The effect of different spectro-temporal representations of an input auditory stimulus on the fitting of a point process model of auditory neurons

We compare the effect of the use of three different spectro-temporal representations of an input auditory stimulus on the fitting of a point process model of auditory neuron firing. The three spectro-temporal representations considered are the spectrogram, a gammatone filterbank and the Hilbert spectrum. We firstly investigate how the model fits the recorded neuronal data when using either one of the three representations and secondly how well do the estimated parameters of the model correspond to their experimentally measured counterparts. It is observed that all three representations yield a model that fits well the recorded data. However, the characteristic frequencies obtained with the spectro-temporal parameters of the model using the gammatone filterbank corresponds better to the experimentally measured characteristic frequency than the characteristic frequency obtained with the models using the other two spectro-temporal representations. Therefore, it is concluded that the quality of the fitted parameters can be affected by the choice of the spectro-temporal representation and that, as could have been expected, the gammatone filterbank seems to more accurately extract the relevant spectro-temporal characteristics of the input auditory stimulus.Fonds quebecois de la recherche sur la nature et les technologiesNational Institutes of Health (U.S.) (Grant DP1-OD003646

BAYESIAN SPECTRAL AMPLITUDE ESTIMATION FOR SPEECH ENHANCEMENT WITH CORRELATED SPECTRAL COMPONENTS

ABSTRACT In Bayesian short-time spectral amplitude (STSA) estimation for single channel speech enhancement, the spectral components are traditionally assumed to be uncorrelated. However, this assumption is not exact since some correlation is present in practice. In this paper, we propose a STSA estimator with correlated frequency components. Since its closed-form solution is not readily available, we alternatively derive closedform expressions for corresponding upper and lower bounds. Three new speech enhancement estimators are proposed based on those bounds: one for each bound and one that is a combination of both. Results of PESQ and informal listening experiments indicate that the proposed estimators give better performances than earlier estimators

A flexible bio-inspired hierarchical model for analyzing musical timbre

A flexible and multipurpose bio-inspired hierarchical model for analyzing musical timbre is presented in this paper. Inspired by findings in the fields of neuroscience, computational neuroscience, and psychoacoustics, not only does the model extract spectral and temporal characteristics of a signal, but it also analyzes amplitude modulations on different timescales. It uses a cochlear filter bank to resolve the spectral components of a sound, lateral inhibition to enhance spectral resolution, and a modulation filter bank to extract the global temporal envelope and roughness of the sound from amplitude modulations. The model was evaluated in three applications. First, it was used to simulate subjective data from two roughness experiments. Second, it was used for musical instrument classification using the k-NN algorithm and a Bayesian network. Third, it was applied to find the features that characterize sounds whose timbres were labeled in an audiovisual experiment. The successful application of the proposed model in these diverse tasks revealed its potential in capturing timbral information

Interactions between BRCA2 and RAD51 for promoting homologous recombination in Leishmania infantum.

In most organisms, the primary function of homologous recombination (HR) is to allow genome protection by the faithful repair of DNA double-strand breaks. The vital step of HR is the search for sequence homology, mediated by the RAD51 recombinase, which is stimulated further by proteins mediators such as the tumor suppressor BRCA2. The biochemical interplay between RAD51 and BRCA2 is unknown in Leishmania or Trypanosoma. Here we show that the Leishmania infantum BRCA2 protein possesses several critical features important for the regulation of DNA recombination at the genetic and biochemical level. A BRCA2 null mutant, generated by gene disruption, displayed genomic instability and gene-targeting defects. Furthermore, cytological studies show that LiRAD51 can no longer localize to the nucleus in this mutant. The Leishmania RAD51 and BRCA2 interact together and the purified proteins bind single-strand DNA. Remarkably, LiBRCA2 is a recombination mediator that stimulates the invasion of a resected DNA double-strand break in an undamaged template by LiRAD51 to form a D-loop structure. Collectively, our data show that LiBRCA2 and LiRAD51 promote HR at the genetic and biochemical level in L. infantum, the causative agent of visceral leishmaniasis

Screening for Familial APP Mutations in Sporadic Cerebral Amyloid Angiopathy

Background Advances in genetic technology have revealed that variation in the same gene can cause both rare familial and common sporadic forms of the same disease. Cerebral amyloid angiopathy (CAA), a common cause of symptomatic intracerebral hemorrhage (ICH) in the elderly, can also occur in families in an autosomal dominant pattern. The majority of affected families harbor mutations in the Beta amyloid Peptide (Aβ) coding region of the gene for amyloid precursor protein (APP) or have duplications of chromosomal segments containing APP. Methodology/Principal Findings A total of 58 subjects with a diagnosis of probable or definite CAA according to validated criteria were included in the present study. We sequenced the Aβ coding region of APP in 58 individuals and performed multiplex ligation-dependent probe amplification to determine APP gene dosage in 60. No patient harbored a known or novel APP mutation or gene duplication. The frequency of mutations investigated in the present study is estimated to range from 0% to 8% in individuals with probable CAA in the general population, based on the ascertained sample size. Conclusions/Significance We found no evidence that variants at loci associated with familial CAA play a role in sporadic CAA. Based on our findings, these rare highly-penetrant mutations are unlikely to be seen in sporadic CAA patients. Therefore, our results do not support systematic genetic screening of CAA patients who lack a strong family history of hemorrhage or dementia.National Institute of Neurological Disorders and Stroke (U.S.) (grant K23NS042695)American Heart AssociationAmerican Stroke Association (Bugher Foundation for Stroke Prevention Research

Trends in the incidence of dementia: design and methods in the Alzheimer Cohorts Consortium.

Several studies have reported a decline in incidence of dementia which may have large implications for the projected burden of disease, and provide important guidance to preventive efforts. However, reports are conflicting or inconclusive with regard to the impact of gender and education with underlying causes of a presumed declining trend remaining largely unidentified. The Alzheimer Cohorts Consortium aggregates data from nine international population-based cohorts to determine changes in the incidence of dementia since 1990. We will employ Poisson regression models to calculate incidence rates in each cohort and Cox proportional hazard regression to compare 5-year cumulative hazards across study-specific epochs. Finally, we will meta-analyse changes per decade across cohorts, and repeat all analysis stratified by sex, education and APOE genotype. In all cohorts combined, there are data on almost 69,000 people at risk of dementia with the range of follow-up years between 2 and 27. The average age at baseline is similar across cohorts ranging between 72 and 77. Uniting a wide range of disease-specific and methodological expertise in research teams, the first analyses within the Alzheimer Cohorts Consortium are underway to tackle outstanding challenges in the assessment of time-trends in dementia occurrence

Mesure in vivo de l'impédance du myocarde durant l'ischémie et détermination de ses résistivités électriques intracellulaires et extracellulaires

Le myocarde -- Mesures d'impédance et technique à quatre électrodes -- Système de mesure et particularités reliées aux mesures in vivo -- Système de mesure in vitro -- Particularités reliées aux mesures in vivo et ajouts apportées au système de mesure in vitro -- Découplage cellulaire durant l'Ischémie aigue : mesures d'impédance appuyées par l'utilisation d'un modèle biodmaine incluant les jonctions GAP -- Synthèse des résultats -- Mesures d'impédance -- Paramètres bidomaines -- Interprétation des résultats -- Observation du découplage cellulaire -- Lien entre le couplage cellulaire et la fibrillation