Cytological and molecular characterization of three gametoclones of Citrus clementina

Abstract Background Three gametoclonal plants of Citrus clementina Hort. ex Tan., cv. Nules, designated ESP, FRA, and ITA (derived from three labs in Spain, France, and Italy, respectively), were selected for cytological and molecular characterization in order to elucidate genomic rearrangements provoked by haploidization. The study included comparisons of their ploidy, homozygosity, genome integrity, and gene dosage, using chromosome counting, flow cytometry, SSR marker genotyping, and array-Comparative Genomic Hybridization (arrayCGH). Results Chromosome counting and flow cytometry revealed that ESP and FRA were haploid, but ITA was tri-haploid. Homozygous patterns, represented by a single peak (allele), were observed among the three plants at almost all SSR loci distributed across the entire diploid donor genome. Those few loci with extra peaks visualized as output from automated sequencing runs, generally low or ambiguous, might result from amplicons of paralogous members at the locus, non-specific sites, or unexpected recombinant alleles. No new alleles were found, suggesting the genomes remained stable and intact during gametogenesis and regeneration. The integrity of the haploid genome also was supported by array-CGH studies, in which genomic profiles were comparable to the diploid control. Conclusions The presence of few gene hybridization abnormalities, corroborated by gene dosage measurements, were hypothetically due to the segregation of hemizygous alleles and minor genomic rearrangements occurring during the haploidization procedure. In conclusion, these plants that are valuable genetic and breeding materials contain completely homozygous and essentially intact genomes

Dieta de Phytotoma rutila (Passeriformes: Cotingidae) en el desierto del Monte central, Argentina

Se determinó la composición botánica de la dieta del Cortarramas Phytotoma rutila en el desierto del Monte central, Argentina, mediante análisis microhistológico de las heces. En ambos sexos, la dieta estuvo compuesta por una importante proporción de frutos (26.8%) y hojas (35.6%) del arbusto Lycium tenuispinosum (Solanaceae) y hojas del árbol Prosopis flexuosa (Fabaceae)(26.8%). P. rutila es una ave predominantemente folívora con un alto consumo de frutos durante el verano, cuando estos ítems son abundantes, lo que refleja su comportamiento oportunista.Botanical composition of the diet of White-tipped Plantcutter Phytotoma rutila in the central Monte desert from Argentina, was determined by microhistological analysis of excreta. In both sexes, the diet was composed by a high proportion of fruits (26.8%) and leaves (35.6%) from the shrub Lycium tenuispinosum (Solanaceae) and leaves from the tree Prosopis flexuosa (Fabaceae) (26.8%). P. rutila is a predominantly folivorous bird with a high consumption of fruit during summer, when these items are abundant, which shows an opportunistic behavior.Fil: Rios, Juan Manuel. Universidad de Chile; Chile. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales. Provincia de Mendoza. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales. Universidad Nacional de Cuyo. Instituto Argentino de Nivología, Glaciología y Ciencias Ambientales; ArgentinaFil: Zarco, Agustín. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Universidad Nacional de Cuyo. Instituto Argentino de Investigaciones de las Zonas Áridas; ArgentinaFil: Mosca Torres, Maria Eugenia. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Provincia de Mendoza. Instituto Argentino de Investigaciones de las Zonas Áridas. Universidad Nacional de Cuyo. Instituto Argentino de Investigaciones de las Zonas Áridas; ArgentinaFil: Sabat, Pablo. Universidad de Chile; Chil

Comparison of ecological diversity and species composition of macroalgae, benthic macroinvertebrates, and fish assemblages between two tropical rocky reefs

Within the marine environment, the rocky shores are recognized for their high species diversity and particularly transitional zones represent areas of biotic mix, promoted by historical and ecological natural variations that allow the presence of taxa from different regions and which present dissimilar biological traits. An extensive survey describes the benthic macroalgae, macroinvertebrates (molluscs, crustaceans, and echinoderms), and fish assemblages at two rocky reefs, Islas Marietas and near Tehuamixtle, in a tropical-temperate transitional zone in the Pacific waters of central Mexico using traditional ecological indices (richness, diversity, and evenness) and complementary taxonomic distinctness indices. Biological material inside each of ten randomly-chosen quadrants (25 × 25 cm) placed along two 50 m transects oriented parallel to the coastline, between 6 and 2 m depth was collected. From field collections, 204 species were identified: macroalgae (22), molluscs (55), crustaceans (78), echinoderms (11), and fish (38). The structure of macroalgae, macroinvertebrates and fishes was similar between sites. Species of macroalgae, molluscs, and fishes were more diverse in summer; crustaceans and echinoderms were more diverse in winter. Our results and the literature suggest a latitudinal pattern of lower seasonal changes in echinoderms and crustaceans at high latitudes, as compared to southern regions of the Mexican tropical Pacific.En el medio marino, las costas rocosas son reconocidas por su alta diversidad de especies y particularmente las zonas de transición representan áreas de mezcla biótica, provocado por las variaciones naturales históricas y ecológicas que permiten la presencia de taxones de diferentes regiones y que presentan rasgos biológicos diferentes. Un estudio intensivo permitió describir los ensambles de macroalgas, macroinvertebrados (moluscos, crustáceos y equinodermos) y de peces en dos arrecifes rocosos: Islas Marietas y Tehuamixtle, en la zona de transición tropical-templado en el norte del Pacífico de México, utilizando índices ecológicos tradicionales (riqueza, diversidad y uniformidad) y complementando con índices de distinción taxonómica. Se colectó el material biológico de 10 cuadrantes (25 × 25 cm) ubicados aleatoriamente a lo largo de dos transectos de 50 m paralelos a la línea de costa, a una profundidad de entre 6 y 12 m. Se identificaron 204 especies: 22 macroalgas, 55 moluscos, 78 crustáceos, 11 equinodermos y 38 peces. La estructura de la comunidad de macroalgas, macroinvertebrados y peces fue similar entre los sitios. Macroalgas, moluscos y peces fueron más diversos en verano y crustáceos y equinodermos fueron más diversos en el invierno. Los resultados y la literatura sugieren un patrón latitudinal de menores cambios estacionales en equinodermos y crustáceos en las altas respecto a bajas latitudes en el Pacífico mexicano

Multipotent MAO and cholinesterase inhibitors for the treatment of Alzheimer's disease: synthesis, pharmacological analysis and molecular modeling of heterocyclic substituted alkyl and cycloalkyl propargyl amine.

The synthesis, pharmacological evaluation and molecular modeling of heterocyclic substituted alkyl and cycloalkyl propargyl amines 1-7 of type I, and 9-12 of type II, designed as multipotent inhibitors able to simultaneously inhibit monoamine oxidases (MAO-A/B) as well as cholinesterase (AChE/BuChE) enzymes, as potential drugs for the treatment of Alzheimer's disease, are described. Indole derivatives 1-7 of type I are well known MAO inhibitors whose capacity to inhibit AChE and BuChE was here investigated for the first time. As a result, compound 7 was identified as a MAO-B inhibitor (IC50 = 31 +/- 2 nM) and a moderately selective eqBuChE inhibitor (IC50 = 4.7 +/- 0.2 mu M). Conversely, the new and readily available 5-amino-7-(prop-2-yn-1-yl)-6,7,8,9-tetrahydropyrido[2,3-b][1,6]naphthyridine derivatives 9-13 of type II are poor MAO inhibitors, but showed AChE selective inhibition, compound 12 being the most attractive as it acts as a non-competitive inhibitor on EeAChE (IC50 = 25 +/- 3 nM, K-i = 65 nM). The ability of this compound to interact with the AChE peripheral binding site was confirmed by kinetic studies and by molecular modeling investigation. Studies on human ChEs confirmed that 12 is a selective AChE inhibitor with inhibitory potency in the submicromolar range. Moreover, in agreement with its mode of action, 12 was shown to be able to inhibit A beta aggregation induced by hAChE by 30.6%

Association study of nonsynonymous single nucleotide polymorphisms in schizophrenia.

BACKGROUND: Genome-wide association studies using several hundred thousand anonymous markers present limited statistical power. Alternatively, association studies restricted to common nonsynonymous single nucleotide polymorphisms (nsSNPs) have the advantage of strongly reducing the multiple testing problem, while increasing the probability of testing functional single nucleotide polymorphisms (SNPs). METHODS: We performed a case-control association study of common nsSNPs in Galician (northwest Spain) samples using the Affymetrix GeneChip Human 20k cSNP Kit, followed by a replication study of the more promising results. After quality control procedures, the discovery sample consisted of 5100 nsSNPs at minor allele frequency >5% analyzed in 476 schizophrenia patients and 447 control subjects. The replication sample consisted of 4069 cases and 15,128 control subjects of European origin. We also performed multilocus analysis, using aggregated scores of nsSNPs at liberal significance thresholds and cross-validation procedures. RESULTS: The 5 independent nsSNPs with false discovery rate q 64 .25, as well as 13 additional nsSNPs at p < .01 and located in functional candidate genes, were genotyped in the replication samples. One SNP, rs13107325, located at the metal ions transporter gene SLC39A8, reached significance in the combined sample after Bonferroni correction (trend test, p = 2.7 7 10(-6), allelic odds ratio = 1.32). This SNP presents minor allele frequency of 5% to 10% in many European populations but is rare outside Europe. We also confirmed the polygenic component of susceptibility. CONCLUSIONS: Taking into account that another metal ions transporter gene, SLC39A3, is associated to bipolar disorder, our findings reveal a role for brain metal homeostasis in psychosis