Comparative Dissimilation of Xylose and Glucose by Escherichia coli and Citrobacter anindolicum

The dissimilative action of Escherichia coli, Citrobacter anindolicum and various organisms of the intermediate groups on xylose and on dextrose was studied under comparable conditions with the aim of postulating a mechanism of the breakdown of the xylose molecule. It was found in many cases that there were significant differences in the ratios of the end products obtained from the two sugars. The products found were H2, CO2, formic, acetic, lactic, and succinic acids, and ethyl alcohol. Acetaldehyde could be isolated by means of sodium bisulphite during the fermentative process

A landscape perspective of Holocene organic carbon cycling in coastal SW Greenland lake-catchments

Arctic organic carbon (OC) stores are substantial and have accumulated over millennia as a function of changes in climate and terrestrial vegetation. Arctic lakes are also important components of the regional C-cycle as they are sites of OC production and CO2emissions but also store large amounts of OC in their sediments. This sediment OC pool is a mixture derived from terrestrial and aquatic sources, and sediment cores can therefore provide a long-term record of the changing interactions between lakes and their catchments in terms of nutrient and C transfer. Sediment carbon isotope composition (δ13C), C/N ratio and organic C accumulation rates (C AR) of14C-dated cores covering the last ∼10,000 years from six lakes close to Sisimiut (SW Greenland) are used to determine the extent to which OC dynamics reflect climate relative to lake or catchment characteristics. Sediment δ13C ranges from −19 to −32‰ across all lakes, while C/N ratios are 20 (mean = 12), values that indicate a high proportion of the organic matter is from autochthonous production but with a variable terrestrial component. Temporal trends in δ13C are variable among lakes, with neighbouring lakes showing contrasting profiles, indicative of site-specific OC processing. The response of an individual lake reflects its morphometry (which influences benthic primary production), the catchment:lake ratio, and catchment relief, lakes with steeper catchments sequester more carbon. The multi-site, landscape approach used here highlights the complex response of individual lakes to climate and catchment disturbance, but broad generalisations are possible. Regional Neoglacial cooling (from ∼5000 cal yr BP) influenced the lateral transfer of terrestrial OC to lakes, with three lakes showing clear increases in OC accumulation rate. The lakes likely switched from being autotrophic (i.e. net ecosystem production > ecosystem respiration) in the early Holocene to being heterotrophic after 5000 cal yr BP as terrestrial OC transfer increased

Temporal Stability of Seagrass Extent, Leaf Area, and Carbon Storage in St. Joseph Bay, Florida: A Semi-Automated Remote Sensing Analysis

Seagrasses are globally recognized for their contribution to blue carbon sequestration. However, accurate quantification of their carbon storage capacity remains uncertain due, in part, to an incomplete inventory of global seagrass extent and assessment of its temporal variability. Furthermore, seagrasses are undergoing significant decline globally, which highlights the urgent need to develop change detection techniques applicable to both the scale of loss and the spatial complexity of coastal environments. This study applied a deep learning algorithm to a 30-year time series of Landsat 5 through 8 imagery to quantify seagrass extent, leaf area index (LAI), and belowground organic carbon (BGC) in St. Joseph Bay, Florida, between 1990 and 2020. Consistent with previous field-based observations regarding stability of seagrass extent throughout St. Joseph Bay, there was no temporal trend in seagrass extent (23 ± 3 km2, τ = 0.09, p = 0.59, n = 31), LAI (1.6 ± 0.2, τ = -0.13, p = 0.42, n = 31), or BGC (165 ± 19 g C m−2, τ = - 0.01, p = 0.1, n = 31) over the 30-year study period. There were, however, six brief declines in seagrass extent between the years 2004 and 2019 following tropical cyclones, from which seagrasses recovered rapidly. Fine-scale interannual variability in seagrass extent, LAI, and BGC was unrelated to sea surface temperature or to climate variability associated with the El Niño-Southern Oscillation or the North Atlantic Oscillation. Although our temporal assessment showed that seagrass and its belowground carbon were stable in St. Joseph Bay from 1990 to 2020, forecasts suggest that environmental and climate pressures are ongoing, which highlights the importance of the method and time series presented here as a valuable tool to quantify decadal-scale variability in seagrass dynamics. Perhaps more importantly, our results can serve as a baseline against which we can monitor future change in seagrass communities and their blue carbon

Plasma deconvolution identifies broadly neutralizing antibodies associated with hepatitis C virus clearance

A vaccine for hepatitis C virus (HCV) is urgently needed. Development of broadly neutralizing plasma antibodies during acute infection is associated with HCV clearance, but the viral epitopes of these plasma antibodies are unknown. Identifying these epitopes could define the specificity and function of neutralizing antibodies (NAbs) that should be induced by a vaccine. Here, we present the development and application of a high-throughput method that deconvolutes polyclonal anti-HCV NAbs in plasma, delineating the epitope specificities of anti-HCV NAbs in acute-infection plasma of 44 humans with subsequent clearance or persistence of HCV. Remarkably, we identified multiple broadly neutralizing antibody combinations that were associated with greater plasma neutralizing breadth and with HCV clearance. These studies have the potential to inform new strategies for vaccine development by identifying broadly neutralizing antibody combinations in plasma associated with the natural clearance of HCV, while also providing a high-throughput assay that could identify these responses after vaccination trials

Simulated Response of St. Joseph Bay, Florida, Seagrass Meadows and Their Belowground Carbon to Anthropogenic and Climate Impacts

Seagrass meadows are degraded globally and continue to decline in areal extent due to human pressures and climate change. This study used the bio-optical model GrassLight to explore the impact of climate change and anthropogenic stressors on seagrass extent, leaf area index (LAI) and belowground organic carbon (BGC) in St. Joseph Bay, Florida, using water quality data and remotely-sensed sea surface temperature (SST) from 2002 to 2020. Model predictions were compared with satellite-derived measurements of seagrass extent and shoot density from the Landsat images for the same period. The GrassLight-derived area of potential seagrass habitat ranged from 36.2 km2 to 39.2 km2, averaging 38.0 ± 0.8 km2 compared to an observed seagrass extent of 23.0 ± 3.0 km2 derived from Landsat (range = 17.9–27.4 km2). GrassLight predicted a mean seagrass LAI of 2.7 m2 leaf m−2 seabed, compared to a mean LAI of 1.9 m2 m−2 estimated from Landsat, indicating that seagrass density in St. Joseph Bay may have been below its light-limited ecological potential. Climate and anthropogenic change simulations using GrassLight predicted the impact of changes in temperature, pH, chlorophyll a, chromophoric dissolved organic matter and turbidity on seagrass meadows. Simulations predicted a 2–8% decline in seagrass extent with rising temperatures that was offset by a 3–11% expansion in seagrass extent in response to ocean acidification when compared to present conditions. Simulations of water quality impacts showed that a doubling of turbidity would reduce seagrass extent by 18% and total leaf area by 21%. Combining climate and water quality scenarios showed that ocean acidification may increase seagrass productivity to offset the negative effects of both thermal stress and declining water quality on the seagrasses growing in St. Joseph Bay. This research highlights the importance of considering multiple limiting factors in understanding the effects of environmental change on seagrass ecosystems

Mars Sulfate Formation Sourced in Sulfide-Enriched Subsurface Fluids: The Rio Tinto Model

The extensive evidence for sulfate deposits on Mars provided by analyses of MER and Mars Express data shows that the sulfur played an essential role in the geochemical cycles of the planet, including reservoirs in the atmosphere, hydro-sphere and geosphere. Overall the data are consistent with a fluvial/lacustrine-evaporative origin of at least some of the sulfate deposits, with mineral precipitation through oversaturation of salty acidic fluids enriched in sulfates. This scenario requires reservoirs of sulfur and associated cations, as well as an acidic and oxidizing hydrochemistry which could be provided by surface and subsurface catching of meteoric waters resulting in the presence of sulfur-bearing gases and steam photochemistry. In this work we suggest a new scenario for the extensive generation of sulfates in Mars based on the observation of seasonal changes in the redox and pH of subsurface waters enriched in sulfur that supply the acidic Mars process analog of Rio Tinto. This model considers the long-term subsurface storage of sulfur during most of Noachian and its release from the late Noachian to Hesperian time through weathering by meteoric fluids that would acidify and oxidize the sulfur bearing compounds stored in the subsurface