First report of Neopestalotiopsis clavispora causing crown rot in strawberry in Italy

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Metabolic patterns of bacterial communities in aerobic compost teas associated with potential biocontrol of soilborne plant diseases

Aerated compost teas (ACTs) are organic products obtained by forced aeration of composts suspended in liquid phase. These products may be biological control tools alternative to synthetic fungicides, because ACTs contain antagonistic microorganisms. In this study, soilborne disease suppressive ability of seven water ACTs, extracted from five horticultural residue-based composts, from an animal waste anaerobic solid digestate and from a commercial municipal waste compost, was assessed using in vitro and in vivo systems. All the ACTs inhibited in vitro growth of Verticillium dahliae, Fusarium oxysporum f. sp. lycopersici, Rhizoctonia solani, Sclerotinia minor, Sclerotium rolfsii and Botrytis cinerea. Filter or thermal sterilization eliminated in vitro suppression, suggesting that microorganisms play key roles in pathogen inhibition. Drenching applications of raw ACTs have potential to reduced disease symptoms caused by R. solani on savoy cabbage, S. minor on lettuce and S. rolfsii on pepper, improved the biomass production and did not show any sign of phytotoxicity. Both in vitro and in vivo suppressiveness of ACTs may be explained by antagonistic  bacterial communities that provide general suppression activities. The metabolic BIOLOG GN and GP profiles reflected the functional potential of the numerically dominant members of the microbial communities used as inoculum. This study has demonstrated that useful resident microorganisms, including mainly Gram-positive and Gram-negative antagonistic bacteria, are likely to be responsible for biological control activity of ACTs

Functional Hyperspectral Imaging by High-Related Vegetation Indices to Track the Wide-Spectrum Trichoderma Biocontrol Activity Against Soil-Borne Diseases of Baby-Leaf Vegetables

Research has been increasingly focusing on the selection of novel and effective biological control agents (BCAs) against soil-borne plant pathogens. The large-scale application of BCAs requires fast and robust screening methods for the evaluation of the efficacy of high numbers of candidates. In this context, the digital technologies can be applied not only for early disease detection but also for rapid performance analyses of BCAs. The present study investigates the ability of different Trichoderma spp. to contain the development of main baby-leaf vegetable pathogens and applies functional plant imaging to select the best performing antagonists against multiple pathosystems. Specifically, sixteen different Trichoderma spp. strains were characterized both in vivo and in vitro for their ability to contain R. solani, S. sclerotiorum and S. rolfsii development. All Trichoderma spp. showed, in vitro significant radial growth inhibition of the target phytopathogens. Furthermore, biocontrol trials were performed on wild rocket, green and red baby lettuces infected, respectively, with R. solani, S. sclerotiorum and S. rolfsii. The plant status was monitored by using hyperspectral imaging. Two strains, Tl35 and Ta56, belonging to T. longibrachiatum and T. atroviride species, significantly reduced disease incidence and severity (DI and DSI) in the three pathosystems. Vegetation indices, calculated on the hyperspectral data extracted from the images of plant-Trichoderma-pathogen interaction, proved to be suitable to refer about the plant health status. Four of them (OSAVI, SAVI, TSAVI and TVI) were found informative for all the pathosystems analyzed, resulting closely correlated to DSI according to significant changes in the spectral signatures among health, infected and bio-protected plants. Findings clearly indicate the possibility to promote sustainable disease management of crops by applying digital plant imaging as large-scale screening method of BCAs' effectiveness and precision biological control support

Greenhouse application of light-drone imaging technology for assessing weeds severity occurring on baby-leaf red lettuce beds approaching fresh-cutting

Aim of study: For baby-leaf lettuces greenhouse cultivations the absence of weeds is a mandatory quality requirement. One of the most promising and innovative technologies in weed research, is the use of Unmanned Aerial Vehicles (or drones) equipped with acquisition systems. The aim of this study was to provide an estimation of the exact weed amount on baby-sized red lettuce beds using a light drone equipped with an RGB microcamera.Area of study: Trials were performed at specialized organic farm site in Eboli (Salerno, Italy), under polyethylene multi-tunnel greenhouse.Material and methods: The RGB images acquired were processed with specific algorithms distinguishing weeds from crop yields, estimating the weeds covered surface and the severity of weed contamination in terms of biomass. A regression between the percentage of the surface covered by weed (with respect to the image total surface) and the weight of weed (with respect to the total harvested biomass) was calculated.Main results: The regression between the total cover values of the 25 calibration images and the total weight measured report a significant linear correlation. Digital monitoring was able to capture with accuracy the highly variable weed coverage that, among the different grids positioned under real cultivation conditions, was in the range 0-16.4% of the total cultivated one.Research highlights: In a precision weed management context, with the aim of improving management and decreasing the use of pesticides, this study provided an estimation of the exact weed amount on baby-sized red lettuce beds using a light drone

Precision Agriculture Digital Technologies for Sustainable Fungal Disease Management of Ornamental Plants

Ornamental plant production constitutes an important sector of the horticultural industry worldwide and fungal infections, that dramatically affect the aesthetic quality of plants, can cause serious economic and crop losses. The need to reduce the use of pesticides for controlling fungal outbreaks requires the development of new sustainable strategies for pathogen control. In particular, early and accurate large-scale detection of occurring symptoms is critical to face the ambitious challenge of an effective, energy-saving, and precise disease management. Here, the new trends in digital-based detection and available tools to treat fungal infections are presented in comparison with conventional practices. Recent advances in molecular biology tools, spectroscopic and imaging technologies and fungal risk models based on microclimate trends are examined. The revised spectroscopic and imaging technologies were tested through a case study on rose plants showing important fungal diseases (i.e., spot spectroscopy, hyperspectral, multispectral, and thermal imaging, fluorescence sensors). The final aim was the examination of conventional practices and current e-tools to gain the early detection of plant diseases, the identification of timing and spacing for their proper management, reduction in crop losses through environmentally friendly and sustainable production systems. Moreover, future perspectives for enhancing the integration of all these approaches are discussed

Managing Rhizoctonia Damping-Off of Rocket (Eruca sativa) Seedlings by Drench Application of Bioactive Potato Leaf Phytochemical Extracts

Plants produce a huge array of secondary metabolites that play a key role in defense mechanisms against detrimental microorganisms and herbivores, and represent a suitable alternative to synthetic fungicides in sustainable agriculture. In this work, twelve crude hydroethanolic extracts derived from leaves of different potato cultivars were chemically characterized by LC/MS and their antioxidant properties were investigated in vitro. Furthermore, the biological activity against the fungal pathogen Rhizoctonia solani was evaluated both in vitro and in vivo. Extracts showed the ability to inhibit R. solani growth in vitro and significantly reduced damping-off incidence in in vivo experiments. Furthermore, R. solani mycelia exposed to the extracts showed an altered morphology (low translucency, irregular silhouette, and cytoplasmatic content coagulation) compared to the untreated control in light microscopy examination. Principal component analysis conducted on identified chemical compounds highlighted significant metabolic variations across the different extracts. In particular, those that inhibited most of the growth of the pathogen were found to be enriched in α-chaconine or α-solanine content, indicating that their biological activity is affected by the abundance of these metabolites. These results clearly indicated that plant-derived compounds represent a suitable alternative to chemicals and could lead to the development of new formulates for sustainable control of plant diseases

Municipal organic waste compost replaces mineral fertilization in the horticultural cropping systems, reducing the pollution risk

Municipal waste compost was evaluated under open field conditions for replacing synthetic fertilizers in a vegetable three-year succession. Three compost rates, 45 t ha–1, 30 t ha–1 and 15 t ha–1 (dry matter), and compost at 15 t ha–1 combined with 25%, and 50% of the full synthetic nitrogen rate, were compared to full and none synthetic nitrogen fertilizations. Crop succession was: tomato followed by endive in the first year; eggplant and, then, broccoli in the second year; tomato and, then, endive/broccoli, in the third year. The application of compost at a dose of at least 30 t ha–1 or at 15 t ha–1 with the addition of 25% of the full synthetic nitrogen rate, in Spring-Summer cycle, sustained growth and yield at levels comparable with those of synthetic nitrogen fertilization. However, only a very poor residual effect of the compost soil treatment on the yield of Autumn-Winter crops, was observed. Monitoring of nitrate content into the soil during cropping seasons, a reduction of the risk of groundwater pollution was displayed due to nitrates released by compost, respect to synthetic nitrogen fertilizer. The cumulative effects of compost application on soil properties were detected at the end of the field trials, registering changes in chemical parameters analysed, except for phosphorus and boron. Highlights - Municipal solid organic waste compost (MSWC) integrated with N fertilizers can sustain vegetable production. - MSWC (at least 30 t ha–1 d.w.) replaced synthetic fertilizers for tomato and eggplant productions. - N fertilizer integration to the compost residual effect is necessary to sustain endive and broccoli productions. - MSWC (at 15 t ha–1 d.w.) needs 25% of N integration to reduce the gap with plant only fertilized with N fertilizer. - MSWC preserved soil quality and avoided accumulation of undesired metals, such as Cu and Zn

Sage species case study on a spontaneous mediterranean plant to control phytopathogenic fungi and bacteria

Sage species belong to the family of Labiatae/Lamiaceae and are diffused worldwide. More than 900 species of sage have been identified, and many of them are used for different purposes, i.e., culinary uses, traditional medicines and natural remedies and cosmetic applications. Another use of sage is the application of non-distilled sage extracts and essential oils to control phytopathogenic bacteria and fungi, for a sustainable, environmentally friendly agriculture. Biocidal propriety of non-distilled extracts and essential oils of sage are w documented. Antimicrobial effects of these sage extracts/essential oils depend on both sage species and bacteria and fungi species to control. In general, it is possible to choose some specific extracts/essential oils to control specific phytopathogenic bacteria or fungi. In this context, the use of nanotechnology techniques applied to essential oil from salvia could represent a future direction for improving the performance of eco-compatible and sustainable plant defence and represents a great challenge for the future.The authors acknowledge the support of the research project: Nutraceutica come supporto nutrizionale nel paziente oncologico, CUP: B83D18000140007. E.B.S. acknowledges the sponsorship of the projects M-ERA-NET-0004/2015-PAIRED and UIDB/04469/2020 (strategic fund), receiving support from the Portuguese Science and Technology Foundation, Ministry of Science and Education (FCT/MEC) through national funds, and co-financed by FEDER, under the Partnership Agreement PT2020. The authors also acknowledge Agricultural Department of Campania Region (Italy) for financial support.info:eu-repo/semantics/publishedVersio

Polyketide synthases of Diaporthe helianthi and involvement of DhPKS1 in virulence on sunflower

Background The early phases of Diaporthe helianthi pathogenesis on sunflower are characterized by the production of phytotoxins that may play a role in host colonisation. In previous studies, phytotoxins of a polyketidic nature were isolated and purified from culture filtrates of virulent strains of D. helianthi isolated from sunflower. A highly aggressive isolate (7/96) from France contained a gene fragment of a putative nonaketide synthase (lovB) which was conserved in a virulent D. helianthi population. Results In order to investigate the role of polyketide synthases in D. helianthi 7/96, a draft genome of this isolate was examined. We were able to find and phylogenetically analyse 40 genes putatively coding for polyketide synthases (PKSs). Analysis of their domains revealed that most PKS genes of D. helianthi are reducing PKSs, whereas only eight lacked reducing domains. Most of the identified PKSs have orthologs shown to be virulence factors or genetic determinants for toxin production in other pathogenic fungi. One of the genes (DhPKS1) corresponded to the previously cloned D. helianthi lovB gene fragment and clustered with a nonribosomal peptide synthetase (NRPS) -PKS hybrid/lovastatin nonaketide like A. nidulans LovB. We used DhPKS1 as a case study and carried out its disruption through Agrobacterium-mediated transformation in the isolate 7/96. D. helianthi DhPKS1 deleted mutants were less virulent to sunflower compared to the wild type, indicating a role for this gene in the pathogenesis of the fungus. Conclusion The PKS sequences analysed and reported here constitute a new genomic resource that will be useful for further research on the biology, ecology and evolution of D. helianthi and generally of fungal plant pathogens

Phenolic Composition and Antioxidant and Antiproliferative Activities of the Extracts of Twelve Common Bean ( Phaseolus vulgaris

Beans are important dietary components with versatile health benefits. We analysed the extracts of twelve ecotypes of Phaseolus vulgaris in order to determine their phenolic profiles, antioxidant activity, and the in vitro antiproliferative activity. Ultra-performance liquid chromatography with diode array detector (UPLC-DAD) admitted us to detect and quantify some known polyphenols, such as gallic acid, chlorogenic acid, epicatechin, myricetin, formononetin, caffeic acid, and kaempferol. The antioxidant activity (AA) ranged from 1.568 ± 0.041 to 66.572 ± 3.197 mg necessary to inhibit the activity of the 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical by 50% (EC50). The extracts, except those obtained from the nonpigmented samples, were capable of inhibiting the proliferation of the human epithelial colorectal adenocarcinoma (Caco-2) cells, human breast cancer cells MCF-7, and A549 NSCLC cell line. Cultivars differed in composition and concentration of polyphenols including anthocyanins; cooking affected the antioxidant activity only marginally. Qualitative and quantitative differences in phenolic composition between the groups of beans influenced the biological activities; on the other hand, we did not find significant differences on the biological activities within the same variety, before and after cooking