Characterizing historical transformation trajectories of the forest landscape in Rome's metropolitan area (Italy) for effective planning of sustainability goals

With the aim at developing a landscape dynamics framework for environmental planning and management and testing the effectiveness of protected areas in achieving the 2030 Agenda of the United Nations sustainability goals, we characterized the historical transformation trajectories of forest area changes from 1936 to 2010 in the Metropolitan City of Rome Capital (Italy). Remote sensing-based products coupled with landscape pattern metrics and fragmentation analysis have been implemented, comparing different historical forest maps. The results show a remarkable forest area gain – from 17.6% to 25.5% – thanks to 68,299 ha of recently established forest. Statistical descriptors showed that the highest relative gain occurred in mountain zones, confirming a wide European forest recovery pattern in marginal areas from past deforestation and overexploitation. Deforestation mainly occurred in the flat and hilly areas where almost 26,000 ha of forests were lost since 1936. In summary, two main forest landscape dynamics were reconstructed: (I) the increase of forest cover fragmentation in the lowland areas; and (II) the rise in the forest area in the interior sectors of the mountain landscape, mainly within protected areas. Restoring the forest ecosystem's bioecological integrity has been highlighted as an urgent action for biodiversity conservation and carbon mitigation. In lowland areas, the study revealed the urgent need to establish new protected areas and rewilding spaces as landscape metrics are relatively below the sustainability targets for healthy forest ecosystems. The proposed framework can be used for testing the effectiveness of environmental planning and management in other forest landscapes to achieve the Agenda 2030 goals

Mapping of stones and their deterioration forms : the Clock Tower, Venice (Italy)

The HYPERION EU project aims to develop a Decision Support System to improve resilience and sustainable reconstruction of historic areas faced with climate change and extreme events. In this context, Venice presents an outstanding example of urban and architectural complexity and richness. The mapping of the ornamental stones of the facade of the Venice Clock Tower (Torre dell'Orologio) and their deterioration patterns acts as a milestone on which to build the knowledge-acquisition process of the system as regards stone artefacts and their decay products. The Clock Tower is an early Renaissance building (1499) in Lombardesque style and stands over the entrance to the Mercerie on the northern side of St. Mark's Square. Detailed surveys and mapping of both building materials (mainly stones) and deterioration patterns were carried out, the latter following the glossary of weathering forms, coupled with an easy-to-use scale of evaluation of their intensity. The data output consists of several monothematic maps which can be handled separately, each one focusing on precise lithological or specific deterioration aspects. This study also proposes a simple approach to summarizing the total state of deterioration of the building in the form of a Total Deterioration Rank (TDR) and its representation. The stones used in the facade are regional (Ammonitico Rosso and Scaglia Rossa) and extra-regional limestones (Istrian Stone), as well as Mediterranean white and coloured marbles and stones already used in antiquity (i.e., Fior di Pesco or marmor chalcidicum, lapis porphyrites, a volcanic rock from the Egyptian Eastern Desert, Proconnesian marble from the Island of Marmara, Pavonazzetto toscano and white Carrara marble from the Italian Apuan Alps). The most frequent forms of deterioration detected are black crusts, patinas, discoloration and patterns linked to erosion processes. The interrelation of different mappings led to a number of useful considerations concerning differences in the effectiveness of maintenance procedures between public and private management of the monument

SUS-BAR: a database of pig proteins with statistically validated structural and functional annotation

Given the relevance of the pig proteome in different studies, including human complex maladies, a statistical validation of the annotation is required for a better understanding of the role of specific genes and proteins in the complex networks underlying biological processes in the animal. Presently, approximately 80% of the pig proteome is still poorly annotated, and the existence of protein sequences is routinely inferred automatically by sequence alignment towards preexisting sequences. In this article, we introduce SUS-BAR, a database that derives information mainly from UniProt Knowledgebase and that includes 26 206 pig protein sequences. In SUS-BAR, 16 675 of the pig protein sequences are endowed with statistically validated functional and structural annotation. Our statistical validation is determined by adopting a cluster-centric annotation procedure that allows transfer of different types of annotation, including structure and function. Each sequence in the database can be associated with a set of statistically validated Gene Ontologies (GOs) of the three main sub-ontologies (Molecular Function, Biological Process and Cellular Component), with Pfam functional domains, and when possible, with a cluster Hidden Markov Model that allows modelling the 3D structure of the protein. A database search allows some statistics demonstrating the enrichment in both GO and Pfam annotations of the pig proteins as compared with UniProt Knowledgebase annotation. Searching in SUS-BAR allows retrieval of the pig protein annotation for further analysis. The search is also possible on the basis of specific GO terms and this allows retrieval of all the pig sequences participating into a given biological process, after annotation with our system. Alternatively, the search is possible on the basis of structural information, allowing retrieval of all the pig sequences with the same structural characteristics

MTHFR C677T polymorphism analysis: A simple, effective restriction enzyme-based method improving previous protocols

Background: 5,10-Methylentetrahydrofolate reductase (MTHFR) C677T polymorphism is one of the most studied genetic variations in the human genome. Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) is one of the most used techniques to characterize the point mutations in genomic sequences because of its suitability and low cost. The most widely used method for the MTHFR C677T polymorphism characterization was developed by Frosst et al. (1995) but appears to have some technical limitations. The aim of this study was to propose a novel PCR-RFLP method for the detection of this polymorphism. Methods: In order to retrieve all published articles possibly describing any PCR-RFLP methods useful to analyze MTHFR C677T polymorphism, we performed systematic queries on PubMed, using a combination of Boolean operators (AND/OR) and MeSH terms. Amplify software was used in order to design a new primer pair following the optimal standard criteria. Primer-BLAST software was used to check primer pair's biological specificity. Results: The analysis of previous literature showed that PCR-RFLP method remains the most used technique. None of the 108 primer pairs described was ideal with regard to main accepted primer pair biochemical technical parameters. The new primer pair amplifies a DNA-fragment of 513 base pair (bp) that, in the presence of the polymorphism, is cut by Hinf I enzyme in two pieces of 146 bp and 367 bp and clearly visible on 2% agarose gel. The level of expertise and the materials required are minimal and the protocol takes one day to carry out. Conclusion: Our original PCR-RFLP strategy, specifically designed to make the analysis optimal with respect to PCR primers and gel analysis, fits the ideal criteria compared to the widely used strategy by Frosst et al (1995) as well as any other PCR-RFLP strategies proposed for MTHFR C677T polymorphism genotyping to date

Identifying the 993-994 CE Miyake event in the oldest dated living tree in Europe

Combined dendrochronology and accelerator mass spectrometry radiocarbon (AMS 14C) dating analyses were used in order to date an old living tree named Italus, growing in the Pollino massif in Southern Italy. Wiggle match AMS 14C dating analysis was performed on a 320-yr-long floating chronology obtained by cross-dating four wood cores extracted from the exposed roots of the tree. Following this approach, an age for the tree of ≈1230 yr was estimated. This age makes Italus the oldest living tree in Europe. High-resolution 14C dating analyses performed on single rings extracted from the tree stem allowed us to identify the 993.994 CE large excursion in atmospheric 14C concentration (Miyake event) revealing for the first time its presence in the Mediterranean basin

Aerodynamic optimization of the exhaust system of an aft-mounted boundary layer ingestion propulsor

Purpose Novel aircraft propulsion configurations require a greater integration of the propulsive system with the airframe. As a consequence of the closer integration of the propulsive system, higher levels of flow distortion at the fan face are expected. This distortion will propagate through the fan and penalize the system performance. This will also modify the exhaust design requirements. This paper aims to propose a methodology for the aerodynamic optimization of the exhaust for novel embedded propulsive systems. To model the distortion transfer, a low order throughflow fan model is included. Design/methodology/approach As the case study a 2D axisymmetric aft-mounted annular boundary layer ingestion (BLI) propulsor is used. An automated computational fluid dynamics approach is applied with a parametric definition of the design space. A throughflow body force model for the fan is implemented and validated for 2D axisymmetric and 3D flows. A multi-objective optimization based on evolutionary algorithms is used for the exhaust design. Findings By the application of the optimization methodology, a maximum benefit of approximately 0.32% of the total aircraft required thrust was observed by the application of compact exhaust designs. Furthermore, for the embedded system, it is observed that the design of the compact exhaust and the nacelle afterbody have a considerable impact on the aerodynamic performance. Originality/value This paper presents a novel approach for the exhaust design of embedded propulsive systems in novel aircraft configurations. To the best of the authors’ knowledge, this is the first detailed optimization of the exhaust system on an annular aft-mounted BLI propulsor

The southernmost beech (Fagus sylvatica) forests of Europe (Mount Etna, Italy): ecology, structural stand-type diversity and management implications

The southernmost European beech forests are located in the upper forest vegetation belt on Mount Etna volcano. Their standstructural patterns were analysed to assess the effects of the site-ecological factors and previous management practices on the forest structure. Five main structural-silvicultural types were identified among the main beech forest types: coppice, highmountain coppice (HMCo), high forest, coppice in conversion to high-forest and non-formal stand. A detailed standstructural analysis was carried out through measured dendrometric parameters and derived structural characters linked to both the horizontal and the vertical profiles. Plant regeneration processes were also assessed, and several biodiversity indicators were calculated. The collected data indicate a high variability of beech stand structures in relation to the heterogeneity of the site-ecological characteristics as well as to the effects of both natural and anthropic disturbance factors. The occurrence of particular stand structures along the altitude gradient on Mount Etna is evident. It is especially visible in the multi-stemmed HMCos in relation to the changing, and increasingly limiting, ecological factors, although at higher altitudes historical anthropic actions (felling) also have had an influence. Inside the Mediterranean area, these stands highlight their ecological marginality, in terms of both latitude and altitude, especially regarding current climate change processes

Mediterranean old-growth forests exhibit resistance to climate warming

Old-growth mountain forests represent an ideal setting for studying long-term impacts of climate change. We studied the few remnants of old-growth forests located within the Pollino massif (southern Italy) to evaluate how the growth of conspecific young and old trees responded to climate change. We investigated two conifer species (Abies alba and Pinus leucodermis) and two hardwood species (Fagus sylvatica and Quercus cerris). We sampled one stand per species along an altitudinal gradient, ranging from a drought-limited low-elevation hardwood forest to a cold-limited subalpine pine forest. We used a dendrochronological approach to characterize the long-term growth dynamics of old (age > 120 years) versus young (age < 120 years) trees. Younger trees grew faster than their older conspecifics during their juvenile stage, regardless of species. Linear mixed effect models were used to quantify recent growth trends (1950–2015) and responses to climate for old and young trees. Climate sensitivity, expressed as radial growth responses to climate during the last three decades, partially differed between species because high spring temperatures enhanced conifer growth, whereas F. sylvatica growth was negatively affected by warmer spring conditions. Furthermore, tree growth was negatively impacted by summer drought in all species. Climate sensitivity differed between young and old trees, with younger trees tending to be more sensitive in P. leucodermis and A. alba, whereas older F. sylvatica trees were more sensitive. In low-elevation Q. cerris stands, limitation of growth due to drought was not related to tree age, suggesting symmetric water competition. We found evidence for a fast-growth trend in young individuals compared with that in their older conspecifics. Notably, old trees tended to have relatively stable growth rates, showing remarkable resistance to climate warming. These responses to climate change should be recognized when forecasting the future dynamics of old-growth forests for their sustainable management. © 2021 The Author