatus. A Monte Carlo simulation of the antiproton path in aluminum indicates that the observed reflection occurs primarily via a multiple Rutherford-style scattering on Al nuclei, at least in the energy range 1-10 keV where the phenomenon is most visible in the analyzed data. These results contradict the common belief according to which the interactions between matter and antimatter are dominated by the reciprocally destructive phenomenon of annihilation.Comment: 5 pages with 5 figure
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