Wandering throughout South America: Taxonomic revision of Tradescantia subg. Austrotradescantia (D.R.Hunt) M.Pell. (Commelinaceae)

I present the first taxonomic revision for T. subg. Austrotradescantia, based on extensive field, cultivation and herbaria studies. I accept 13 species, three of them (i.e. T. atlantica, T. hertweckii and T. tucumanensis) being described as new in the present study. I provide an identification key to the species, distribution maps, descriptions, comments, conservation assessments and illustrations for all species. The troublesome weed T. fluminensis has its specific limits clarified and its native range is presented so it can serve as a basis to better understanding its ecological requirements and to help control it throughout its invasive range. Furthermore, I highlight that T. mundula, a commonly neglected species closely related to T. fluminensis, might also represent a troublesome weed. Tradescantia mundula has been widely introduced in cultivation under the name T. albiflora and seems to have also escaped from cultivation. However, due to the hitherto poorly understood specific limits of T. fluminensis, T. mundula has been treated as a mere cultivar of T. fluminensis s.s

Molecular phylogeny and character-mapping support the synonymy of Cordobia and Gallardoa in Mionandra (Malpighiaceae)

Background and aims – Cordobia, Gallardoa, Mionandra, and Peixotoa (Stigmaphylloid clade, Malpighiaceae) are four small, closely related genera comprising shrubs or lianas endemic to South American savannas, dry forests, and temperate steppes. Their generic limits have significantly changed in the last century, and past molecular phylogenetic studies of Malpighiaceae have not tested the morphological characters of this group to identify synapomorphies supporting these clades/genera. Material and methods – We sampled the monospecific Cordobia and Gallardoa, one species of Mionandra (out of 2 spp.), nine species of Peixotoa (out of 29 spp.), and a single species of Camarea and Janusia as outgroups. Bayesian and Maximum Likelihood analyses were carried out for this clade based on five molecular markers (i.e. ETS, ITS, PHYC, matK, and ndhF). A set of 16 macromorphological characters was scored and coded for identifying synapomorphies under the Maximum Likelihood criteria. Key results – Our molecular phylogeny recovered Peixotoa as monophyletic and sister to the clade comprising Cordobia + Gallardoa + Mionandra, strongly corroborating previous phylogenetic studies of Malpighiaceae. The character-mapping analyses recovered two synapomorphies supporting the Cordobia + Gallardoa + Mionandra + Peixotoa clade, six supporting Mionandra s.l. (i.e. Cordobia + Gallardoa + Mionandra), and five supporting Peixotoa. Cordobia and Gallardoa are proposed as synonyms of Mionandra, alongside the necessary combinations, typifications, and identification keys. Conclusions – Morphological characters related to the degree of connation of the stipules, leaf indumentum type, petiole length, inflorescence architecture, number of flowers per inflorescence, presence of a peduncle in the 1-flowered cincinni, sepal connation, posture and texture, petal width and margin integrity, staminode presence, shape and size, and the shape of the apex of styles were key in circumscribing these lineages. Mionandra s.l. is proposed and characterised, including a new combination, an identification key to distinguish its species, a distribution map, and taxonomy notes

Barking up the wrong tree: the dangers of taxonomic misidentification in molecular phylogenetic studies.

– is a Brazilian endemic genus that has sat uncomfortably in Convolvulaceae where it was placed due to an enlarged and adnate fruit bract typical of . A recent molecular phylogeny suggested that two of its five morphologically almost identical species actually belong to two different families, Malpighiaceae (superrosids) and Ehretiaceae (superasterids). Later studies have demonstrated that effectively belongs to Ehretiaceae, but the proposal of one species belonging to Malpighiaceae has remained problematic. In this study, we re-assess this hypothesis, discuss the issues that have led to this assumption, and offer insights on the importance of carefully using herbarium collections and incorporating morphological evidence in systematic studies. – Sequences of , , and ITS for all 77 currently accepted genera of Malpighiaceae, and Elatinaceae (outgroup) were compiled from GenBank and analysed with Maximum Likelihood and Bayesian Inference criteria for nuclear, plastid and combined datasets. Additional database and herbarium studies were performed to locate and analyse all duplicates of the holotype of to check for misidentified or contaminated material. – Our examination of expanded DNA datasets and herbarium sheets of all isotypes revealed that a mistake in tissue sampling was, in fact, what led to this species being proposed to belong in Malpighiaceae. Kew’s isotype had a leaf of Malpighiaceae (likely ) stored in the fragment capsule, which was sampled and sequenced instead of the actual leaves of . Recently published studies have settled the placement of in Ehretiaceae (Boraginales) and proposed three additional species. – DNA sequences can be helpful in classifying taxa when morphology is conflicting or of a doubtful interpretation, with molecular phylogenetic placement being established as a popular tool accelerating the discovery of systematic relationships. Nonetheless, molecular techniques are also susceptible to methodological mistakes, which necessitates building a solid foundation of plant morphology and taxonomy to avoid artefacts in phylogenetic studies

Mechanical ventilation in patients with cardiogenic pulmonary edema : a sub-analysis of the LUNG SAFE study

Patients with acute respiratory failure caused by cardiogenic pulmonary edema (CPE) may require mechanical ventilation that can cause further lung damage. Our aim was to determine the impact of ventilatory settings on CPE mortality. Patients from the LUNG SAFE cohort, a multicenter prospective cohort study of patients undergoing mechanical ventilation, were studied. Relationships between ventilatory parameters and outcomes (ICU discharge/hospital mortality) were assessed using latent mixture analysis and a marginal structural model. From 4499 patients, 391 meeting CPE criteria (median age 70 [interquartile range 59-78], 40% female) were included. ICU and hospital mortality were 34% and 40%, respectively. ICU survivors were younger (67 [57-77] vs 74 [64-80] years, p < 0.001) and had lower driving (12 [8-16] vs 15 [11-17] cmHO, p < 0.001), plateau (20 [15-23] vs 22 [19-26] cmHO, p < 0.001) and peak (21 [17-27] vs 26 [20-32] cmHO, p < 0.001) pressures. Latent mixture analysis of patients receiving invasive mechanical ventilation on ICU day 1 revealed a subgroup ventilated with high pressures with lower probability of being discharged alive from the ICU (hazard ratio [HR] 0.79 [95% confidence interval 0.60-1.05], p = 0.103) and increased hospital mortality (HR 1.65 [1.16-2.36], p = 0.005). In a marginal structural model, driving pressures in the first week (HR 1.12 [1.06-1.18], p < 0.001) and tidal volume after day 7 (HR 0.69 [0.52-0.93], p = 0.015) were related to survival. Higher airway pressures in invasively ventilated patients with CPE are related to mortality. These patients may be exposed to an increased risk of ventilator-induced lung injury. Trial registration Clinicaltrials.gov NCT02010073

Brazilian Flora 2020: Leveraging the power of a collaborative scientific network

International audienceThe shortage of reliable primary taxonomic data limits the description of biological taxa and the understanding of biodiversity patterns and processes, complicating biogeographical, ecological, and evolutionary studies. This deficit creates a significant taxonomic impediment to biodiversity research and conservation planning. The taxonomic impediment and the biodiversity crisis are widely recognized, highlighting the urgent need for reliable taxonomic data. Over the past decade, numerous countries worldwide have devoted considerable effort to Target 1 of the Global Strategy for Plant Conservation (GSPC), which called for the preparation of a working list of all known plant species by 2010 and an online world Flora by 2020. Brazil is a megadiverse country, home to more of the world's known plant species than any other country. Despite that, Flora Brasiliensis, concluded in 1906, was the last comprehensive treatment of the Brazilian flora. The lack of accurate estimates of the number of species of algae, fungi, and plants occurring in Brazil contributes to the prevailing taxonomic impediment and delays progress towards the GSPC targets. Over the past 12 years, a legion of taxonomists motivated to meet Target 1 of the GSPC, worked together to gather and integrate knowledge on the algal, plant, and fungal diversity of Brazil. Overall, a team of about 980 taxonomists joined efforts in a highly collaborative project that used cybertaxonomy to prepare an updated Flora of Brazil, showing the power of scientific collaboration to reach ambitious goals. This paper presents an overview of the Brazilian Flora 2020 and provides taxonomic and spatial updates on the algae, fungi, and plants found in one of the world's most biodiverse countries. We further identify collection gaps and summarize future goals that extend beyond 2020. Our results show that Brazil is home to 46,975 native species of algae, fungi, and plants, of which 19,669 are endemic to the country. The data compiled to date suggests that the Atlantic Rainforest might be the most diverse Brazilian domain for all plant groups except gymnosperms, which are most diverse in the Amazon. However, scientific knowledge of Brazilian diversity is still unequally distributed, with the Atlantic Rainforest and the Cerrado being the most intensively sampled and studied biomes in the country. In times of “scientific reductionism”, with botanical and mycological sciences suffering pervasive depreciation in recent decades, the first online Flora of Brazil 2020 significantly enhanced the quality and quantity of taxonomic data available for algae, fungi, and plants from Brazil. This project also made all the information freely available online, providing a firm foundation for future research and for the management, conservation, and sustainable use of the Brazilian funga and flora

Growing knowledge: an overview of Seed Plant diversity in Brazil

Abstract An updated inventory of Brazilian seed plants is presented and offers important insights into the country's biodiversity. This work started in 2010, with the publication of the Plants and Fungi Catalogue, and has been updated since by more than 430 specialists working online. Brazil is home to 32,086 native Angiosperms and 23 native Gymnosperms, showing an increase of 3% in its species richness in relation to 2010. The Amazon Rainforest is the richest Brazilian biome for Gymnosperms, while the Atlantic Rainforest is the richest one for Angiosperms. There was a considerable increment in the number of species and endemism rates for biomes, except for the Amazon that showed a decrease of 2.5% of recorded endemics. However, well over half of Brazillian seed plant species (57.4%) is endemic to this territory. The proportion of life-forms varies among different biomes: trees are more expressive in the Amazon and Atlantic Rainforest biomes while herbs predominate in the Pampa, and lianas are more expressive in the Amazon, Atlantic Rainforest, and Pantanal. This compilation serves not only to quantify Brazilian biodiversity, but also to highlight areas where there information is lacking and to provide a framework for the challenge faced in conserving Brazil's unique and diverse flora