Computational Essays in the Physics Classroom

Writing and argumentation are critical to both professional physics and physics education. However, the skill of making an extended argument in writing is often overlooked in physics classrooms, apart from certain practices like lab notebooks or mathematical proofs. Computation is also critical to both professional physics and, increasingly, physics education. In recent years we have begun to develop a class of assignment, known as a computational essay, to both leverage the creative affordances of computation and help students build their argumentative writing skills. Computational essays are a type of essay or report that combine text and code to express an idea or make an argument, usually written in notebook software. In this article, we describe the motivation and philosophy behind computational essays, as well as initial results from a pilot implementation in an introductory undergraduate electricity and magnetism course.Comment: Published in The Physics Teacher: https://aapt.scitation.org/doi/10.1119/1.514547

The range of the mange: Spatiotemporal patterns of sarcoptic mange in red foxes (Vulpes vulpes) as revealed by camera trapping

Sarcoptic mange is a widely distributed disease that affects numerous mammalian species. We used camera traps to investigate the apparent prevalence and spatiotemporal dynamics of sarcoptic mange in a red fox population in southeastern Norway. We monitored red foxes for five years using 305 camera traps distributed across an 18000 km2 area. A total of 6581 fox events were examined to visually identify mange compatible lesions. We investigated factors associated with the occurrence of mange by using logistic models within a Bayesian framework, whereas the spatiotemporal dynamics of the disease were analysed with spacetime scan statistics. The apparent prevalence of the disease fluctuated over the study period with a mean of 3.15% and credible interval [1.25, 6.37], and our best logistic model explaining the presence of red foxes with mange-compatible lesions included time since the beginning of the study and the interaction between distance to settlement and season as explanatory variables. The scan analyses detected several potential clusters of the disease that varied in persistence and size, and the locations in the cluster with the highest probability were closer to human settlements than the other survey locations. Our results indicate that red foxes in an advanced stage of the disease are most likely found closer to human settlements during periods of low wild prey availability (winter). We discuss different potential causes. Furthermore, the disease appears to follow a pattern of small localized outbreaks rather than sporadic isolated events.publishedVersio

Smartphone app reveals that lynx avoid human recreationists on local scale, but not home range scale

Outdoor recreation is increasing and affects habitat use and selection by wildlife. These effects are challenging to study, especially for elusive species with large spatial requirements, as it is hard to obtain reliable proxies of recreational intensity over extensive areas. Commonly used proxies, such as the density of, or distance to, hiking paths, ignore outdoor recreation occurring on other linear feature types. Here we utilized crowdsourced data from the Strava training app to obtain a large-scale proxy for pedestrian outdoor recreation intensity in southeast Norway. We used the proxy and GPS-tracking data from collared Eurasian lynx (Lynx lynx) to investigate how recreation affects habitat selection at the home range scale and local scale by lynx during summer. We fitted resource selection functions at the two scales using conditional logistic regression. Our analysis revealed that lynx avoided areas of recreational activity at the local scale, but not at home range scale. Nonetheless, lynx frequently used areas associated with recreation, and to a greater degree at night than during the day. Our results suggest that local-scale avoidance of recreation and temporal adjustments of habitat use by lynx mitigate the need for a home range-scale response towards recreation. Scale-dependent responses and temporal adjustments in habitat use may facilitate coexistence between humans and large carnivores

Altitude, latitude, and climate zone as determinants of mountain hare (Lepus timidus) coat colour change

publishedVersio

Smartphone app reveals that lynx avoid human recreationists on local scale, but not home range scale

The global incrOutdoor recreation is increasing and afects habitat use and selection by wildlife. These efects are challenging to study, especially for elusive species with large spatial requirements, as it is hard to obtain reliable proxies of recreational intensity over extensive areas. Commonly used proxies, such as the density of, or distance to, hiking paths, ignore outdoor recreation occurring on other linear feature types. Here we utilized crowdsourced data from the Strava training app to obtain a large-scale proxy for pedestrian outdoor recreation intensity in southeast Norway. We used the proxy and GPS-tracking data from collared Eurasian lynx (Lynx lynx) to investigate how recreation afects habitat selection at the home range scale and local scale by lynx during summer. We ftted resource selection functions at the two scales using conditional logistic regression. Our analysis revealed that lynx avoided areas of recreational activity at the local scale, but not at home range scale. Nonetheless, lynx frequently used areas associated with recreation, and to a greater degree at night than during the day. Our results suggest that local-scale avoidance of recreation and temporal adjustments of habitat use by lynx mitigate the need for a home range-scale response towards recreation. Scale-dependent responses and temporal adjustments in habitat use may facilitate coexistence between humans and large carnivorespublishedVersio

Selectivity of eurasian lynx Lynx lynx and recreational hunters for age, sex and body condition in roe deer Capreolus capreolus

tional hunters for age, sex and condition in roe deerCapreolus capreolus.-Wildl. Biol. 13: 467-474. Data on the age, sex and condition of roe deer Capreolus capreolus killed by Eurasian lynx Lynx lynx and human hunters were collected in two study areas in the counties of Nord-Trøndelag and Hedmark in central and southeastern Norway, respectively. Data on the age and sex structure of the standing population were also collected. No differences in the age or sex structure of roe deer killed by lynx were found between the two study areas or between years with differing snow depths which was ex-pected to affect age-class vulnerability. The profile of 151 lynx-killed roe deer (24 % adult males, 44 % adult females, 11 % male fawns and 21% female fawns) was not statistically different from that of the standing population. In contrast, hunters killed a significantly larger proportion of adult animals, especially males (44 % adult males, 28 % adult females, 15 % male fawns and 13 % female fawns). The detailed age structure of lynx killed and hunter killed animals was not different within the adult age class. The body condition of roe deer declined during late winter (more so for males than for females), however, there was no difference in the con-dition of roe deer killed by lynx or hunters during early winter (the hunt-ing season ends on 24 December). The overall picture is typical of a stalk-ing predator that has few options to select individuals based on condition, age or sex in a prey species with no sexual dimorphism and which is relatively small in relation to the size of the predator (lynx are 50-70% the size of an adult roe deer). Human hunters, on the other hand, are clearly harvesting a non-random section of the population. The result is that hunting does not replicate natural predation, although lynx preda-tion is likely to have a higher per capita impact on roe deer growth rates

Altitude, latitude and climate zone as determinants of mountain hare (Lepus timidus) coat colour change

Local adaptation to annually changing environments has evolved in numerous species. Seasonal coat colour change is an adaptation that has evolved in multiple mammal and bird species occupying areas that experience seasonal snow cover. It has a critical impact on fitness as predation risk may increase when an individual is mismatched against its habitat's background colour. In this paper, we investigate the correlation between landscape covariates and moult timing in a native winter-adapted herbivore, the mountain hare (Lepus timidus), throughout Norway. Data was collected between 2011 and 2019 at 678 camera trap locations deployed across an environmental gradient. Based on this data, we created a Bayesian multinomial logistic regression model that quantified the correlations between landscape covariates and coat colour phenology and analysed among season and year moult timing variation. Our results demonstrate that mountain hare moult timing is strongly correlated with altitude and latitude with hares that live at higher latitudes and altitudes keeping their winter white coats for longer than their conspecifics that inhabit lower latitudes and altitudes. Moult timing was also weakly correlated with climate zone with hares that live in coastal climates keeping their winter white coats for longer than hares that live in continental climates. We found evidence of some among year moult timing variation in spring, but not in autumn. We conclude that mountain hare moult timing has adapted to local environmental conditions throughout Norway

Forestry and environmental conditions as determinants of pine marten Martes martes occurrence in Norway

The European pine marten Martes martes is often associated with late seral stage coniferous forest stands. Earlier research has indicated that this species may be negatively influenced by clearcutting practices. However, the effects of current clearcutting methods on pine marten occurrence in conjunction with changing environmental conditions are not well known. In this study, we combined four complete years of nationwide data collected during a long-term camera trap (CT) monitoring program in Norway. We employed a multi-scale occupancy model to investigate the relationship of pine marten occurrence to clearcuts (regenerating stands & LE; 10 years old) and forests & GE; 120 years old. We also examined pine marten detection in relation to habitat features (i.e. dominant microsite characteristics) and to varying snow depths and temperatures. We found no relationship between pine marten occurrence and the proportions of old forest and clearcuts at the landscape scale. At the habitat-patch scale, pine marten occurrence was positively associated with the presence of old forest patches and terrain ruggedness, but not with clearcuts & LE; 100 m from sites. At CT sites near clearcuts, the detection probability was negatively correlated with snow depth. In contrast, pine marten occurrence was positively associated with snow depth at CT sites > 100 m from clearcuts. Furthermore, the detection probability increased with temperature and the presence of boulders at CT sites. Boulders may provide important access points for foraging, and cover for resting and predator avoidance. While previous studies indicate that pine martens prefer older forest and avoid clearcuts, the current level and scale of clearcutting in Norway does not appear to influence its occurrence at the landscape scale

Forestry and environmental conditions as determinants of pine marten Martes martes occurrence in Norway

The European pine marten Martes martes is often associated with late seral stage coniferous forest stands. Earlier research has indicated that this species may be nega tively influenced by clearcutting practices. However, the effects of current clearcutting methods on pine marten occurrence in conjunction with changing environmental conditions are not well known. In this study, we combined four complete years of nationwide data collected during a long-term camera trap (CT) monitoring program in Norway. We employed a multi-scale occupancy model to investigate the relationship of pine marten occurrence to clearcuts (regenerating stands ≤ 10 years old) and forests ≥ 120 years old. We also examined pine marten detection in relation to habitat features (i.e. dominant microsite characteristics) and to varying snow depths and temperatures. We found no relationship between pine marten occurrence and the proportions of old forest and clearcuts at the landscape scale. At the habitat-patch scale, pine marten occurrence was positively associated with the presence of old forest patches and terrain ruggedness, but not with clearcuts ≤ 100 m from sites. At CT sites near clearcuts, the detection probability was negatively correlated with snow depth. In contrast, pine marten occurrence was positively associated with snow depth at CT sites > 100 m from clearcuts. Furthermore, the detection probability increased with temperature and the presence of boulders at CT sites. Boulders may provide impor tant access points for foraging, and cover for resting and predator avoidance. While previous studies indicate that pine martens prefer older forest and avoid clearcuts, the current level and scale of clearcutting in Norway does not appear to influence its occurrence at the landscape scale.publishedVersio

Quantifying the checks and balances of collaborative governance systems for adaptive carnivore management

Recovering or threatened carnivore populations are often harvested to minimise their impact on human activities, such as livestock farming or game hunting. Increasingly, harvest quota decisions involve a set of scientific, administrative and political institutions operating at national and sub-national levels whose interactions and collective decision-making aim to increase the legitimacy of management and ensure population targets are met. In practice, however, assessments of how quota decisions change between these different actors and what consequences these changes have on population trends are rare. We combine a state-space population modelling approach with an analysis of quota decisions taken at both regional and national levels between 2007 and 2018 to build a set of decision-making models that together predict annual harvest quota values for Eurasian lynx (Lynx lynx) in Norway. We reveal a tendency for administrative decision-makers to compensate for consistent quota increases by political actors, particularly when the lynx population size estimate is above the regional target. Using population forecasts based on the ensemble of decision-making models, we show that such buffering of political biases ensures lynx population size remains close to regional and national targets in the long term. Our results go beyond the usual qualitative assessment of collaborative governance systems for carnivore management, revealing a system of checks and balances that, in the case of lynx in Norway, ensures both multi-stakeholder participation and sustainable harvest quotas. Nevertheless, we highlight important inter-regional differences in decision-making and population forecasts, the socio-ecological drivers of which need to be better understood to prevent future population declines. Synthesis and applications. Our work analyses the sequence of decisions leading to yearly quotas for lynx harvest in Norway, highlighting the collaborative and structural processes that together shape harvest sustainability. In doing so, we provide a predictive framework to evaluate participatory decision-making processes in wildlife management, paving the way for scientists and decision-makers to collaborate more widely in identifying where decision biases might lie and how institutional arrangements can be optimised to minimise them. We emphasise, however, that this is only possible if wildlife management decisions are documented and transparent