Extracting topological features from dynamical measures in networks of Kuramoto oscillators

The Kuramoto model for an ensemble of coupled oscillators provides a paradigmatic example of non-equilibrium transitions between an incoherent and a synchronized state. Here we analyze populations of almost identical oscillators in arbitrary interaction networks. Our aim is to extract topological features of the connectivity pattern from purely dynamical measures, based on the fact that in a heterogeneous network the global dynamics is not only affected by the distribution of the natural frequencies, but also by the location of the different values. In order to perform a quantitative study we focused on a very simple frequency distribution considering that all the frequencies are equal but one, that of the pacemaker node. We then analyze the dynamical behavior of the system at the transition point and slightly above it, as well as very far from the critical point, when it is in a highly incoherent state. The gathered topological information ranges from local features, such as the single node connectivity, to the hierarchical structure of functional clusters, and even to the entire adjacency matrix.Comment: 11 pages, 10 figure

Autonomous clustering using rough set theory

This paper proposes a clustering technique that minimises the need for subjective human intervention and is based on elements of rough set theory. The proposed algorithm is unified in its approach to clustering and makes use of both local and global data properties to obtain clustering solutions. It handles single-type and mixed attribute data sets with ease and results from three data sets of single and mixed attribute types are used to illustrate the technique and establish its efficiency

Character Analysis In The Banisteriopsis Campestris Complex (Malpighiaceae), Using Spatial Auto‐Correlation

Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/149728/1/tax02450.pd

Phylomemetics—Evolutionary Analysis beyond the Gene

Genes are propagated by error-prone copying, and the resulting variation provides the basis for phylogenetic reconstruction of evolutionary relationships. Horizontal gene transfer may be superimposed on a tree-like evolutionary pattern, with some relationships better depicted as networks. The copying of manuscripts by scribes is very similar to the replication of genes, and phylogenetic inference programs can be used directly for reconstructing the copying history of different versions of a manuscript text. Phylogenetic methods have also been used for some time to analyse the evolution of languages and the development of physical cultural artefacts. These studies can help to answer a range of anthropological questions. We propose the adoption of the term “phylomemetics” for phylogenetic analysis of reproducing non-genetic elements

Phenetic distances in the Drosophila melanogaster-subgroup species and oviposition-site preference for food components

Oviposition-site preferences (O.S.P.) have been investigated in females of six sibling species of the Drosophila melanogaster subgroup. O.S.P. were determined for standard food components and yeast genotypes. Females of all species showed a strong preference for complete medium and avoidance of pure agar as an egg-deposition site.\ud \ud Ecological trees of the species on the basis of rank correlations were constructed. In ‘no-choice’ situations they agree with phylogenetic trees obtained by different means but in ‘choice’ situations they do not agree too well.\ud \ud All species showed a high egg production on live yeast compared with standard medium (with killed yeast) and D. erecta females demonstrated discrimination between yeast genotypes. Niche breadth calculated from survival on the sterol mutant yeasts correlated fairly well with phylogenetic trees

Morphological and molecular analysis of natural hybrids between the diploid Centaurea aspera L. and the tetraploid C. seridis L. (Compositae)

[EN] Polyploidy and hybridisation are the basis of the evolution of Centaurea (Compositae). At the El Saler dune field (eastern Spain), the diploid Centaurea aspera ssp. stenophylla and the tetraploid C. seridis ssp. maritima form a polyploid complex in which C. x subdecurrens individuals occur. This polyploid complex was analysed morphologically and genetically, using random amplified polymorphic DNA (RAPD) and tubulin-based polymorphism (TBP) markers. Flow cytometry showed that the hybrids are triploid, which is a rare finding in Centaurea. Morphologically, in contrast to leaf characters, flowering characters clearly discriminated the three taxa. The genetic analyses confirm that C. x subdecurrens is a result of the hybridisation between Centaurea aspera ssp. stenophylla and C. seridis ssp. maritima, and suggest that backcrossing events and gene flow are very rare or absent. Although the hybrids likely represent true F1 offspring, they displayed some genetic diversity that is probably due to the combination of alleles. Genetic diversity was higher in diploid than in tetraploid individuals. This fact, and the high degree of sterility of the triploid hybrids, may reflect a cytotype minority exclusion effect. This may cause spatial segregation, which effectively takes place in the study area. Dune disturbance may lead to an overlapping of the parents' distribution areas, facilitating hybridisation.This work is posthumously dedicated to Antonio Samo Lumbreras, to whom we are very grateful for all his help. This study was sponsored by the Valencian Government (Research Project GVPRE/2008/130) and the Universitat Politecnica de Valencia (Research Project Ref. 3241).Ferriol Molina, M.; Garmendia, A.; Ruiz, J.; Merle Farinós, HB.; Boira Tortajada, H. (2012). Morphological and molecular analysis of natural hybrids between the diploid Centaurea aspera L. and the tetraploid C. seridis L. (Compositae). Plant Biosystems. 146(1):86-100. https://doi.org/10.1080/11263504.2012.727878S86100146

Bostonia: The Boston University Alumni Magazine. Volume 10

Founded in 1900, Bostonia magazine is Boston University's main alumni publication, which covers alumni and student life, as well as university activities, events, and programs