881 research outputs found
Insight into the Architecture of the NuRD Complex: Structure of the RbAp48-MTA1 Subcomplex
The nucleosome remodeling and deacetylase (NuRD) complex is a widely conserved transcriptional co-regulator that harbors both nucleosome remodeling and histone deacetylase activities. It plays a critical role in the early stages of ES cell differentiation and the reprogramming of somatic to induced pluripotent stem cells. Abnormalities in several NuRD proteins are associated with cancer and aging. We have investigated the architecture of NuRD by determining the structure of a subcomplex comprising RbAp48 and MTA1. Surprisingly, RbAp48 recognizes MTA1 using the same site that it uses to bind histone H4, showing that assembly into NuRD modulates RbAp46/48 interactions with histones. Taken together with other results, our data show that the MTA proteins act as scaffolds for NuRD complex assembly. We further show that the RbAp48-MTA1 interaction is essential for the in vivo integration of RbAp46/48 into the NuRD complex
A Biomass-Based Integral Approach Enables Li-S Full Pouch Cells with Exceptional Power Density and Energy Density
Lithium-sulfur (Li-S) batteries, as part of the post-lithium-ion batteries (post-LIBs), are expected to deliver significantly higher energy densities. Their power densities, however, are today considerably worse than that of the LIBs, limiting the Li-S batteries to very few specific applications that need low power and long working time. With the rapid development of single cell components (cathode, anode, or electrolyte) in the last few years, it is expected that an integrated approach can maximize the power density without compromising the energy density in a Li-S full cell. Here, this goal is achieved by using a novel biomass porous carbon matrix (PCM) in the anode, as well as N-Co9S8 nanoparticles and carbon nanotubes (CNTs) in the cathode. The authors' approach unlocks the potential of the electrodes and enables the Li-S full pouch cells with unprecedented power densities and energy densities (325 Wh kg−1 and 1412 W kg−1, respectively). This work addresses the problem of low power densities in the current Li-S technology, thus making the Li-S batteries a strong candidate in more application scenarios
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Computational design of transmembrane pores.
Transmembrane channels and pores have key roles in fundamental biological processes1 and in biotechnological applications such as DNA nanopore sequencing2-4, resulting in considerable interest in the design of pore-containing proteins. Synthetic amphiphilic peptides have been found to form ion channels5,6, and there have been recent advances in de novo membrane protein design7,8 and in redesigning naturally occurring channel-containing proteins9,10. However, the de novo design of stable, well-defined transmembrane protein pores that are capable of conducting ions selectively or are large enough to enable the passage of small-molecule fluorophores remains an outstanding challenge11,12. Here we report the computational design of protein pores formed by two concentric rings of α-helices that are stable and monodisperse in both their water-soluble and their transmembrane forms. Crystal structures of the water-soluble forms of a 12-helical pore and a 16-helical pore closely match the computational design models. Patch-clamp electrophysiology experiments show that, when expressed in insect cells, the transmembrane form of the 12-helix pore enables the passage of ions across the membrane with high selectivity for potassium over sodium; ion passage is blocked by specific chemical modification at the pore entrance. When incorporated into liposomes using in vitro protein synthesis, the transmembrane form of the 16-helix pore-but not the 12-helix pore-enables the passage of biotinylated Alexa Fluor 488. A cryo-electron microscopy structure of the 16-helix transmembrane pore closely matches the design model. The ability to produce structurally and functionally well-defined transmembrane pores opens the door to the creation of designer channels and pores for a wide variety of applications
Measurements of and Production in + Collisions at = 200 GeV
We report measurements of charmed-hadron (, ) production cross
sections at mid-rapidity in + collisions at a center-of-mass energy of
200 GeV by the STAR experiment. Charmed hadrons were reconstructed via the
hadronic decays , and their charge conjugates,
covering the range of 0.62.0 GeV/ and 2.06.0 GeV/ for
and , respectively. From this analysis, the charm-pair production cross
section at mid-rapidity is = 170 45
(stat.) (sys.) b. The extracted charm-pair cross section is
compared to perturbative QCD calculations. The transverse momentum differential
cross section is found to be consistent with the upper bound of a Fixed-Order
Next-to-Leading Logarithm calculation.Comment: 15 pages, 16 figures. Revised version submitted to Phys. Rev.
System size and energy dependence of near-side di-hadron correlations
Two-particle azimuthal () and pseudorapidity ()
correlations using a trigger particle with large transverse momentum () in
+Au, Cu+Cu and Au+Au collisions at =\xspace 62.4 GeV and
200~GeV from the STAR experiment at RHIC are presented. The \ns correlation is
separated into a jet-like component, narrow in both and
, and the ridge, narrow in but broad in .
Both components are studied as a function of collision centrality, and the
jet-like correlation is studied as a function of the trigger and associated
. The behavior of the jet-like component is remarkably consistent for
different collision systems, suggesting it is produced by fragmentation. The
width of the jet-like correlation is found to increase with the system size.
The ridge, previously observed in Au+Au collisions at = 200
GeV, is also found in Cu+Cu collisions and in collisions at
=\xspace 62.4 GeV, but is found to be substantially smaller at
=\xspace 62.4 GeV than at = 200 GeV for the
same average number of participants ().
Measurements of the ridge are compared to models.Comment: 17 pages, 14 figures, submitted to Phys. Rev.
Cross Section and Transverse Single-Spin Asymmetry of Mesons in Collisions at GeV at Forward Rapidity
We present a measurement of the cross section and transverse single-spin
asymmetry () for mesons at large pseudorapidity from
~GeV collisions. The measured cross section for
~GeV/ and is well described by a
next-to-leading-order perturbative-quantum-chromodynamics calculation. The
asymmetries have been measured as a function of Feynman- () from
, as well as transverse momentum () from
~GeV/. The asymmetry averaged over positive is
. The results are consistent with prior
transverse single-spin measurements of forward and mesons at
various energies in overlapping ranges. Comparison of different particle
species can help to determine the origin of the large observed asymmetries in
collisions.Comment: 484 authors, 13 pages, 11 figures, 4 tables, 2008 data. v2 is version
accepted by Phys. Rev. D. Plain text data tables for the points plotted in
figures for this and previous PHENIX publications are (or will be)publicly
available at http://www.phenix.bnl.gov/papers.htm
Inclusive charged hadron elliptic flow in Au + Au collisions at = 7.7 - 39 GeV
A systematic study is presented for centrality, transverse momentum ()
and pseudorapidity () dependence of the inclusive charged hadron elliptic
flow () at midrapidity() in Au+Au collisions at
= 7.7, 11.5, 19.6, 27 and 39 GeV. The results obtained with
different methods, including correlations with the event plane reconstructed in
a region separated by a large pseudorapidity gap and 4-particle cumulants
(), are presented in order to investigate non-flow correlations and
fluctuations. We observe that the difference between and
is smaller at the lower collision energies. Values of , scaled by
the initial coordinate space eccentricity, , as a function
of are larger in more central collisions, suggesting stronger collective
flow develops in more central collisions, similar to the results at higher
collision energies. These results are compared to measurements at higher
energies at the Relativistic Heavy Ion Collider ( = 62.4 and 200
GeV) and at the Large Hadron Collider (Pb + Pb collisions at =
2.76 TeV). The values for fixed rise with increasing collision
energy within the range studied (). A comparison to
viscous hydrodynamic simulations is made to potentially help understand the
energy dependence of . We also compare the results to UrQMD
and AMPT transport model calculations, and physics implications on the
dominance of partonic versus hadronic phases in the system created at Beam
Energy Scan (BES) energies are discussed.Comment: 20 pages, 12 figures. Version accepted by PR
Studies of di-jet survival and surface emission bias in Au+Au collisions via angular correlations with respect to back-to-back leading hadrons
We report first results from an analysis based on a new multi-hadron
correlation technique, exploring jet-medium interactions and di-jet surface
emission bias at RHIC. Pairs of back-to-back high transverse momentum hadrons
are used for triggers to study associated hadron distributions. In contrast
with two- and three-particle correlations with a single trigger with similar
kinematic selections, the associated hadron distribution of both trigger sides
reveals no modification in either relative pseudo-rapidity or relative
azimuthal angle from d+Au to central Au+Au collisions. We determine associated
hadron yields and spectra as well as production rates for such correlated
back-to-back triggers to gain additional insights on medium properties.Comment: By the STAR Collaboration. 6 pages, 2 figure
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