27 research outputs found

    Identification of the first bacteriocin isolated in Lebanon extracted via a modified adsorption-desorption method and its potential food application

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    Introduction: The raw goat milk is considered as a good source of novel bacteriocinogenic lactic acid bacteria (LAB) strains. Method: The bacteriocin, which named enterocin CMUL20-2 was secreted by Enterococcus faecium CMUL20-2. This bacterial strain was originally isolated from raw goatñ€ℱs milk, was extracted by using a modified adsorption-desorption method and purified via RP-HPLC. antimicrobial activity was tested against several pathogenic and spoilage microbes. Results: The enterocin CMUL20-2 showed a strong adsorption on cell wall of producer strain even in acidic environment which facilitate its extraction in only two simple steps. The recovered purified enterocin has decreased procedure time and diminished the number of undesirable molecules present in Rogosa and Sharpe (MRS) broth. The recovered enterocin showed antimicrobial activity against several foodborne pathogenic and spoilage microbes. Conclusion:  The recovered enterocin was able to tolerate a variety of food chain conditions such as high temperature, pH and storage stability, and it can be a good candidate to protect food from spoilage microbes &nbsp

    Mortality from gastrointestinal congenital anomalies at 264 hospitals in 74 low-income, middle-income, and high-income countries: a multicentre, international, prospective cohort study

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    Background: Congenital anomalies are the fifth leading cause of mortality in children younger than 5 years globally. Many gastrointestinal congenital anomalies are fatal without timely access to neonatal surgical care, but few studies have been done on these conditions in low-income and middle-income countries (LMICs). We compared outcomes of the seven most common gastrointestinal congenital anomalies in low-income, middle-income, and high-income countries globally, and identified factors associated with mortality. // Methods: We did a multicentre, international prospective cohort study of patients younger than 16 years, presenting to hospital for the first time with oesophageal atresia, congenital diaphragmatic hernia, intestinal atresia, gastroschisis, exomphalos, anorectal malformation, and Hirschsprung's disease. Recruitment was of consecutive patients for a minimum of 1 month between October, 2018, and April, 2019. We collected data on patient demographics, clinical status, interventions, and outcomes using the REDCap platform. Patients were followed up for 30 days after primary intervention, or 30 days after admission if they did not receive an intervention. The primary outcome was all-cause, in-hospital mortality for all conditions combined and each condition individually, stratified by country income status. We did a complete case analysis. // Findings: We included 3849 patients with 3975 study conditions (560 with oesophageal atresia, 448 with congenital diaphragmatic hernia, 681 with intestinal atresia, 453 with gastroschisis, 325 with exomphalos, 991 with anorectal malformation, and 517 with Hirschsprung's disease) from 264 hospitals (89 in high-income countries, 166 in middle-income countries, and nine in low-income countries) in 74 countries. Of the 3849 patients, 2231 (58·0%) were male. Median gestational age at birth was 38 weeks (IQR 36–39) and median bodyweight at presentation was 2·8 kg (2·3–3·3). Mortality among all patients was 37 (39·8%) of 93 in low-income countries, 583 (20·4%) of 2860 in middle-income countries, and 50 (5·6%) of 896 in high-income countries (p<0·0001 between all country income groups). Gastroschisis had the greatest difference in mortality between country income strata (nine [90·0%] of ten in low-income countries, 97 [31·9%] of 304 in middle-income countries, and two [1·4%] of 139 in high-income countries; p≀0·0001 between all country income groups). Factors significantly associated with higher mortality for all patients combined included country income status (low-income vs high-income countries, risk ratio 2·78 [95% CI 1·88–4·11], p<0·0001; middle-income vs high-income countries, 2·11 [1·59–2·79], p<0·0001), sepsis at presentation (1·20 [1·04–1·40], p=0·016), higher American Society of Anesthesiologists (ASA) score at primary intervention (ASA 4–5 vs ASA 1–2, 1·82 [1·40–2·35], p<0·0001; ASA 3 vs ASA 1–2, 1·58, [1·30–1·92], p<0·0001]), surgical safety checklist not used (1·39 [1·02–1·90], p=0·035), and ventilation or parenteral nutrition unavailable when needed (ventilation 1·96, [1·41–2·71], p=0·0001; parenteral nutrition 1·35, [1·05–1·74], p=0·018). Administration of parenteral nutrition (0·61, [0·47–0·79], p=0·0002) and use of a peripherally inserted central catheter (0·65 [0·50–0·86], p=0·0024) or percutaneous central line (0·69 [0·48–1·00], p=0·049) were associated with lower mortality. // Interpretation: Unacceptable differences in mortality exist for gastrointestinal congenital anomalies between low-income, middle-income, and high-income countries. Improving access to quality neonatal surgical care in LMICs will be vital to achieve Sustainable Development Goal 3.2 of ending preventable deaths in neonates and children younger than 5 years by 2030

    Mortality from gastrointestinal congenital anomalies at 264 hospitals in 74 low-income, middle-income, and high-income countries: a multicentre, international, prospective cohort study

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    Summary Background Congenital anomalies are the fifth leading cause of mortality in children younger than 5 years globally. Many gastrointestinal congenital anomalies are fatal without timely access to neonatal surgical care, but few studies have been done on these conditions in low-income and middle-income countries (LMICs). We compared outcomes of the seven most common gastrointestinal congenital anomalies in low-income, middle-income, and high-income countries globally, and identified factors associated with mortality. Methods We did a multicentre, international prospective cohort study of patients younger than 16 years, presenting to hospital for the first time with oesophageal atresia, congenital diaphragmatic hernia, intestinal atresia, gastroschisis, exomphalos, anorectal malformation, and Hirschsprung’s disease. Recruitment was of consecutive patients for a minimum of 1 month between October, 2018, and April, 2019. We collected data on patient demographics, clinical status, interventions, and outcomes using the REDCap platform. Patients were followed up for 30 days after primary intervention, or 30 days after admission if they did not receive an intervention. The primary outcome was all-cause, in-hospital mortality for all conditions combined and each condition individually, stratified by country income status. We did a complete case analysis. Findings We included 3849 patients with 3975 study conditions (560 with oesophageal atresia, 448 with congenital diaphragmatic hernia, 681 with intestinal atresia, 453 with gastroschisis, 325 with exomphalos, 991 with anorectal malformation, and 517 with Hirschsprung’s disease) from 264 hospitals (89 in high-income countries, 166 in middleincome countries, and nine in low-income countries) in 74 countries. Of the 3849 patients, 2231 (58·0%) were male. Median gestational age at birth was 38 weeks (IQR 36–39) and median bodyweight at presentation was 2·8 kg (2·3–3·3). Mortality among all patients was 37 (39·8%) of 93 in low-income countries, 583 (20·4%) of 2860 in middle-income countries, and 50 (5·6%) of 896 in high-income countries (p<0·0001 between all country income groups). Gastroschisis had the greatest difference in mortality between country income strata (nine [90·0%] of ten in lowincome countries, 97 [31·9%] of 304 in middle-income countries, and two [1·4%] of 139 in high-income countries; p≀0·0001 between all country income groups). Factors significantly associated with higher mortality for all patients combined included country income status (low-income vs high-income countries, risk ratio 2·78 [95% CI 1·88–4·11], p<0·0001; middle-income vs high-income countries, 2·11 [1·59–2·79], p<0·0001), sepsis at presentation (1·20 [1·04–1·40], p=0·016), higher American Society of Anesthesiologists (ASA) score at primary intervention (ASA 4–5 vs ASA 1–2, 1·82 [1·40–2·35], p<0·0001; ASA 3 vs ASA 1–2, 1·58, [1·30–1·92], p<0·0001]), surgical safety checklist not used (1·39 [1·02–1·90], p=0·035), and ventilation or parenteral nutrition unavailable when needed (ventilation 1·96, [1·41–2·71], p=0·0001; parenteral nutrition 1·35, [1·05–1·74], p=0·018). Administration of parenteral nutrition (0·61, [0·47–0·79], p=0·0002) and use of a peripherally inserted central catheter (0·65 [0·50–0·86], p=0·0024) or percutaneous central line (0·69 [0·48–1·00], p=0·049) were associated with lower mortality. Interpretation Unacceptable differences in mortality exist for gastrointestinal congenital anomalies between lowincome, middle-income, and high-income countries. Improving access to quality neonatal surgical care in LMICs will be vital to achieve Sustainable Development Goal 3.2 of ending preventable deaths in neonates and children younger than 5 years by 2030

    Global, regional, and national burden of disorders affecting the nervous system, 1990–2021: a systematic analysis for the Global Burden of Disease Study 2021

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    BackgroundDisorders affecting the nervous system are diverse and include neurodevelopmental disorders, late-life neurodegeneration, and newly emergent conditions, such as cognitive impairment following COVID-19. Previous publications from the Global Burden of Disease, Injuries, and Risk Factor Study estimated the burden of 15 neurological conditions in 2015 and 2016, but these analyses did not include neurodevelopmental disorders, as defined by the International Classification of Diseases (ICD)-11, or a subset of cases of congenital, neonatal, and infectious conditions that cause neurological damage. Here, we estimate nervous system health loss caused by 37 unique conditions and their associated risk factors globally, regionally, and nationally from 1990 to 2021.MethodsWe estimated mortality, prevalence, years lived with disability (YLDs), years of life lost (YLLs), and disability-adjusted life-years (DALYs), with corresponding 95% uncertainty intervals (UIs), by age and sex in 204 countries and territories, from 1990 to 2021. We included morbidity and deaths due to neurological conditions, for which health loss is directly due to damage to the CNS or peripheral nervous system. We also isolated neurological health loss from conditions for which nervous system morbidity is a consequence, but not the primary feature, including a subset of congenital conditions (ie, chromosomal anomalies and congenital birth defects), neonatal conditions (ie, jaundice, preterm birth, and sepsis), infectious diseases (ie, COVID-19, cystic echinococcosis, malaria, syphilis, and Zika virus disease), and diabetic neuropathy. By conducting a sequela-level analysis of the health outcomes for these conditions, only cases where nervous system damage occurred were included, and YLDs were recalculated to isolate the non-fatal burden directly attributable to nervous system health loss. A comorbidity correction was used to calculate total prevalence of all conditions that affect the nervous system combined.FindingsGlobally, the 37 conditions affecting the nervous system were collectively ranked as the leading group cause of DALYs in 2021 (443 million, 95% UI 378–521), affecting 3·40 billion (3·20–3·62) individuals (43·1%, 40·5–45·9 of the global population); global DALY counts attributed to these conditions increased by 18·2% (8·7–26·7) between 1990 and 2021. Age-standardised rates of deaths per 100 000 people attributed to these conditions decreased from 1990 to 2021 by 33·6% (27·6–38·8), and age-standardised rates of DALYs attributed to these conditions decreased by 27·0% (21·5–32·4). Age-standardised prevalence was almost stable, with a change of 1·5% (0·7–2·4). The ten conditions with the highest age-standardised DALYs in 2021 were stroke, neonatal encephalopathy, migraine, Alzheimer's disease and other dementias, diabetic neuropathy, meningitis, epilepsy, neurological complications due to preterm birth, autism spectrum disorder, and nervous system cancer.InterpretationAs the leading cause of overall disease burden in the world, with increasing global DALY counts, effective prevention, treatment, and rehabilitation strategies for disorders affecting the nervous system are needed

    Study of the antimicrobial and antioxidant activity of essential oil extracted from Lebanese plants

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    La rĂ©sistance aux antibiotiques est devenue une vĂ©ritable prĂ©occupation. Ainsi, la recherche de composĂ©s antimicrobiens est plus que jamais d’actualitĂ©. Les plantes constituent une source potentielle de ces composĂ©s. La thĂšse prĂ©sente une Ă©tude dĂ©taillĂ©e de la composition chimique et dĂ©crit l’activitĂ© antimicrobienne d’huiles essentielles issues de trois plantes : Micromeria barbata, Eucalyptus spp. et Juniperus excelsa. L’influence de plusieurs paramĂštres tels que le type d’organe, l’altitude de croissance de la plante, la durĂ©e de l’extraction, la mĂ©thode de sĂ©chage sur la qualitĂ© et l’activitĂ© de l’huile est abordĂ©e. Les rĂ©sultats montrent, dans le cas de M. barbata non fleurie, que le pourcentage maximal (99.54 %) de l’huile est obtenu Ă  la plus haute altitude (1700 m). Cependant, le pourcentage du Pulgeone, le composĂ© principal de l’huile essentielle, diminue graduellement lorsque l’altitude augmente. Par ailleurs, l’activitĂ© des huiles essentielles extraites des plantes aux trois diffĂ©rentes altitudes est Ă©quivalente pour les diffĂ©rentes souches testĂ©es.L’activitĂ© antibactĂ©rienne et antifongique de l’huile essentielle de M. barbata est Ă©galement mise en Ă©vidence contre diffĂ©rentes espĂšces bactĂ©riennes, y compris celles qui rĂ©sistent aux carbapĂ©nĂšmes, pour les champignons opportunistes et les dermatophytes L’activitĂ© antimicrobienne de ces trois huiles essentielles est Ă©valuĂ©e vis-Ă -vis de deux souches de Mycobacterium tuberculosis (dont une XDR), deux espĂšces atypiques : Mycobacterium kansasii et Mycobacterium gordonae ainsi que sur Paenibacillus larvae. Les rĂ©sultats montrent que les trois huiles possĂšdent une activitĂ© notoire.Antibiotic resistance has become a real concern. Thus, the research of antimicrobial compounds is more relevant than ever. The aromatic plants are a potential source of these compounds. The thesis presents an advanced study of the chemical composition and describes the antimicrobial activity of essential oils from three plants: Micromeria barbata (M.barbata), Eucalyptus spp. and Juniperus excelsa (J.excelca). The influence of several parameters such as organ type, elevation of plant growth,duration of extraction, and drying method has been discussed .The results reveal that non – flowering of M..barbata has the maximum percentage (99.54%) of the oil is collected at the altitude (1700 m). However, the percentage of Pulgeone, the main component of the essential oil gradually decreases with increasing altitude. Furthermore, the activity of essential oils extracted from plants in three different altitudes is similar for the different microbial strains tested.The essential antibacterial and antifungal oil M. barbata is also highlighted against different bacterial species, including those resistant to carbapenems, for opportunistic fungi and dermatophytesThe antimicrobial activity of three essential oils is evaluated against two strains of Mycobacterium tuberculosis (including XDR), two atypical species: Mycobacterium kansasii and Mycobacterium gordonae well as Paenibacillus larvae ,the causative agent of American foulbrood disease that infect the honey bees larvae . Results show that three oils have a significant anti-mycobacterial activity

    Comparison of the efficacy of two insecticides for the management of Dactylopius opuntiae on prickly pear cactus in Lebanon and monitoring of the insecticides residues dissipation rates in fruits and cladodes

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    International audienceEnvironmental conditions and availability of new cultivated areas of prickly pear cactus in Lebanon appeared lately to be favourable for the survival and development of D. opuntiae which has become highly noxious. To thwart use of random chemicals and broad spectrum pesticides by local farmers, efficacy of sulfoxaflor (Closerℱ 240 SC, rate 0.179 kg a.i/ha) and diflubenzuron (DimilinÂź 25 W, rate 0.329 kg a.i/ha) was compared. Individual insecticidal solutions of each applied alone or in mixing with mineral oil (spray oil 7E, rate 1.010 kg a.i/ha) on potted cladodes in laboratory conditions (T = 23 ± 4 °C, RH = 58–63%) showed a sharp decrease in the number of individuals within colonies 48 h after treatment especially among first- and second-instar larvae. Similarly, the same insecticidal solutions applied on separate plots in field condi-tions (T = 20–35 °C, RH = 55–75%) according to the Good Agricultural Practices showed efficacious control of the pest development. D. opuntiae mortality mean percentage reached 80% and 72%, respectively, for sulfoxaflor and diflubenzu-ron 96 h after treatment. The added mineral oil acted as a synergist and enhanced efficacy of both insecticides. Mortality mean percentages increased to 92% and 88%, respectively. Insecticides residues content over time in fruits and cladodes were afterwards monitored. Samples were harvested at 3 days interval and residues extracted by the QuEChERS method and quantified by LC–MS. Dissipation rates after 30 days of treatment attained 70.8% and 80.6% in fruits and 98.5% and 74.0% in cladodes, respectively, for sulfoxaflor and diflubenzuron. Half-life time varied accordingly and was higher for fruits treated with sulfoxaflor (14.20 days) than for those treated with diflubenzuron (11.18 days). On contrary, for clad-odes, half-life time of the former (4.18 days) was lower than that of the latter (15.47 days). The addition of mineral oil into the spray solution of the insecticides increased their persistency in the crop. Consequently, half-life times increased and dissipation rates decreased. Findings of this study should enlarge the spectrum of chemical means for D. opuntiae management and promote resilience of the crop. Analytical method applied for residues analysis should be useful for registration of the insecticides on the crop and MRLs setting

    PRÉVALENCE DE LISTERIA MONOCYTOGENES DANS LE LAIT CRU DE VACHE AU LIBAN NORD

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    Al Kassaa Imad, Khaled el Omari, Marwa Saati, Bachar Ismail and Monzer Hamze. 2016. Prevalence of Listeria monocytogenes in raw cow milk in north Lebanon. Lebanese Science Journal, 17(1): 39-45. Listeriosis, although a zoonosis, is an invasive disease that can affect newborns, pregnant women and immunocompromised adults. Clinical manifestations can be expressed by febrile gastroenteritis, invasive forms including severe sepsis, meningitis, rhombencephalitis, prenatal infections and abortions. Species of Listeria bacteria are ubiquitous and adaptable to the environment in animal and plant foods. This study aimed to determine the prevalence of Listeria monocytogenes in 100 samples of fresh cow milk collected from different areas of North Lebanon. Listeria monocytogenes was detected by using the Grand VIDAS technique (Biomérieux France). The results obtained revealed the absence of Listeria monocytogenes in all analyzed samples

    In-vitro evaluation of the antibacterial activity of the essential oils of Micromeria barbata, Eucalyptus globulus and Juniperus excelsa against strains of Mycobacterium tuberculosis (including MDR), Mycobacterium kansasii and Mycobacterium gordonae

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    Background: Mycobacterium spp. are responsible for several diseases, particularly in immunocompromised populations. The spreading of the resistance to antimycobacterial drugs is a significant problem to the public health and requires to find out a new and innovative alternative for the treatment of drug resistant mycobacterial strains. In this study, the antimycobacterial activity of Micromeria barbata, Eucalyptus globulus and Juniperus excelsa essential oils extracted from Lebanese plants was investigated against selected Mycobacterium spp. strains. Methods: Several dilutions of the three aforementioned essential oils were studied for antimycobacterial activity against four Mycobacterium spp. strains: Mycobacterium tuberculosis subsp. tuberculosis (ATCC (R) 27294 (TM)), multidrug-resistant M. tuberculosis (CMUL 157), Mycobacterium kansasii Hauduroy (ATCC (R) 12478 (TM)) and Mycobacterium gordonae Bojalil et al. (ATCC (R) 14470 (TM)). Results: Even with high dilutions, all tested essential oils showed a high antimycobacterial activity against targeted strains. Our data showed that M. barbata, E. globulus and J. excelsa essential oils totally inhibit the mycobacterial growth whatever the tested strains for the dilution 1/250, 1/100 and 1/250, respectively. Conclusion: To our knowledge, this is the first study regarding the antimycobacterial activity of essential oils in Lebanon. Our data show promising results, and encourage to investigate more on these medicinal plants, especially M. barbata

    Pepsin and Trypsin Treatment Combined with Carvacrol: An Efficient Strategy to Fight <i>Pseudomonas aeruginosa</i> and <i>Enterococcus faecalis</i> Biofilms

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    Biofilms consist of microbial communities enclosed in a self-produced extracellular matrix which is mainly responsible of biofilm virulence. Targeting this matrix could be an effective strategy to control biofilms. In this work, we examined the efficacy of two proteolytic enzymes, pepsin and trypsin, to degrade P. aeruginosa and E. faecalis biofilms and their synergistic effect when combined with carvacrol. The minimum dispersive concentrations (MDCs) and the contact times of enzymes, as well as the minimal inhibitory concentrations (MICs) and contact times of carvacrol, were determined against biofilms grown on polystyrene surfaces. For biofilms grown on stainless steel surfaces, the combined pepsin or trypsin with carvacrol treatment showed more significant reduction of both biofilms compared with carvacrol treatment alone. This reduction was more substantial after sequential treatment of both enzymes, followed by carvacrol with the greatest reduction of 4.7 log CFU mL−1 (p P. aeruginosa biofilm and 3.3 log CFU mL−1 (p E. faecalis biofilm. Such improved efficiency was also obvious in the epifluorescence microscopy analysis. These findings demonstrate that the combined effect of the protease-dispersing activity and the carvacrol antimicrobial activity could be a prospective approach for controlling P. aeruginosa and E. faecalis biofilms
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