Historical Synthesis-Analysis of Changes in Grain Nitrogen Dynamics in Sorghum

Citation: Ciampitti IA and Prasad PVV (2016) Historical Synthesis-Analysis of Changes in Grain Nitrogen Dynamics in Sorghum. Front. Plant Sci. 7:275. doi: 10.3389/fpls.2016.00275Unraveling the complexity underpinning nitrogen (N) use efficiency (NUE) can be physiologically approached via examining grain N sources and N internal efficiency (NIE) (yield to plant N content ratio). The main objective of this original research paper is to document and understand sorghum NUE and physiological mechanisms related to grain N dynamics. The study of different grain N sources, herein defined as the reproductive-stage shoot N remobilization (Remobilized N), reproductive-stage whole-plant N content (Reproductive N), and vegetative-stage whole-plant N content (Vegetative N), was pursued with the goal of synthesizing scientific literature for sorghum [Sorghum bicolor (L.) Moench] crop. A detailed literature review was performed and summarized on sorghum NUE (13 studies; >250 means) with three Eras, defined by the year of the study, named as Old Era (1965–1980); Transient Era (1981–2000); and New Era (2001–2014). The most remarkable outcomes from this synthesis were: (1) overall historical (1965–2014) cumulative yield gain was >0.5 Mg ha-1 (yields >7 Mg ha-1); (2) NIE did not change across the same time period; (3) grain N concentration (grain %N) accounted for a large proportion (63%) of the variation in NIE; (4) NIE increased as grain %N diminished, regardless of the Eras; (5) Remobilized N was strongly (>R2 0.6) and positively associated with Vegetative N, presenting a unique slope across Eras; and (6) a trade-off was documented for the Remobilized N and Reproductive N (with large variation, <R2) relationship, suggesting complex regulation processes governing N forces. Improvements in NUE are subjected to the interplay between N supply (N from non-reproductive organs) and grain N demand, sink- (driven by grain number) and source-modulated (via restriction of grain N demand)

Alterations in Wheat Pollen Lipidome during High Day and Night Temperature Stress

Understanding the adaptive changes in wheat pollen lipidome under high temperature (HT) stress is critical to improving seed set and developing HT tolerant wheat varieties. We measured 89 pollen lipid species under optimum and high day and/or night temperatures using electrospray ionization-tandem mass spectrometry in wheat plants. The pollen lipidome had a distinct composition compared to that of leaves. Unlike in leaves, 34:3 and 36:6 species dominated the composition of extraplastidic phospholipids in pollen under optimum and HT conditions. The most HT-responsive lipids were extraplastidic phospholipids, PC, PE, PI, PA, and PS. The unsaturation levels of the extraplastidic phospholipids decreased through the decreases in the levels of 18:3 and increases in the levels of 16:0, 18:0, 18:1, and 18:2 acyl chains. PC and PE were negatively correlated. Higher PC:PE at HT indicated possible PE-to-PC conversion, lower PE formation, or increased PE degradation, relative to PC. Correlation analysis revealed lipids experiencing coordinated metabolism under HT and confirmed the HT-responsiveness of extraplastidic phospholipids. Comparison of the present results on wheat pollen with results of our previous research on wheat leaves suggests that similar lipid changes contribute to HT adaptation in both leaves and pollen, though the lipidomes have inherently distinct compositions

Impact of high temperature stress on floret fertility and individual grain weight of grain sorghum: sensitive stages and thresholds for temperature and duration

Citation: Prasad PVV, Djanaguiraman M, Perumal R and Ciampitti IA (2015) Impact of high temperature stress on floret fertility and individual grain weight of grain sorghum: sensitive stages and thresholds for temperature and duration. Front. Plant Sci. 6:820. doi: 10.3389/fpls.2015.00820Sorghum [Sorghum bicolor (L.) Moench] yield formation is severely affected by high temperature stress during reproductive stages. This study pursues to (i) identify the growth stage(s) most sensitive to high temperature stress during reproductive development, (ii) determine threshold temperature and duration of high temperature stress that decreases floret fertility and individual grain weight, and (iii) quantify impact of high daytime temperature during floret development, flowering and grain filling on reproductive traits and grain yield under field conditions. Periods between 10 and 5 d before anthesis; and between 5 d before- and 5 d after-anthesis were most sensitive to high temperatures causing maximum decreases in floret fertility. Mean daily temperatures >25°C quadratically decreased floret fertility (reaching 0% at 37°C) when imposed at the start of panicle emergence. Temperatures ranging from 25 to 37°C quadratically decreased individual grain weight when imposed at the start of grain filling. Both floret fertility and individual grain weights decreased quadratically with increasing duration (0–35 d or 49 d during floret development or grain filling stage, respectively) of high temperature stress. In field conditions, imposition of temperature stress (using heat tents) during floret development or grain filling stage also decreased floret fertility, individual grain weight, and grain weight per panicle

Physiological and Molecular Mechanisms of Differential Sensitivity of Palmer Amaranth (Amaranthus palmeri) to Mesotrione at Varying Growth Temperatures

Citation: Godar, A. S., Varanasi, V. K., Nakka, S., Prasad, P. V. V., Thompson, C. R., & Mithila, J. (2015). Physiological and Molecular Mechanisms of Differential Sensitivity of Palmer Amaranth (Amaranthus palmeri) to Mesotrione at Varying Growth Temperatures. Plos One, 10(5), 17. doi:10.1371/journal.pone.0126731Herbicide efficacy is known to be influenced by temperature, however, underlying mechanism(s) are poorly understood. A marked alteration in mesotrione [a 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor] efficacy on Palmer amaranth (Amaranthus palmeri S. Watson) was observed when grown under low- (LT, 25/15 degrees C, day/night temperatures) and high (HT, 40/30 degrees C) temperature compared to optimum (OT, 32.5/22.5 degrees C) temperature. Based on plant height, injury, and mortality, Palmer amaranth was more sensitive to mesotrione at LT and less sensitive at HT compared to OT (ED50 for mortality; 18.5, 52.3, and 63.7 g ai ha(-1), respectively). Similar responses were observed for leaf chlorophyll index and photochemical efficiency of PSII (F-v/F-m). Furthermore, mesotrione translocation and metabolism, and HPPD expression data strongly supported such variation. Relatively more mesotrione was translocated to meristematic regions at LT or OT than at HT. Based on T-50 values (time required to metabolize 50% of the C-14 mesotrione), plants at HT metabolized mesotrione faster than those at LT or OT (T-50; 13, 21, and 16.5 h, respectively). The relative HPPD: CPS (carbamoyl phosphate synthetase) or HPPD:beta-tubulin expression in mesotrione-treated plants increased over time in all temperature regimes; however, at 48 HAT, the HPPD:beta-tubulin expression was exceedingly higher at HT compared to LT or OT (18.4-, 3.1-, and 3.5-fold relative to untreated plants, respectively). These findings together with an integrated understanding of other interacting key environmental factors will have important implications for a predictable approach for effective weed management

Implications of high temperature and elevated CO2on flowering time in plants

Citation: Jagadish, S. V. K., Bahuguna, R. N., Djanaguiraman, M., Gamuyao, R., Prasad, P. V. V., & Craufurd, P. Q. (2016). Implications of high temperature and elevated CO2on flowering time in plants. Frontiers in Plant Science, 7. doi:10.3389/fpls.2016.00913Flowering is a crucial determinant for plant reproductive success and seed-set. Increasing temperature and elevated carbon-dioxide (e[CO2]) are key climate change factors that could affect plant fitness and flowering related events. Addressing the effect of these environmental factors on flowering events such as time of day of anthesis (TOA) and flowering time (duration from germination till flowering) is critical to understand the adaptation of plants/crops to changing climate and is the major aim of this review. Increasing ambient temperature is the major climatic factor that advances flowering time in crops and other plants, with a modest effect of e[CO2]. Integrated environmental stimuli such as photoperiod, temperature and e[CO2] regulating flowering time is discussed. The critical role of plant tissue temperature influencing TOA is highlighted and crop models need to substitute ambient air temperature with canopy or floral tissue temperature to improve predictions. A complex signaling network of flowering regulation with change in ambient temperature involving different transcription factors (PIF4, PIF5), flowering suppressors (HvODDSOC2, SVP, FLC) and autonomous pathway (FCA, FVE) genes, mainly from Arabidopsis, provides a promising avenue to improve our understanding of the dynamics of flowering time under changing climate. Elevated CO2mediated changes in tissue sugar status and a direct [CO2]-driven regulatory pathway involving a key flowering gene, MOTHER OF FT AND TFL1 (MFT), are emerging evidence for the role of e[CO2] in flowering time regulation. © 2016 Jagadish, Bahuguna, Djanaguiraman, Gamuyao, Prasad and Craufurd

Nano-oxides immobilize cadmium, lead, and zinc in mine spoils and contaminated soils facilitating plant growth

Nanoparticles with high reactivity can be applied as amendments to remediate soil metal contaminations by immobilizing toxic elements. Nano-oxides of Fe have been studied but Al and Ti nano-oxides have not been tested for their remediation capacity of toxic metals. The potential of synthesized iron (Fe-O), aluminum (Al-O), and titanium (Ti-O) nano-oxides for stabilizing Cd, Pb, and Zn in mine spoil (Chat) and contaminated soil was compared using adsorption studies and a greenhouse experiment. Chat and soil were amended with nanooxides at two rates (25 and 50 g·kg−1) and a pot experiment was conducted with sorghum (Sorghum bicolor L. Moench). Leachates were collected twice per week from plant emergence to harvest at maturity and metals were compared against an unamended control. Chat was contaminated with Cd, Pb, and Zn at 84, 1583, and 6154 mg·kg−1, and soil at 15, 1260, and 3082 mg·kg−1, respectively. Adsorption conformed to the Langmuir linear isotherm and adsorption maxima of metals were in the order of Al-O > Ti-O ≥ Fe-O. Nano-oxides reduced Cd concentration by 28% (Fe-O) to 87% (Ti-O) and Zn concentration by 14% (Fe-O) to 85% (Al-O) in plant tissues compared with unamended Chat. Nano-oxides significantly reduced Cd, Pb, and Zn in leachates and available Cd and Zn in Chat/soil relative to the respective unamended controls. Nano-oxides can be used to remediate heavy metal contaminated Chat and soil and facilitate plant growth under proper nutrient supplements. Nano-oxides of Al-O and Ti-O remediated metals more effectively than Fe-O."We thank the Department of Agronomy at Kansas State University for providing the facilities and materials to conduct this research. Contribution No. 21-074-J from Kansas Agricultural Experiment Station. The first author received the Fulbright Visiting Scholar Fellowship and wishes to acknowledge the CIES, USA Fulbright Program for funding the visit to KSU."https://cdnsciencepub.com/doi/10.1139/cjss-2020-012

Population genomics of pearl millet (Pennisetum glaucum (L.) R. Br.): Comparative analysis of global accessions and Senegalese landraces

Citation: Hu, Z., Mbacké, B., Perumal, R., Guèye, M. C., Sy, O., Bouchet, S., . . . Morris, G. P. (2015). Population genomics of pearl millet (Pennisetum glaucum (L.) R. Br.): Comparative analysis of global accessions and Senegalese landraces. Bmc Genomics. doi:10.1186/s12864-015-2255-0Background: Pearl millet is a staple food for people in arid and semi-arid regions of Africa and South Asia due to its high drought tolerance and nutritional qualities. A better understanding of the genomic diversity and population structure of pearl millet germplasm is needed to support germplasm conservation and genetic improvement of this crop. Here we characterized two pearl millet diversity panels, (i) a set of global accessions from Africa, Asia, and the America, and (ii) a collection of landraces from multiple agro-ecological zones in Senegal. Results: We identified 83,875 single nucleotide polymorphisms (SNPs) in 500 pearl millet accessions, comprised of 252 global accessions and 248 Senegalese landraces, using genotyping by sequencing (GBS) of PstI-MspI reduced representation libraries. We used these SNPs to characterize genomic diversity and population structure among the accessions. The Senegalese landraces had the highest levels of genetic diversity (?), while accessions from southern Africa and Asia showed lower diversity levels. Principal component analyses and ancestry estimation indicated clear population structure between the Senegalese landraces and the global accessions, and among countries in the global accessions. In contrast, little population structure was observed across in the Senegalese landraces collections. We ordered SNPs on the pearl millet genetic map and observed much faster linkage disequilibrium (LD) decay in Senegalese landraces compared to global accessions. A comparison of pearl millet GBS linkage map with the foxtail millet (Setaria italica) and sorghum (Sorghum bicolor) genomes indicated extensive regions of synteny, as well as some large-scale rearrangements in the pearl millet lineage. Conclusions: We identified 83,875 SNPs as a genomic resource for pearl millet improvement. The high genetic diversity in Senegal relative to other regions of Africa and Asia supports a West African origin of this crop, followed by wide diffusion. The rapid LD decay and lack of confounding population structure along agro-ecological zones in Senegalese pearl millet will facilitate future association mapping studies. Comparative population genomics will provide insights into panicoid crop evolution and support improvement of these climate-resilient crops. © 2015 Hu et al

Winter pea mixtures with triticale and oat for biogas and methane production in semiarid conditions of the south Pannonian Basin

Due to the increase in greenhouse gases from burning fossil fuels, there is increased attention on renewable energy sources from specialized crops. These crops should not compete with food security, and it is important to select plant resources which can produce methane-rich biogas efficiently. The most commonly used energy crops are planted and managed intensively with high inputs in productive land, and this negatively affects land use and sustainable use of resources. The main purposes of this study are to: (a) determine the best cropping system for optimal biogas and methane production from sole crops of winter pea, triticale and out and their mixtures at two different maturity stages (first stage: full-flowering stage of winter pea and beginning of milky stage of cereals; second stage: emergence of firsts pods for pea and milky/waxy stage of cereals); and (b) to develop and use a surface model to determine the best combinations of various mixtures that result in highest biogas and methane. The used pure or mixtures of pea, oat and triticale in two seed weight ratios (50%:50% and 75%:25%) produced different green mass, dry matter, solids, biogas and methane yields. The experiments showed that maximum green mass was produced by the mixture of pea and oat at the seed ratio 75%:25% and when crop was harvested at the full-flowering stage of winter pea and beginning of the milky stage of cereals. After quadratic model analyses, the combination ratios of the oat and triticale were, respectively, 30% and 8%, with a maximum green biomass yield of 61.48 t ha-1, while the corresponding values were 28% and 38%, with maximum solids yields of 25.64 t ha-1. As the model was set at 100 for all three independent variables (oat, triticale and pea), the pea should be at 62% (100-30-8) and 34% (100-28-38), respectively, for green mass and organic solids yields. The results of surface analysis and multivariate analysis of variance showed that the mixture of oat and triticale had great potentiality for biogas and methane yields. The optimal mixture of oat with triticale was 27-35% with 73-65% for producing biogas and (or) methane

Pelleted manure compost improves mine spoil properties enhancing plant growth and phyto-stabilization of potentially toxic metals

Feedlotmanure is rich in plant nutrients and can immobilize potentially toxic metals. However, pelleted manure compost as an amendment material in mine spoils (chat) is not well studied. This study was conducted to investigate the impact of pelleted cattle manure on improving chat properties facilitating phyto-stabilization and the establishment of grasses. A greenhouse pot experiment was conducted with unamended and amended chat (lime treated) with pelleted manure at three rates (60, 120, and 180 Mg ha−1) with and without bentonite (B), using two native grasses, switchgrass (Panicum virgatum L.) and wheatgrass (Pascopyrum smithii (Rydb.) A. Löve). Leachates from pots were collected periodically until harvest. Nutrients and metal concentrations were measured in chat treatments, and metal concentrations were measured in plant tissues and leachates. Manure-amended chat reduced leachate Cd and Zn on average by >75% and >80%, respectively. Above-ground dry matter yield increased by >2.5-fold and >4-fold, respectively, in switchgrass and wheatgrass with the increase of 3-fold manure rate. The manure rate at 180 Mg ha−1 reduced plant Cd and Zn by 50% and 20%, respectively, in wheatgrass, and 30% and no reduction, respectively, in switchgrass, compared to the 60 Mg ha−1 manure rate. Overall, pelleted manure compost significantly increased available nutrients and decreased available metals in amended chat, with no significant effect of B. This study indicated that pelleted manure, preferably at 180 Mg ha−1 rate with lime, can be used in acidic metal-contaminated chat to facilitate the establishment of perennial native grasses and reduce the potentially toxic metal availability."The authors thank the Department of Agronomy at Kansas State University for providing the facilities and materials to conduct this research. The first author received the Fulbright Visiting Scholar Fellowship and wishes to acknowledge the USA Fulbright Program for funding the visit to Kansas State University. We acknowledge the University of Winnipeg for financial support for the publication of research."https://cdnsciencepub.com/doi/10.1139/cjss-2021-015

Predicting corn tiller development in restrictive environments can be achieved to enhance defensive management decision tools for producers

IntroductionWhile globally appreciated for reliable, intensification-friendly phenotypes, modern corn (Zea mays L.) genotypes retain crop plasticity potential. For example, weather and heterogeneous field conditions can overcome phenotype uniformity and facilitate tiller expression. Such plasticity may be of interest in restrictive or otherwise variable environments around the world, where corn production is steadily expanding. No substantial effort has been made in available literature to predict tiller development in field scenarios, which could provide insight on corn plasticity capabilities and drivers. Therefore, the objectives of this investigation are as follows: 1) identify environment, management, or combinations of these factors key to accurately predict tiller density dynamics in corn; and 2) test outof-season prediction accuracy for identified factors.MethodsReplicated field trials were conducted in 17 diverse site-years in Kansas (United States) during the 2019, 2020, and 2021 seasons. Two modern corn genotypes were evaluated with target plant densities of 25000, 42000, and 60000 plants ha -1. Environmental, phenological, and morphological data were recorded and evaluated with generalized additive models.ResultsPlant density interactions with cumulative growing degree days, photothermal quotient, mean minimum and maximum daily temperatures, cumulative vapor pressure deficit, soil nitrate, and soil phosphorus were identified as important predictive factors of tiller density. Many of these factors had stark non-limiting thresholds. Factors impacting growth rates and photosynthesis (specifically vapor pressure deficit and maximum temperatures) were most sensitive to changes in plant density. Out-of-season prediction errors were seasonally variable, highlighting model limitations due to training datasets.DiscussionThis study demonstrates that tillering is a predictable plasticity mechanism in corn, and therefore could be incorporated into decision tools for restrictive growing regions. While useful for diagnostics, these models are limited in forecast utility and should be coupled with appropriate decision theory and risk assessments for producers in climatically and socioeconomically vulnerable environments