The Boson peak in supercooled water

We perform extensive molecular dynamics simulations of the TIP4P/2005 model of water to investigate the origin of the Boson peak reported in experiments on supercooled water in nanoconfined pores and in hydration water around proteins. We find that the onset of the Boson peak in supercooled bulk water coincides with the crossover to a predominantly low-density-like liquid below the Widom line TW. The frequency and onset temperature of the Boson peak in our simulations of bulk water agree well with the results from experiments on nanoconfined water. Our results suggest that the Boson peak in water is not an exclusive effect of confinement. We further find that, similar to other glass-forming liquids, the vibrational modes corresponding to the Boson peak are spatially extended and are related to transverse phonons found in the parent crystal, here ice Ih.We thank S. V. Buldyrev and S. Sastry for helpful discussions. The simulations were in part performed using resources provided by the Swedish National Infrastructure for Computing (SNIC) at the NSC and HPC2N centers. LGMP, KTW and DS were supported by the Swedish Research Council. KTW is also supported by the Icelandic Research Fund through the START programme. PK acknowledges the support of National Academies Keck Future Initiatives award. HES thanks NSF Grants No. CHE0911389, No. CHE0908218, and No. CHE-1213217. (Swedish Research Council; Icelandic Research Fund through the START programme; National Academies Keck Future Initiatives award; CHE0911389 - NSF; CHE0908218 - NSF; CHE-1213217 - NSF)Published versio

The Boson peak in supercooled water

We perform extensive molecular dynamics simulations of the TIP4P/2005 model of water to investigate the origin of the Boson peak reported in experiments on supercooled water in nanoconfined pores, and in hydration water around proteins. We find that the onset of the Boson peak in supercooled bulk water coincides with the crossover to a predominantly low-density-like liquid below the Widom line $T_W$. The frequency and onset temperature of the Boson peak in our simulations of bulk water agree well with the results from experiments on nanoconfined water. Our results suggest that the Boson peak in water is not an exclusive effect of confinement. We further find that, similar to other glass-forming liquids, the vibrational modes corresponding to the Boson peak are spatially extended and are related to transverse phonons found in the parent crystal, here ice Ih.Comment: 25 pages, 9 figure

On the bond distance in methane

The equilibrium bond distance in methane was optimized using coupled-pair functional and contracted CI wave functions, and a Gaussian basis that includes g-type functions on carbon and d-type functions on hydrogen. The resulting bond distance, when corrected for core-valence correlation effects, agrees with the experimental value of 2.052 a(0) to within the experimental uncertainty of 0.002 a(0). The main source of error in the best previous studies, which showed discrepancies with experiment of 0.007 a(0) is shown to be basis set incompleteness. In particular, it is important that the basis set be close to saturation, at least for the lower angular quantum numbers

Selectivity of the First Two Glycerol Dehydrogenation Steps Determined Using Scaling Relationships

Glycerol is a byproduct of biodiesel production and an abundant feedstock that can be used for the synthesis of high-value chemicals. There are many approaches for glycerol valorization, but, due to the complicated reaction mechanism, controlling which products are produced is challenging. Here, we describe glycerol\u27s chemical selectivity for different metallic catalysts using descriptors for carbon (mainly *C, *CH2OH) and oxygen (mainly *O, CH3O*). The quality of these descriptors and the weighted combinations thereof are validated based on their fit, via linear regression, to the binding energies of all reaction intermediates generated in the first two glycerol dehydrogenation steps on a number of close-packed Ru, Co, Rh, Ir, Ni, Pd, Pt, Cu, Ag, and Au surfaces. We show that *CH2OH is a better descriptor than *C for the studied carbon-bound intermediates, which is attributed to the observation that the adjacent *OH group interacts with the surface. This leads to a negative oxygen dependence, which can be generalized to similar alcohol-derived adsorbates. Furthermore, we show that CH3O* is a better oxygen descriptor than *0 for the studied intermediates. This is mainly attributed to the difference between the single and double bonds, as we show that *OH is closer to the accuracy of CH3O*. Multilinear regression with different combinations of *C, *O, and *OH is comparable in accuracy to that of *CH2OH and CH3O*. Scaling relationships are used to determine the selectivity map for glycerol dehydrogenation. The results show that the first dehydrogenation is selective toward two different intermediates (one bonded via the secondary carbon and the other via the secondary oxygen) depending on the relative bond strength of the carbon and oxygen descriptors. The second dehydrogenation step results in five intermediates, again depending primarily on the relative bond strength of carbon and oxygen to the surface. The selectivity maps can be used together with kinetic considerations and experimental data to find catalyst candidates for glycerol dehydrogenation

Ab initio van der Waals interactions in simulations of water alter structure from mainly tetrahedral to high-density-like

The structure of liquid water at ambient conditions is studied in ab initio molecular dynamics simulations using van der Waals (vdW) density-functional theory, i.e. using the new exchange-correlation functionals optPBE-vdW and vdW-DF2. Inclusion of the more isotropic vdW interactions counteracts highly directional hydrogen-bonds, which are enhanced by standard functionals. This brings about a softening of the microscopic structure of water, as seen from the broadening of angular distribution functions and, in particular, from the much lower and broader first peak in the oxygen-oxygen pair-correlation function (PCF), indicating loss of structure in the outer solvation shells. In combination with softer non-local correlation terms, as in the new parameterization of vdW-DF, inclusion of vdW interactions is shown to shift the balance of resulting structures from open tetrahedral to more close-packed. The resulting O-O PCF shows some resemblance with experiment for high-density water (A. K. Soper and M. A. Ricci, Phys. Rev. Lett., 84:2881, 2000), but not directly with experiment for ambient water. However, an O-O PCF consisting of a linear combination of 70% from vdW-DF2 and 30% from experiment on low-density liquid water reproduces near-quantitatively the experimental O-O PCF for ambient water, indicating consistency with a two-liquid model with fluctuations between high- and low-density regions