An image sensor with fast extraction of objects\u27 positions - Rough vision processor

金沢大学大学院自然科学研究科情報システム金沢大学工学部An integration of the signal processing circuits with the image acquiring device, which is called the vision chip and can process information in parallel, is proposed for fast image processing. In applications for robot vision, not only the detailed information, such as shape or texture, but also the rough information, such as \u27something is around here\u27, are important and useful. We consider the detecting of centroids of objects in the focal plain as the rough vision processing, which is useful in practical application, and describe its implementation using two components; the centroid detector and the coordinate generator. First, we describe the fast flag generation algorithm indicating the centroid of objects, and its implementation using an analog parallel signal processing architecture. Next, we describe a novel encoding algorithm for flag positions indicating the centroids in order to obtain their coordinates

自然界から分離した黄麹菌(Aspergillus oryzae)と醸造用黄麹菌の比較解析

Aspergillus oryzae is widely used to produce fermented food such as sake, soy sauce and miso in Japan. Since these fungi have been used for food fermentation for a long time, these economic strains for food fermentation are thought as "domesticated strains." The origin of these strains is thought to be a contaminant from natural environment. We isolated many A. oryzae like strains from field using the autoclaved rice as medium. Isolated strains were confirmed as A. oryzae by the genomic structure of aflatoxin homologous gene cluster. The amount of mycelium in rice koji prepared by isolated strains did not show the significant differences compared with those of commercial strains. The activities of enzymes such as α-amylase, glucoamylase, acid carboxypeptidase, acid protease and neutral protease in rice kojiprepared by isolated eight strains and commercial strains were analyzed. Some of the isolated strains showed the similar enzyme activities to those of the commercial strains. From these results, it is suggested that the present commercial A. oryzae strains originate from A. oryzaeliving in the natural environment

Analysis of Expressed Sequence Tags from the Fungus Aspergillus oryzae Cultured Under Different Conditions

We performed random sequencing of cDNAs from nine biologically or industrially important cultures of the industrially valuable fungus Aspergillus oryzae to obtain expressed sequence tags (ESTs). Consequently, 21 446 raw ESTs were accumulated and subsequently assembled to 7589 non-redundant consensus sequences (contigs). Among all contigs, 5491 (72.4%) were derived from only a particular culture. These included 4735 (62.4%) singletons, i.e. lone ESTs overlapping with no others. These data showed that consideration of culture grown under various conditions as cDNA sources enabled efficient collection of ESTs. BLAST searches against the public databases showed that 2953 (38.9%) of the EST contigs showed significant similarities to deposited sequences with known functions, 793 (10.5%) were similar to hypothetical proteins, and the remaining 3843 (50.6%) showed no significant similarity to sequences in the databases. Culture-specific contigs were extracted on the basis of the EST frequency normalized by the total number for each culture condition. In addition, contig sequences were compared with sequence sets in eukaryotic orthologous groups (KOGs), and classified into the KOG functional categories

Review of swimming fully clothed program : one of our draft plans for revision of the maritime practice at the Tokyo University of Fisheries III

東京水産大学 食品生産学科東京水産大学 海洋生産学科東京水産大学 海洋生産学科東京水産大学 海洋生産学科東京水産大学 研究練習船東京水産大学 海洋環境学科東京水産大学 資源管理学科東京水産大学 資源育成学

Application of swimming fully clothed to novices : one of our draft plans for revision of the maritime practice at the Tokyo University of Fisheries - II

東京水産大学食品生産学科東京水産大学海洋生産学科東京水産大学海洋生産学科東京水産大学海洋生産学科東京水産大学研究練習船東京水産大学海洋環境学科東京水産大学資源管理学科東京水産大学資源育成学

Light-induced structural changes and the site of O=O bond formation in PSII caught by XFEL

Photosystem II (PSII) is a huge membrane-protein complex consisting of 20 different subunits with a total molecular mass of 350 kDa for a monomer. It catalyses light-driven water oxidation at its catalytic centre, the oxygen-evolving complex (OEC). The structure of PSII has been analysed at 1.9 Å resolution by synchrotron radiation X-rays, which revealed that the OEC is a Mn4CaO5 cluster organized in an asymmetric, 'distorted-chair' form. This structure was further analysed with femtosecond X-ray free electron lasers (XFEL), providing the 'radiation damage-free' structure. The mechanism of O=O bond formation, however, remains obscure owing to the lack of intermediate-state structures. Here we describe the structural changes in PSII induced by two-flash illumination at room temperature at a resolution of 2.35 Å using time-resolved serial femtosecond crystallography with an XFEL provided by the SPring-8 ångström compact free-electron laser. An isomorphous difference Fourier map between the two-flash and dark-adapted states revealed two areas of apparent changes: around the QB/non-haem iron and the Mn4CaO5 cluster. The changes around the QB/non-haem iron region reflected the electron and proton transfers induced by the two-flash illumination. In the region around the OEC, a water molecule located 3.5 Å from the Mn4CaO5 cluster disappeared from the map upon two-flash illumination. This reduced the distance between another water molecule and the oxygen atom O4, suggesting that proton transfer also occurred. Importantly, the two-flash-minus-dark isomorphous difference Fourier map showed an apparent positive peak around O5, a unique μ4-oxo-bridge located in the quasi-centre of Mn1 and Mn4 (refs 4,5). This suggests the insertion of a new oxygen atom (O6) close to O5, providing an O=O distance of 1.5 Å between these two oxygen atoms. This provides a mechanism for the O=O bond formation consistent with that proposed previousl

Proteomic Analysis of Extracellular Proteins from Aspergillus oryzae Grown under Submerged and Solid-State Culture Conditions

Filamentous fungi are widely used for the production of homologous and heterologous proteins. Recently, there has been increasing interest in Aspergillus oryzae because of its ability to produce heterologous proteins in solid-state culture. To provide an overview of protein secretion by A. oryzae in solid-state culture, we carried out a comparative proteome analysis of extracellular proteins in solid-state and submerged (liquid) cultures. Extracellular proteins prepared from both cultures sequentially from 0 to 40 h were subjected to two-dimensional electrophoresis, and protein spots at 40 h were identified by peptide mass fingerprinting using matrix-assisted laser desorption ionization-time-of-flight mass spectrometry. We also attempted to identify cell wall-bound proteins of the submerged culture. We analyzed 85 spots from the solid-state culture and 110 spots from the submerged culture. We identified a total of 29 proteins, which were classified into 4 groups. Group 1 consisted of extracellular proteins specifically produced in the solid-state growth condition, such as glucoamylase B and alanyl dipeptidyl peptidase. Group 2 consisted of extracellular proteins specifically produced in the submerged condition, such as glucoamylase A (GlaA) and xylanase G2 (XynG2). Group 3 consisted of proteins produced in both conditions, such as xylanase G1. Group 4 consisted of proteins that were secreted to the medium in the solid-state growth condition but trapped in the cell wall in the submerged condition, such as α-amylase (TAA) and β-glucosidase (Bgl). A Northern analysis of seven genes from the four groups suggested that the secretion of TAA and Bgl was regulated by trapping these proteins in the cell wall in submerged culture and that secretion of GlaA and XynG2 was regulated at the posttranscriptional level in the solid-state culture