541 research outputs found
Probing live cells with optically driven and monitored micro-rotors
Optically trapped particles can be used as probes to study the mechanical properties of substances on a microscopic scale. Such experiments have been performed on colloids, single bio-molecules such as DNA and proteins, and components of living cells. A particularly promising type of probe particle is the micro-rotor - an optically trapped and powered microscopic rotating particle. Such a probe allows steady-state motion, and is ideal for the measurement of viscosity on a microscopic scale. The change in polarisation of the trapping beam due to scattering by the probe particle can be used to measure the optical torque acting on, and the rotation of, the probe particle. We present results from experiments showing that it is possible to rotate small calcite crystals adhering to the membrane of a cell in vitro, and measure the applied torque and rotation speed
Dynamic Phase Transitions in Cell Spreading
We monitored isotropic spreading of mouse embryonic fibroblasts on
fibronectin-coated substrates. Cell adhesion area versus time was measured via
total internal reflection fluorescence microscopy. Spreading proceeds in
well-defined phases. We found a power-law area growth with distinct exponents
a_i in three sequential phases, which we denote basal (a_1=0.4+-0.2), continous
(a_2=1.6+-0.9) and contractile (a_3=0.3+-0.2) spreading. High resolution
differential interference contrast microscopy was used to characterize local
membrane dynamics at the spreading front. Fourier power spectra of membrane
velocity reveal the sudden development of periodic membrane retractions at the
transition from continous to contractile spreading. We propose that the
classification of cell spreading into phases with distinct functional
characteristics and protein activity patterns serves as a paradigm for a
general program of a phase classification of cellular phenotype. Biological
variability is drastically reduced when only the corresponding phases are used
for comparison across species/different cell lines.Comment: 4 pages, 5 figure
Cell adhesion and cortex contractility determine cell patterning in the Drosophila retina
Hayashi and Carthew (Nature 431 [2004], 647) have shown that the packing of
cone cells in the Drosophila retina resembles soap bubble packing, and that
changing E- and N-cadherin expression can change this packing, as well as cell
shape.
The analogy with bubbles suggests that cell packing is driven by surface
minimization. We find that this assumption is insufficient to model the
experimentally observed shapes and packing of the cells based on their cadherin
expression. We then consider a model in which adhesion leads to a surface
increase, balanced by cell cortex contraction. Using the experimentally
observed distributions of E- and N-cadherin, we simulate the packing and cell
shapes in the wildtype eye. Furthermore, by changing only the corresponding
parameters, this model can describe the mutants with different numbers of
cells, or changes in cadherin expression.Comment: revised manuscript; 8 pages, 6 figures; supplementary information not
include
Membrane shape as a reporter for applied forces
Recent advances have enabled 3-dimensional reconstructions of biological structures in vivo, ranging in size and complexity from single proteins to multicellular structures. In particular, tomography and confocal microscopy have been exploited to capture detailed 3-dimensional conformations of membranes in cellular processes ranging from viral budding and organelle maintenance to phagocytosis. Despite the wealth of membrane structures available, there is as yet no generic, quantitative method for their interpretation. We propose that by modeling these observed biomembrane shapes as fluid lipid bilayers in mechanical equilibrium, the externally applied forces as well as the pressure, tension, and spontaneous curvature can be computed directly from the shape alone. To illustrate the potential power of this technique, we apply an axial force with optical tweezers to vesicles and explicitly demonstrate that the applied force is equal to the force computed from the membrane conformation
Phase ordering and shape deformation of two-phase membranes
Within a coupled-field Ginzburg-Landau model we study analytically phase
separation and accompanying shape deformation on a two-phase elastic membrane
in simple geometries such as cylinders, spheres and tori. Using an exact
periodic domain wall solution we solve for the shape and phase ordering field,
and estimate the degree of deformation of the membrane. The results are
pertinent to a preferential phase separation in regions of differing curvature
on a variety of vesicles.Comment: 4 pages, submitted to PR
Interactions between proteins bound to biomembranes
We study a physical model for the interaction between general inclusions
bound to fluid membranes that possess finite tension, as well as the usual
bending rigidity. We are motivated by an interest in proteins bound to cell
membranes that apply forces to these membranes, due to either entropic or
direct chemical interactions. We find an exact analytic solution for the
repulsive interaction between two similar circularly symmetric inclusions. This
repulsion extends over length scales of order tens of nanometers, and contrasts
with the membrane-mediated contact attraction for similar inclusions on
tensionless membranes. For non circularly symmetric inclusions we study the
small, algebraically long-ranged, attractive contribution to the force that
arises. We discuss the relevance of our results to biological phenomena, such
as the budding of caveolae from cell membranes and the striations that are
observed on their coats.Comment: 22 pages, 2 figure
Enhanced reaction kinetics in biological cells
The cell cytoskeleton is a striking example of "active" medium driven
out-of-equilibrium by ATP hydrolysis. Such activity has been shown recently to
have a spectacular impact on the mechanical and rheological properties of the
cellular medium, as well as on its transport properties : a generic tracer
particle freely diffuses as in a standard equilibrium medium, but also
intermittently binds with random interaction times to motor proteins, which
perform active ballistic excursions along cytoskeletal filaments. Here, we
propose for the first time an analytical model of transport limited reactions
in active media, and show quantitatively how active transport can enhance
reactivity for large enough tracers like vesicles. We derive analytically the
average interaction time with motor proteins which optimizes the reaction rate,
and reveal remarkable universal features of the optimal configuration. We
discuss why active transport may be beneficial in various biological examples:
cell cytoskeleton, membranes and lamellipodia, and tubular structures like
axons.Comment: 10 pages, 2 figure
Recent Results from the BRAHMS Experiment
We present recent results obtained by the BRAHMS experiment at the
Relativistic Heavy Ion Collider (RHIC) for the systems of Au + Au and Cu + Cu
at \rootsnn{200} and at 62.4 GeV, and p + p at \rootsnn{200}. Nuclear
modification factors for Au + Au and Cu + Cu collisions are presented. Analysis
of anti-particle to particle ratios as a function of rapidity and collision
energy reveal that particle populations at the chemical freeze-out stage for
heavy-ion reactions at and above SPS energies are controlled by the baryon
chemical potential. From the particle spectra we deduce significant radial
expansion ( 0.75), as expected for systems created with a large
initial energy density. We also measure the elliptic flow parameter
versus rapidity and \ptn. We present rapidity dependent ratios within
for Au + Au and Cu + Cu at \rootsnn{200}. \Raa is found to increase
with decreasing collision energy, decreasing system size, and when going
towards more peripheral collisions. However, \Raa shows only a very weak
dependence on rapidity (for ), both for pions and protons.Comment: 16 pages and 14 figures, proceedings for plenary talk at Quark Matter
2005, Budapest, Hungar
Negotiation in strategy making teams : group support systems and the process of cognitive change
This paper reports on the use of a Group Support System (GSS) to explore at a micro level some of the processes manifested when a group is negotiating strategy-processes of social and psychological negotiation. It is based on data from a series of interventions with senior management teams of three operating companies comprising a multi-national organization, and with a joint meeting subsequently involving all of the previous participants. The meetings were concerned with negotiating a new strategy for the global organization. The research involved the analysis of detailed time series data logs that exist as a result of using a GSS that is a reflection of cognitive theory
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