Biochronological data for the Early Pleistocene site of Quibas (SE Spain) inferred from rodents assemblage

In this paper, the rodent fauna from the Early Pleistocene of Gruta1 (Quibas karstic complex, Murcia, SE Spain) is described. The assemblage includes one arvicoline (Allophaiomys sp.), two murines (Apodemus ex gr. mystacinus-epimelas, Castillomys rivas) and one glirid (Eliomys quercinus). The rodent assemblage indicates an age very close to the age of Fuente Nueva 3 and Barranco León 5 in the Guadix-Baza Basin, and Sima del Elefante in the Atapuerca karstic complex, between ca. 1.2-1.4My.

Non-AIDS-related comorbidities in people living with HIV-1 aged 50 years and older: The AGING POSITIVE study.

OBJECTIVE: To characterize the profile of non-AIDS-related comorbidities (NARC) in the older HIV-1-infected population and to explore the factors associated with multiple NARC. METHODS: This was a multicentre, cross-sectional study including HIV-1-infected patients aged ≥50 years, who were virologically suppressed and had been on a stable antiretroviral therapy (ART) regimen for at least 6 months. A multiple regression model explored the association between demographic and clinical variables and the number of NARC. RESULTS: Overall, 401 patients were enrolled. The mean age of the patients was 59.3 years and 72.6% were male. The mean duration of HIV-1 infection was 12.0 years and the median exposure to ART was 10.0 years. The mean number of NARC was 2.1, and 34.7% of patients had three or more NARC. Hypercholesterolemia was the most frequent NARC (60.8%), followed by arterial hypertension (39.7%) and chronic depression/anxiety (23.9%). Arterial hypertension and diabetes mellitus were the most frequently treated NARC (95.6% and 92.6% of cases, respectively). The linear regression analysis showed a positive relationship between age and NARC (B=0.032, 95% confidence interval 0.015-0.049; p=0.0003) and between the duration of HIV-1 infection and NARC (B=0.039, 95% confidence interval 0.017-0.059; p=0.0005). CONCLUSIONS: A high prevalence of NARC was found, the most common being metabolic, cardiovascular, and psychological conditions. NARC rates were similar to those reported for the general population, suggesting a larger societal problem beyond HIV infection. A multidisciplinary approach is essential to reduce the burden of complex multi-morbid conditions in the HIV-1-infected population.info:eu-repo/semantics/publishedVersio

Comparison of Rain-Fast Bait Stations Versus Foliar Bait Sprays for Control of Oriental Fruit Fly, Bactrocera dorsalis, in Papaya Orchards in Hawaii

Bait stations represent an environmentally friendly attract-and-kill approach to fruit fly population suppression. Recently a novel, visually attractive, rain-fast bait station was developed in Hawaii for potential use against multiple species of pestiferous fruit flies. Here, we compared the efficacy of GF-120 NF Naturalyte Fruit Fly Bait applied either as foliar sprays or onto bait stations in reducing female oriental fruit fly, Bactrocera dorsalis (Hendel) (Diptera: Tephritidae), population density and level of fruit infestation in commercial papaya orchards in Hawaii. Trapping and infestation data were used as indicators of the effectiveness of the two bait application methods. For the first 10 weeks of the study, captures of female B. dorsalis in monitoring traps were significantly greater in control plots than in plots treated with foliar sprays or bait stations. Six weeks after the first bait spray, incidence of infestation (i.e. number of fruit with one or more B. dorsalis larvae) of quarter to half-ripe papaya fruit was reduced by 71.4% and 63.1% for plots with bait stations and foliar sprays, respectively, as compared to control plots. Twelve weeks after first spray, incidence of infestation was reduced by only 54.5% and 45.4% for plots with bait stations and foliar sprays, respectively, as compared to control plots. About 42% less GF-120 was used in orchard plots with bait stations compared to those subject to foliar sprays. The impact of field sanitation on the outcome is also discussed. The results indicate that bait stations can provide a simple, efficient, and economical method of applying insecticidal baits to control fruit flies and a safer alternative to foliar sprays

Heterogeneous network embedding enabling accurate disease association predictions.

BackgroundIt is significant to identificate complex biological mechanisms of various diseases in biomedical research. Recently, the growing generation of tremendous amount of data in genomics, epigenomics, metagenomics, proteomics, metabolomics, nutriomics, etc., has resulted in the rise of systematic biological means of exploring complex diseases. However, the disparity between the production of the multiple data and our capability of analyzing data has been broaden gradually. Furthermore, we observe that networks can represent many of the above-mentioned data, and founded on the vector representations learned by network embedding methods, entities which are in close proximity but at present do not actually possess direct links are very likely to be related, therefore they are promising candidate subjects for biological investigation.ResultsWe incorporate six public biological databases to construct a heterogeneous biological network containing three categories of entities (i.e., genes, diseases, miRNAs) and multiple types of edges (i.e., the known relationships). To tackle the inherent heterogeneity, we develop a heterogeneous network embedding model for mapping the network into a low dimensional vector space in which the relationships between entities are preserved well. And in order to assess the effectiveness of our method, we conduct gene-disease as well as miRNA-disease associations predictions, results of which show the superiority of our novel method over several state-of-the-arts. Furthermore, many associations predicted by our method are verified in the latest real-world dataset.ConclusionsWe propose a novel heterogeneous network embedding method which can adequately take advantage of the abundant contextual information and structures of heterogeneous network. Moreover, we illustrate the performance of the proposed method on directing studies in biology, which can assist in identifying new hypotheses in biological investigation

The effects of creatine supplementation combined with resistance training on regional measures of muscle hypertrophy: a systematic review with meta-analysis.

The purpose of this paper was to carry out a systematic review with meta-analysis of randomized controlled trials that examined the combined effects of resistance training (RT) and creatine supplementation on regional changes in muscle mass with direct imaging measures of hypertrophy. Moreover, we performed regression analyses to determine the potential influence of covariates. We included trials of at least 6 weeks in duration that examined the combined effects of creatine supplementation and RT on site-specific direct measures of hypertrophy (magnetic resonance imaging [MRI], computed tomography [CT] or ultrasound) in healthy adults. A total of 44 outcomes were analyzed across 10 studies that met inclusion criteria. Univariate analysis of all standardized outcomes showed a pooled mean estimate of 0.11 (95% Credible Interval [CrI]: -0.02 to 0.25) providing evidence of a very small effect favoring creatine supplementation when combined with RT, compared to RT and placebo. Multivariate analyses found similar small benefits for the combination of creatine supplementation and RT on changes in upper and lower body muscle thickness (0.10-0.16 cm). Analyses of moderating effects indicated a small superior benefit for creatine supplementation on younger compared to older adults (0.17 [95% CrI: -0.09 to 0.45]). In conclusion, results suggest that creatine supplementation combined with RT promotes a small increase in direct measures of skeletal muscle hypertrophy in both the upper and lower body

Engineering the Controlled Assembly of Filamentous Injectisomes in E. coli K-12 for Protein Translocation into Mammalian Cells.

Bacterial pathogens containing type III protein secretion systems (T3SS) assemble large needle-like protein complexes in the bacterial envelope, called injectisomes, for translocation of protein effectors into host cells. The application of these molecular syringes for the injection of proteins into mammalian cells is hindered by their structural and genomic complexity, requiring multiple polypeptides encoded along with effectors in various transcriptional units (TUs) with intricate regulation. In this work, we have rationally designed the controlled expression of the filamentous injectisomes found in enteropathogenic Escherichia coli (EPEC) in the nonpathogenic strain E. coli K-12. All structural components of EPEC injectisomes, encoded in a genomic island called the locus of enterocyte effacement (LEE), were engineered in five TUs (eLEEs) excluding effectors, promoters and transcriptional regulators. These eLEEs were placed under the control of the IPTG-inducible promoter Ptac and integrated into specific chromosomal sites of E. coli K-12 using a marker-less strategy. The resulting strain, named synthetic injector E. coli (SIEC), assembles filamentous injectisomes similar to those in EPEC. SIEC injectisomes form pores in the host plasma membrane and are able to translocate T3-substrate proteins (e.g., translocated intimin receptor, Tir) into the cytoplasm of HeLa cells reproducing the phenotypes of intimate attachment and polymerization of actin-pedestals elicited by EPEC bacteria. Hence, SIEC strain allows the controlled expression of functional filamentous injectisomes for efficient translocation of proteins with T3S-signals into mammalian cells

Insights on the climatic evolution at the pre-Jaramillo to Jaramillo transition in Europe using mineralogical analysis of the Quibas palaeontological site (Early Pleistocene, southern Iberian Peninsula)

© The Authors, 2023. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (for details please see http://creativecommons.org/licenses/by/4.0/), which permits use, copy, adaptation, distribution, and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source. This document is the Published version of a Published Work that appeared in final form in Spanish Journal of Palaeontology. To access the final edited and published work see https://doi.org/10.7203/sjp.27562The palaeontological site of Quibas is a karst outcrop with an age between 1.1 and 0.9 Ma (late Early Pleistocene). It represents the unique continuous sequence of terrestrial vertebrates of pre-Jaramillo to Jaramillo age in Europe. It is formed by two main structures: Quibas-Sima (divided into units QS-1 to QS-7) and Quibas-Cueva (QC-1– QC-6). In this work, we analyse the mineralogical composition of the sediments that form the stratigraphic units of Quibas-Sima using X-ray diffraction analysis, electrical conductivity, ion chromatography and optical emission spectrometry, to evaluate climatic trends in the sequence. Preliminary results indicate that there is an increase in the proportions of carbonates, gypsum and halite from QS-2 towards QS-4 and QS-5 (1.07–0.99 Ma), suggesting a progressive decrease in precipitation in south-eastern Iberian Peninsula a million years ago. Our data are consistent with the onset of a glacial phase, which is supported by the progressive disappearance of taxa related to forests and water bodies in Quibas-Sima, such as the flying squirrel Hylopetes sp. and the semiaquatic shrew Neomys sp., in favour of the appearance of taxa linked to open areas such as the Montpellier snake (Malpolon monspessulanus) and the snub-nosed viper (Vipera latastei). El yacimiento paleontológico de Quibas es un afloramiento kárstico con una edad comprendida entre 1,1 y 0,9 Ma (Pleistoceno Inferior tardío). Representa la única secuencia continua de vertebrados terrestres de edad pre-Jaramillo a Jaramillo de Europa. Está formado por dos estructuras principales: Quibas-Sima (dividida en las unidades QS-1 a QS-7) y Quibas-Cueva (QC-1 a QC-6). En este trabajo se estudia la composición mineralógica de los sedimentos que conforman las unidades estratigráficas de QuibasSima, a través e análisis de difracción de rayos X, conductividad eléctrica, cromatografía iónica y espectrometría de emisión óptica por plasma de argón, con el objetivo de evaluar tendencias paleoclimáticas en la secuencia. Los resultados preliminares indican que hay un aumento en las proporciones de carbonatos, yesos y halita desde QS-2 hacia QS-4 y QS-5 (1,07–0,99 Ma), lo que sugiere una progresiva disminución de las precipitaciones en el sureste peninsular hace un millón de años. Los datos son consistentes con el inicio de una fase glaciar, lo cual viene apoyado por la desaparición progresiva en Quibas-Sima de taxones afines a bosques y cursos de agua estables como la ardilla voladora Hylopetes sp. y el musgaño Neomys sp., en favor de la aparición de taxones ligados a espacios abiertos como la culebra bastarda (Malpolon monspessulanus) y la víbora hocicuda (Vipera latastei)

Non-AIDS-related comorbidities in people living with HIV-1 aged 50 years and older: The AGING POSITIVE study

Objective: To characterize the profile of non-AIDS-related comorbidities (NARC) in the older HIV-1-infected population and to explore the factors associated with multiple NARC. Methods: This was a multicentre, cross-sectional study including HIV-1-infected patients aged ≥50 years, who were virologically suppressed and had been on a stable antiretroviral therapy (ART) regimen for at least 6 months. A multiple regression model explored the association between demographic and clinical variables and the number of NARC. Results: Overall, 401 patients were enrolled. The mean age of the patients was 59.3 years and 72.6% were male. The mean duration of HIV-1 infection was 12.0 years and the median exposure to ART was 10.0 years. The mean number of NARC was 2.1, and 34.7% of patients had three or more NARC. Hypercholesterolemia was the most frequent NARC (60.8%), followed by arterial hypertension (39.7%) and chronic depression/anxiety (23.9%). Arterial hypertension and diabetes mellitus were the most frequently treated NARC (95.6% and 92.6% of cases, respectively). The linear regression analysis showed a positive relationship between age and NARC (B=0.032, 95% confidence interval 0.015-0.049; p=0.0003) and between the duration of HIV-1 infection and NARC (B=0.039, 95% confidence interval 0.017-0.059; p=0.0005). Conclusions: A high prevalence of NARC was found, the most common being metabolic, cardiovascular, and psychological conditions. NARC rates were similar to those reported for the general population, suggesting a larger societal problem beyond HIV infection. A multidisciplinary approach is essential to reduce the burden of complex multi-morbid conditions in the HIV-1-infected population.Merck Sharp & Dohme, Lda, Portugal provided financial support for the non-interventional study (Protocol Nr. MK0518-826 ).info:eu-repo/semantics/publishedVersio

Outcomes of nonagenarians after transcatheter aortic valve implantation

Introduction and objectives: Nonagenarians are a fast-growing age group among cardiovascular patients, especially with aortic stenosis, but data about their prognosis after transcatheter aortic valve implantation (TAVI) is scarce. The objective of our study is to analyze the baseline characteristics of nonagenarians treated with TAVI and determine whether age = 90 years is associated with a worse prognosis compared to non-nonagenarian patients. Methods: We included all patients =75 years enrolled in the multicenter prospective Spanish TAVI registry between 2009 and 2018. Patients < 75 years were excluded. Results: A total of 8073 elderly patients (= 75 years) from 46 Spanish centers were enrolled in the Spanish TAVI registry; 7686 were between = 75 and < 90 years old (95.2%), and 387 were nonagenarian patients (4.79%). A gradual increase of nonagenarians was observed. The transfemoral access was used in 91.6% of the cases, predominantly among the nonagenarian patients (91.4% vs 95.1%, P = .01). Nonagenarians were more likely to die during their hospital stay (4.3% vs 7.0% among nonagenarians, P = .01). However, no difference was seen in the all-cause mortality rates reported at the 1-year follow-up (8.8% vs 11.3%, P =.07). In the multivariate analysis, age = 90 years was not independently associated with a higher adjusted all-cause mortality rate (HR, 1.37, 95%CI, 0.91–1.97, P = .14). The baseline creatinine levels, and the in-hospital bleeding complications were all associated with a worse long-term prognosis in nonagenarians treated with TAVI. Conclusions: Nonagenarians are a very high-risk and growing population with severe AS in whom TAVI may be a safe and effective strategy. Careful patient selection by the TAVI heart team is mandatory to achieve maximum efficiency in this population where the baseline kidney function and bleeding complications may determine the long-term prognosis after TAVI. © 2021 Sociedad Española de Cardiología. Published by Permanyer Publications

Formulation and Evaluation of Corn Pancakes Containing Bovine Plasma Protein and Tender Corn

Abstract: The purpose of this research was to fortify and evaluate some nutritional properties of a new product (corn pancakes), prepared with tender corn and bovine plasmatic protein. In doing so, two products were formulated. Both products were analyzed to determine their yield as well as their content of protein, fat, fiber, moisture, ash and essential amino acids. In addition to that, microbiological quality, degree of likeness, protein efficiency ratio and digestibility were also analyzed. All the results showed that the product containing bovine plasma had a higher yield, moisture and protein content (p&lt;0.05). In almost all cases, the product containing bovine plasma met or exceeded the established ideal requirements of essential amino acids. The Protein Efficiency Ratio (PER), shows that the animals fed with the experimental diet, showed a weight gain of 2.64 g per each g of protein intake. Corn pancakes had acceptable sensory score 88.4% for taste and 95.3% for color. In conclusion, due to its acceptability and highly nutritious value, the product containing bovine plasma could be used as an alternative to help solve the nutritional problems the population is facing these days