Modeling Water Pollution of Soil

The government of the Czech Republic decided that in the location to the west of Prague, capital city of the Czech Republic, some deep mines should be closed because of their low efficiency of coal mined i.e. small amounts and low quality of the coal extracted in the final stage of mining. The locations near Prague influenced the decision to do maintenance on the abandoned mines, as the thread of soil pollution was unacceptably high in the neighborhood of the capital city. Before the mines were closed it was necessary to separate existed extensive horizontal location of salt water below a clay layer in order not to deteriorate the upper fresh water. The salt water could not be allowed to pollute the upper layer with the fresh water, as many wells in villages in the neighborhood of the former mines would be contaminated. Two horizontal clay layers (an insulator and a semi-insulator) separated the two horizons containing salt water and fresh water. Before starting deep mining, vertical shafts had to be constructed with concrete linings to enable the miners to access the depths. The salt water was draining away throughout the existence of the mine. The drainage was designed very carefully to avoid possible infiltration of salt water into the upper horizon. Before the mines were abandoned it was necessary to prevent contact between the two kinds of waters in the shafts. Several options were put forward, the most efficient of which appeared to be one that proposed filling the shafts with spoil soil and creating a joint seal made of disparate material at the interface between the salt water and fresh water to create a reliable stopper. The material for the spoil soil was delivered from deposits located not far from the shafts. This material consisted of a variety of grains of sand, big boulders of slate, slaty clay, sandstone, etc.. Chemical admixtures were considered to improve the flocculation of the filling material. The stopper was positioned at a depth of 220–300 m below the terrain. As an alternative, thinner stoppers were considered, but this option was discarded.The aim of this paper is to describe the design of the stoppers applied to separate the two types of water along the contact horizon using Desai’s DSC theory (Distinct State Concept), and generalized plane strain in the multiphase problem of water flow in a porous medium. In addition, a comparison of some results from scale experimental models with numerical solutions was carried out. The intrinsic material properties of stoppers for numerical computations were obtained from physical and chemical laboratory tests. The models were evaluated for the complete underground work, particularly in its final stage of construction.

Experimental Analysis of Sandstone and Travertine

Sandstone and travertine are sedimentary rocks. The former is clastic, while the latter is sourced by chemical precipitation from hot springs. Their applications in civil engineering structures are mostly influenced by the ability to carry compression loading. A three-point bending experiment is usually used to determine material characteristics. However it does not correspond very well to applicatiosn in structures. For this reason we used a uniaxial compression test to obtain the modulus of elasticity and the stress-strain diagram. To obtain detailed information about the crystalline structure of sandstone and travertine a microscopic analysis wascarried out, using optical microscopy and an EDAX multichannel spectrometer for elementary microanalysis.

Molecular and cytogenetic characterization of wild Musa species

All relevant data are within the paper and its Supporting Information files.The production of bananas is threatened by rapid spreading of various diseases and adverse environmental conditions. The preservation and characterization of banana diversity is essential for the purposes of crop improvement. The world's largest banana germplasm collection maintained at the Bioversity International Transit Centre (ITC) in Belgium is continuously expanded by new accessions of edible cultivars and wild species. Detailed morphological and molecular characterization of the accessions is necessary for efficient management of the collection and utilization of banana diversity. In this work, nuclear DNA content and genomic distribution of 45S and 5S rDNA were examined in 21 diploid accessions recently added to ITC collection, representing both sections of the genus Musa. 2C DNA content in the section Musa ranged from 1.217 to 1.315 pg. Species belonging to section Callimusa had 2C DNA contents ranging from 1.390 to 1.772 pg. While the number of 45S rDNA loci was conserved in the section Musa, it was highly variable in Callimusa species. 5S rRNA gene clusters were found on two to eight chromosomes per diploid cell. The accessions were genotyped using a set of 19 microsatellite markers to establish their relationships with the remaining accessions held at ITC. Genetic diversity done by SSR genotyping platform was extended by phylogenetic analysis of ITS region. ITS sequence data supported the clustering obtained by SSR analysis for most of the accessions. High level of nucleotide diversity and presence of more than two types of ITS sequences in eight wild diploids pointed to their origin by hybridization of different genotypes. This study significantly expands the number of wild Musa species where nuclear genome size and genomic distribution of rDNA loci is known. SSR genotyping identified Musa species that are closely related to the previously characterized accessions and provided data to aid in their classification. Sequence analysis of ITS region provided further information about evolutionary relationships between individual accessions and suggested that some of analyzed accessions were interspecific hybrids and/or backcross progeny

Brane versus shell cosmologies in Einstein and Einstein-Gauss-Bonnet theories

We first illustrate on a simple example how, in existing brane cosmological models, the connection of a 'bulk' region to its mirror image creates matter on the 'brane'. Next, we present a cosmological model with no $Z_2$ symmetry which is a spherical symmetric 'shell' separating two metrically different 5-dimensional anti-de Sitter regions. We find that our model becomes Friedmannian at late times, like present brane models, but that its early time behaviour is very different: the scale factor grows from a non-zero value at the big bang singularity. We then show how the Israel matching conditions across the membrane (that is either a brane or a shell) have to be modified if more general equations than Einstein's, including a Gauss-Bonnet correction, hold in the bulk, as is likely to be the case in a low energy limit of string theory. We find that the membrane can then no longer be treated in the thin wall approximation. However its microphysics may, in some instances, be simply hidden in a renormalization of Einstein's constant, in which cases Einstein and Gauss-Bonnet membranes are identical.Comment: 15 pages, submitted to Phys. Rev.

Replacement of the First GnRH Administration in the Ovsynch Protocol by Selecting Cows According to the Stage of Follicular Development

The aim of the study was to replace the first GnRH in the Ovsynch protocol by selecting cows bearing corpus luteum as well as follicles in a defined stage of development at PGF2α administration. Additionally, various terms of GnRH administration after PGF2α were tested. Seventy five non-pregnant cows bearing corpus luteum were divided into groups according to the phase of follicular development on D 0 (day of PGF2α administration)-growth (GR, follicles 3.0-7.9 mm in diameter), early dominance (ED, dominant follicle 8.0-14.9 mm) and late dominance (LD, dominant follicle 15.0-23.0 mm). In addition, the cows were divided into groups according to the terms of GnRH administration (24, 48 or 72 h after PGF2α). In this way, groups GR 48 (n = 5), GR 72 (n = 6), ED 24 (n = 10), ED 48 (n = 12), ED 72 (n = 12), LD 24 (n = 10), LD 48 (n = 10) and LD 72 (n = 10) were established. Growth of ovulatory follicle, term of ovulation, insemination and conception rates as well as relation of the size of preovulatory follicle (day of ovulation) to the size of following corpus luteum (day 14) were evaluated. The highest level of synchronization of ovulation (100% on D 3) as well as conception rate (50%) was achieved in group ED 48. This protocol gives an opportunity of timing artificial insemination to 18-24 hours after GnRH administration, as ovulation occurs with a high probability within 24 - 48 hours after GnRH administration

On linearized gravity in the Randall-Sundrum scenario

In the literature about the Randall-Sundrum scenario one finds on one hand that there exist (small) corrections to Newton's law of gravity on the brane, and on another that the exact (and henceforth linearized) Einstein equations can be recovered on the brane. The explanation for these seemingly contradictory results is that the behaviour of the bulk far from the brane is different in both models. We show that explicitely in this paper.Comment: 12 pages, plain TeX, no figure

Fine-mapping of the Rpt5 net blotch resistance gene region in barley

Poster

Traditional banana diversity in Oceania: an endangered heritage

This study aims to understand the genetic diversity of traditional Oceanian starchy bananas in order to propose an efficient conservation strategy for these endangered varieties. SSR and DArT molecular markers are used to characterize a large sample of Pacific accessions, from New Guinea to Tahiti and Hawaii. All Pacific starchy bananas are shown of New Guinea origin, by interspecific hybridization between Musa acuminata (AA genome), more precisely its local subspecies M. acuminata ssp. banksii, and M. balbisiana (BB genome) generating triploid AAB Pacific starchy bananas. These AAB genotypes do not form a subgroup sensu stricto and genetic markers differentiate two subgroups across the three morphotypes usually identified: Iholena versus Popoulu and Maoli. The Popoulu/Maoli accessions, even if morphologically diverse throughout the Pacific, cluster in the same genetic subgroup. However, the subgroup is not strictly monophyletic and several close, but different genotypes are linked to the dominant genotype. One of the related genotypes is specific to New Caledonia (NC), with morphotypes close to Maoli, but with some primitive characters. It is concluded that the diffusion of Pacific starchy AAB bananas results from a series of introductions of triploids originating in New Guinea area from several sexual recombination events implying different genotypes of M. acuminata ssp. banksii. This scheme of multiple waves from the New Guinea zone is consistent with the archaeological data for peopling of the Pacific. The present geographic distribution suggests that a greater diversity must have existed in the past. Its erosion finds parallels with the erosion of cultural traditions, inexorably declining in most of the Polynesian or Melanesian Islands. Symmetrically, diversity hot spots appear linked to the local persistence of traditions: Maoli in New Caledonian Kanak traditions or Iholena in a few Polynesian islands. These results will contribute to optimizing the conservation strategy for the ex-situ Pacific Banana Collection supported collectively by the Pacific countries

Molecular and cytological characterization of the global Musa germplasm collection provides insights into the treasure of banana diversity

Bananas (Musa spp.) are one of the main fruit crops grown worldwide. With the annual production reaching 144 million tons, their production represents an important contribution to the economies of many countries in Asia, Africa, Latin-America and Pacific Islands. Most importantly, bananas are a staple food for millions of people living in the tropics. Unfortunately, sustainable banana production is endangered by various diseases and pests, and the breeding for resistant cultivars relies on a far too small base of genetic variation. Greater diversity needs to be incorporated in breeding, especially of wild species. Such work requires a large and thoroughly characterized germplasm collection, which also is a safe depository of genetic diversity. The largest ex situ Musa germplasm collection is kept at the International Transit Centre (ITC) in Leuven (Belgium) and currently comprises over 1500 accessions. This report summarizes the results of systematic cytological and molecular characterization of the Musa ITC collection. By December 2015, 630 accessions have been genotyped. The SSR markers confirmed the previous morphological based classification for 84% of ITC accessions analyzed. The remaining 16% of the genotyped entries may need field verification by taxonomist to decide if the unexpected classification by SSR genotyping was correct. The ploidy level estimation complements the molecular data. The genotyping continues for the entire ITC collection, including newly introduced accessions, to assure that the genotype of each accession is known in the largest global Musa gene bank