Evaluation of an uncalibrated agricultural land model at the sub-field scale

An uncalibrated agricultural land surface model, Agro-IBIS, was validated at the sub-field scale using data collected at a local agricultural field site planted with maize in 2009, with a focus on capturing the spatial variability and accumulation rates of soil moisture and leaf area index. Capturing the variability was deemed important for evaluating the model\u27s potential for inclusion as the land surface model in atmospheric models. An ensemble method of forcing the model with different combinations of input data was used in an attempt to produce the variability seen in measurements across the field. The model was able to produce a range of soil moisture similar to the range observed at the field site, though rates of soil water accumulation and drainage were much higher than observed. The spread in leaf area index measurements was not captured by the model, though the rate of leaf area accumulation was similar in both the field and the model. The model emerged the crop too early due to the lack of calibration, which led to a positive bias in leaf area. The bias in leaf area led to biases in a number of other variables, including sensible heat flux and in-canopy temperature. Despite the biases, which were expected due to the lack of calibration, the ability of Agro-IBIS to capture spatial variability in soil moisture at the sub-field scale make it a good candidate for coupling to other models

Changes in extreme, cold-season synoptic precipitation events under global warming

We analyze regional climate model (RCM) simulations of daily, spatially distributed extreme precipitation events, using co-operative network observations and output from 10-year RCM simulations of present and future-scenario climates. We examine an Upper Mississippi River Basin region during October–March for daily amounts that exceed the 99.95th percentile and that occur simultaneously at several observation sites or model grid points. For the observations and each simulation, nearly all such extreme regional events occur when a slow moving, cut-off-low system develops over the Rockies and Great Plains and steadily pumps moisture into the Upper Mississippi region from the Gulf of Mexico. The threshold for the extreme events increases in the future scenario by an amount similar to the increase in saturation specific humidity. The results suggest robust circulation behavior for such extremes in the face of climate change

20th to 21st Century Relative Sea and Land Level Changes in Northern California: Tectonic Land Level Changes and their Contribution to Sea-Level Rise, Humboldt Bay Region, Northern California

Sea-level changes are modulated in coastal northern California by land-level changes due to the earthquake cycle along the Cascadia subduction zone, the San Andreas plate boundary fault system, and crustal faults. Sea-level rise (SLR) subjects ecological and anthropogenic infrastructure to increased vulnerability to changes in habitat and increased risk for physical damage. The degree to which each of these forcing factors drives this modulation is poorly resolved. We use NOAA tide gage data and ‘campaign’ tide gage deployments, Global Navigation Satellite System (GNSS) data, and National Geodetic Survey (NGS) first-order levelling data to calculate vertical land motion (VLM) rates in coastal northern California. Sea-level observations, highway level surveys, and GNSS data all confirm that land is subsiding in Humboldt Bay, in contrast to Crescent City where the land is rising. Subtracting absolute sea-level rate (~1.99 mm/year) from Crescent City (CC) and North Spit (NS) gage relative sea-level rates reveals that CC is uplifting at ~2.83 mm/year and NS is subsiding at ~3.21mm/year. GNSS vertical deformation reveals similar rates of ~2.60 mm/year of uplift at Crescent City. In coastal northern California, there is an E-W trending variation in vertical land motion that is primarily due to Cascadia megathrust fault seismogenic coupling. This interseismic subsidence also dominates the N-S variation in vertical land motion in most of the study region. There exists a second-order heterogeneous N-S trend in vertical land motion that we associate to crustal fault-related strain. There may be non-tectonic contributions to the observed VLM rates

Effects of Concurrent Resistance and Aerobic Training on Load-Bearing Performance and the Army Physical Fitness Test

The purpose of this research was to determine the effects of high intensity endurance training (ET) and resistance training (RT) alone and in combination on various military tasks. Thirty-five male soldiers were randomly assigned to one of four training groups: total body resistance training plus endurance training (RT + ET), upper body resistance training plus endurance training [UB + ET), RT only, and ET only. Training was performed 4 days per week for 12 weeks. Testing occurred before and after the 12-week training regimen. All groups significantly improved push-up performance, whereas only the RT + ET group did not improve sit-up performance. The groups that included ET significantly decreased 2-mile run time, however, only RT + ET and UB + ET showed improved loaded 2-mile run time. Leg power increased for groups that included lower body strengthening exercises (RT and RT + ET). Army Physical Fitness Test performance, loaded running, and leg power responded positively to training, however, it appears there is a high degree of specificity when concurrent training regimens are implemented

Influence of rare species on electrofishing distance when estimating species richness of stream and river reaches

Abstract.-The electrofishing distance needed to estimate fish species richness at the stream or river reach scale is an important question in fisheries science. This distance is governed by the shape of the species accumulation curve, which, in turn, is influenced by a combination of factors, including the number of species, their overall abundances, habitat associations, the efficiency of the sampling method, and the occurrence of rare species. In this study we document the influence of rare species on the species accumulation curves from stream and river sites in data sets from five dispersed regions of the USA. Spatial discontinuity (i.e., a noncontinuous distribution within reaches) was observed in four of the five data sets, and the four data sets contained numerically rare species represented by one or two individuals (termed singletons and doubletons, respectively). Numerically rare species were typically proportionately rare (i.e., ,1% of the total number of individuals captured), but proportionately rare species were not always numerically rare and were dependent on the total number of fish captured. Species richness asymptotes were reached at shorter electrofishing distances when singletons and doubletons were removed. The number of singletons and doubletons in the samples remained relatively constant with increasing sampling effort (i.e., sampling distance and total abundance). Simulation modeling indicated that individual aggregation within species was not a plausible reason for spatially discontinuous species distributions. When accurately detecting the presence of species is a sampling goal, the presence and prevalence of numerically rare species may need to be considered in determining sampling protocols

Local Benchmarks for the Evolution of Major-Merger Galaxies -- Spitzer Observations of a K-Band Selected Sample

We present Spitzer observations for a sample of close major-merger galaxy pairs (KPAIR sample) selected from 2MASS/SDSS-DR3 cross-matches. The goals are to study the star formation activity in these galaxies and to set a local bench mark for the cosmic evolution of close major mergers. The Spitzer KPAIR sample (27 pairs, 54 galaxies) includes all spectroscopically confirmed S+S and S+E pairs in a parent sample that is complete for primaries brighter than K=12.5 mag, projected separations of 5< s < 20 kpc/h, and mass ratios<2.5. The Spitzer data consist of images in 7 bands (3.6, 4.5, 5.8, 8, 24, 70, 160 um). Compared to single spiral galaxies in a control sample, only spiral galaxies in S+S pairs show significantly enhanced specific star formation rate (sSFR=SFR/M), whereas spiral galaxies in S+E pairs do not. Furthermore, the SFR enhancement of spiral galaxies in S+S pairs is highly mass-dependent. Only those with \rm M \gsim 10^{10.5} M_\sun show significant enhancement. Relatively low mass (\rm M \sim 10^{10} M_\sun) spirals in S+S pairs have about the same SFR/M compared to their counterparts in the control sample. There is evidence for a correlation between the global star formation activities (but not the nuclear activities) of the component galaxies in massive S+S major-merger pairs (the "Holmberg effect"). There is no significant difference in the SFR/M between the primaries and the secondaries, nor between spirals of SEP<1 and those of SEP.1. The contribution of KPAIR galaxies to the cosmic SFR density in the local universe is only 1.7%.Comment: 73 pages; accpected by Ap

Familial alcohol supply, adolescent drinking and early alcohol onset in 45 low and middle income countries

This study estimated the extent of familial alcohol supply in 45 low and middle income countries (LMIC), and examined the country-level effects of familial alcohol supply on adolescents' alcohol use. We used data from 45 LMICs that participated in the Global School-Based Student Health Survey (GSHS) between 2003 and 2013 (n = 139,840). The weighted prevalence of familial alcohol supply in each country was estimated. Multilevel binary and ordinal logistic regression analyses were used to examine the country-level effect of familial alcohol supply on early onset of alcohol use (first alcohol before 12), past 30-day alcohol use, lifetime drunkenness and alcohol-related social problems. There were large variations between LMICs in the prevalence of familial alcohol supply and pattern of adolescent alcohol use. The prevalence of familial supply ranged from 0.1% in Tajikistan to 23.8% in St Lucia. It was estimated that a one percentage change in prevalence of familial alcohol supply was associated with 10%, 12% and 12% change in the odds of lifetime drunkenness (OR = 1.10, 95% CI = [1.04, 1.16]), early onset of alcohol use (OR = 1.12, 95% CI = [1.07, 1.08]) and more frequent drinking in the past month (OR = 1.12, 95% CI = [1.04, 1.20]). There were large variations in the prevalence of familial alcohol supply and adolescent alcohol use among LMICs. Adolescents in countries with higher prevalence of familial alcohol supply were more likely to start using alcohol at an earlier age, to have used alcohol in the past 30 days and experience intoxication

Measuring the effectiveness of in-hospital and on-base Prevent Alcohol and Risk-related Trauma in Youth (P.A.R.T.Y.) programs on reducing alcohol related harms in naval trainees: P.A.R.T.Y. Defence study protocol

Abstract Background Reducing alcohol related harms in Australian Defence Force (ADF) trainees has been identified as a priority, but there are few evidence-based prevention programs available for the military setting. The study aims to test whether the P.A.R.T.Y. program delivered in-hospital or on-base, can reduce harmful alcohol consumption among ADF trainees. Methods/design The study is a 3-arm randomized controlled trial, involving 953 Royal Australian Navy trainees from a single base. Trainees, aged 18 to 30 years, will be randomly assigned to the study arms: i. in-hospital P.A.R.T.Y.; ii. On-base P.A.R.T.Y.; and iii. Control group. All groups will receive the routine ADF annual alcohol awareness training. The primary outcome is the proportion of participants reporting an Alcohol Use Disorders Identification Test (AUDIT) score of 8 or above at 12 months’ post-intervention. The secondary outcome is the number of alcohol related incidents reported to the Royal Australian Navy (RAN) in the 12 months’ post-intervention. Discussion This is the first trial of the use of the P.A.R.T.Y. program in the military. If the proposed intervention proves efficacious, it may be a useful program in the early education of RAN trainees. Trial registration Australian New Zealand Clinical Trials Registry (ANZCTR): ACTRN12614001332617 , date of registration: 18/12/2014 ‘retrospectively registered’

The impact of infertility diagnosis on embryo-endometrial dialogue

Initial stages of implantation involve bi-directional molecular crosstalk between the blastocyst and endometrium. This study investigated an association between infertility etiologies, specifically advanced maternal age (AMA) and endometriosis, on the embryo-endometrial molecular dialogue prior to implantation. Co-culture experiments were performed with endometrial epithelial cells (EEC) and cryopreserved day 5 blastocysts (n?=?41???Grade 3BB) donated from patients presenting with AMA or endometriosis, compared to fertile donor oocyte controls. Extracellular vesicles isolated from co-culture supernatant were analyzed for miRNA expression and revealed significant alterations correlating to AMA or endometriosis. Specifically, AMA resulted in 16 miRNAs with increased expression (P???0.05) and strong evidence for negative regulation toward 206 target genes. VEGFA, a known activator of cell adhesion, displayed decreased expression (P???0.05), validating negative regulation by 4 of these increased miRNAs: miR-126; 150; 29a; 29b (P???0.05). In endometriosis patients, a total of 10 significantly altered miRNAs displayed increased expression compared to controls (miR-7b; 9; 24; 34b; 106a; 191; 200b; 200c; 342-3p; 484) (P???0.05), targeting 1014 strong evidence-based genes. Three target genes of miR-106a (CDKN1A, E2F1 and RUNX1) were independently validated. Functional annotation analysis of miRNA-target genes revealed enriched pathways for both infertility etiologies, including disrupted cell cycle regulation and proliferation (P???0.05). These extracellular vesicle-bound secreted miRNAs are key transcriptional regulators in embryo-endometrial dialogue and may be prospective biomarkers of implantation success. One of the limitations of this study is that it was a stimulated, in vitro model and therefore may not accurately reflect the in-vivo environment

Extracellular palladium-catalysed dealkylation of 5-fluoro-1-propargyl-uracil as a bioorthogonally activated prodrug approach

A bioorthogonal organometallic reaction is a biocompatible transformation undergone by a synthetic material exclusively through the mediation of a non-biotic metal source; a selective process used to label biomolecules and activate probes in biological environs. Here we report the in vitro bioorthogonal generation of 5-fluorouracil from a biologically inert precursor by heterogeneous Pd0 catalysis. Although independently harmless, combined treatment of 5-fluoro-1-propargyl-uracil and Pd0-functionalized resins exhibits comparable antiproliferative properties to the unmodified drug in colorectal and pancreatic cancer cells. Live-cell imaging and immunoassay studies demonstrate that the cytotoxic activity of the prodrug/Pd0-resin combination is due to the in situ generation of 5-fluorouracil. Pd0-resins can be carefully implanted in the yolk sac of zebrafish embryos and display excellent biocompatibility and local catalytic activity. The in vitro efficacy shown by this masking/activation strategy underlines its potential to develop a bioorthogonally activated prodrug approach and supports further in vivo investigations