212 research outputs found
Visualising data stories together: Reflections on data journalism education from the Bournemouth University Datalabs Project.
Therapeutic plasma exchange in children with acute liver failure: assessment of laboratory parameters
The State Change Per Cycle Map a novel system-theoretic analysis tool for periodically-driven ReRAM cells
Memristive devices are the subject of extensive studies nowadays. While the
Dynamic Route Map is a powerful tool for analyzing the response of first-order
memristors under DC stimuli, the development of an equivalent tool for
investigating the response of these devices to AC stimuli is still an open
question. Recently, Pershin and Slipko introduced a graphic method, which we
name Time Average State Dynamic Route (TA-SDR), applicable to study first-order
memristors subject to periodic rectangular pulse train-based stimuli. In this paper
we introduce an alternative investigation tool, referred to as State Change Per
Cycle Map (SCPCM), which is applicable in these very same scenarios. The novel
analysis technique, inspired by the work of the French mathematician Henri
Poincaré, reduces the investigation of a first-order non-autonomous
continuous-time system to a simpler study of a first-order discrete-time
map. A State Change Per Cycle Map defines precisely how the stimulus
modulates each of the admissible device memory states over one input cycle.
It is derivable either by means of numerical simulations, where a model for the
ReRAM cell is available, or experimentally, in the case where the device memory
state is accessible. While the predictive capability of a TA-SDR is limited to those
case studies, where the AC periodic voltage signal applied across the device
induces negligible changes in the respective memory state over each cycle, the
conclusions drawn by analyzing a SCPCM have general validity, irrespective of the
properties of the stimulus. The advantages of the novel analysis method for
periodically driven ReRAM cells over the classical TA-SDR tool are highlighted
through a number of case studies, some of which reveal the interesting capability
of the ReRAM cell to display multiple oscillatory operating modes upon periodic
stimulation via trains with a suitable number of SET and RESET pulses per period
Theoretico-experimental analysis of bistability in the oscillatory response of a TaOx ReRAM to pulse train stimuli
Fading memory is the capability of a physical system to approach a unique
asymptotic behaviour, irrespective of the initial conditions, when stimulated by an
input from a certain class. Standard stimuli from the AC periodic class typically
induce fading memory effects in non-volatile memristors, as uncovered for the
first time back in 2016. Very recently, a deep investigation of resistance switching
phenomena in a TaOx resistive random access memory cell revealed the
capability of the nano-device to exhibit one of two possible oscillatory
behaviours, depending upon the initial condition, when subject to a particular
periodic excitation. This interesting finding was, however, left unexplained.
Bistability is the simplest form of local fading memory. In a system, endowed
with local fading memory under a given stimulus, the initial condition does not
affect the long-term behaviour of the state as long as it is drawn from the basin of
attraction of either of the distinct coexisting state-space attractors (two limit
cycles for the periodically forced memristor acting as a bistable oscillator).
Here, the history of the system, encoded in the initial condition, is, thus,
erasable only locally through ad hoc stimulation. Motivated by the discovery of
local history erase effects in our resistive random access memory cell, this
study applies a powerful system-theoretic tool, enabling the analysis of the
response of first-order systems to square pulse train-based periodic stimuli,
known as the time-average state dynamic route, to an accurate physics-based
mathematicalmodel, earlier fitted to the nano-device, to determine a strategy
for specifying the parameters of an excitation signal, consisting of the
sequence of two square pulses of opposite polarity per period so as to
induce various forms of monostability or multistability in the non-volatile
memristor. In particular, as an absolute novelty in the literature, experimental
measurements validate the theoretical prediction on the capability of the
device to operate as one of two distinct oscillators, depending upon the initial
condition, under a specific pulse train excitation signal. The coexistence of
multiple oscillatory operating modes in the periodically forced resistive random access memory cell, an example par excellence of their unique nonlinear
dynamics, may inspire the development and circuit implementation of
novel sensing and mem-computing paradigms
First report of occurrence, distribution, and composition of microplastics in surface waters of the Sea of Marmara, Turkey
Plastic is produced today in large quantities and used for many purposes. At the end of use, a large part of it gets into the environment, often into the sea and there it is fragmented into the smallest fragments, so-called microplastic (MP). MPs pose a serious challenge to the marine environment such as the sources and properties of MP particles, their impact on marine organisms, and the challenges of environmental pollution. This work, carried out in the fourteen sites in the area, is the first reference to the detection of MP distribution at surface waters in the Sea of Marmara, Turkey. As a result of this study, the average level of MP in the surface was determined to be 1.263 item/m(2). The results were higher compared of the most other adjacent regions and show that the Sea of Marmara started to face that problem.Kartal MunicipalityThe authors gratefully acknowledge the Sevinc-Erdal Inonu Foundation, owner of the main project MAREM (Marmara Environmental Monitoring), and also the crew of the vessel 'Oktay 4' for their help in collecting the material, and to the Kartal Municipality and the mayor Altinok Ors, for partial financial support to the main project. The authors thank Prof. Dr. Oguz Okay, Esra Su, and Burak Tavsanli from Chemistry Department, Istanbul Technical University for FTIR and DSC measurements
Microencapsulation of Phenolic Extracts from Cocoa Shells to Enrich Chocolate Bars
Cocoa bean shells were subjected to green extraction technologies, based on the absence of toxic organic solvents, to recover polyphenols; the extract was then encapsulated using a spray dryer and maltodextrin as coating agent. The best conditions observed in the spray drying tests (core-to-coating ratio 1:5; inlet temperature 150 °C; flow rate 6 ml min-1) were applied to produce the microcapsules used to enrich the same cocoa mass as the shells and processed for the preparation of the chocolate bars. Sensory analysis showed no significant differences between enriched chocolate bar and the unenriched reference one, except for the appearance. Both samples were then subjected to accelerated storage tests, at the end of which the polyphenols in the control chocolate bar (0.85 g 100 g-1) were reduced by about 50% (0.42 g 100 g-1), while in the enriched chocolate (1.17 g 100 g-1) by only 22% (0.97 g 100 g-1). The proposed process significantly enriched the chocolate bars with phenolic antioxidants recovered from cocoa waste without increasing the sensations of bitterness and astringency
A combined ULBP2 and SEMA5A expression signature as a prognostic and predictive biomarker for colon cancer
Background: Prognostic biomarkers for cancer have the power to change the course of disease if they add value beyond known prognostic factors, if they can help shape treatment protocols, and if they are reliable. The aim of this study was to identify such biomarkers for colon cancer and to understand the molecular mechanisms leading to prognostic stratifications based on these biomarkers. Methods and Findings: We used an in house R based script (SSAT) for the in silico discovery of stage-independent prognostic biomarkers using two cohorts, GSE17536 and GSE17537, that include 177 and 55 colon cancer patients, respectively. This identified 2 genes, ULBP2 and SEMA5A, which when used jointly, could distinguish patients with distinct prognosis. We validated our findings using a third cohort of 48 patients ex vivo. We find that in all cohorts, a combined ULBP2/SEMA5A classification (SU-GIB) can stratify distinct prognostic sub-groups with hazard ratios that range from 2.4 to 4.5 (p=0.01) when overall- or cancer-specific survival is used as an end-measure, independent of confounding prognostic parameters. In addition, our preliminary analyses suggest SU-GIB is comparable to Oncotype DX colon(®) in predicting recurrence in two different cohorts (HR: 1.5-2; p=0.02). SU-GIB has potential as a companion diagnostic for several drugs including the PI3K/mTOR inhibitor BEZ235, which are suitable for the treatment of patients within the bad prognosis group. We show that tumors from patients with worse prognosis have low EGFR autophosphorylation rates, but high caspase 7 activity, and show upregulation of pro-inflammatory cytokines that relate to a relatively mesenchymal phenotype. Conclusions: We describe two novel genes that can be used to prognosticate colon cancer and suggest approaches by which such tumors can be treated. We also describe molecular characteristics of tumors stratified by the SU-GIB signature. © Ivyspring International Publisher
Influence of mercury exposure on blood pressure, resting heart rate and heart rate variability in French Polynesians: a cross-sectional study
<p>Abstract</p> <p>Background</p> <p>Populations which diet is rich in seafood are highly exposed to contaminants such as mercury, which could affect cardiovascular risk factors</p> <p>Objective</p> <p>To assess the associations between mercury and blood pressure (BP), resting heart rate (HR) and HR variability (HRV) among French Polynesians</p> <p>Methods</p> <p>Data were collected among 180 adults (≥ 18 years) and 101 teenagers (12-17 years). HRV was measured using a two-hour ambulatory electrocardiogram (Holter) and BP was measured using a standardized protocol. The association between mercury and HRV and BP parameters was studied using analysis of variance (ANOVA) and analysis of covariance (ANCOVA)</p> <p>Results</p> <p>Among teenagers, the high frequency (HF) decreased between the 2<sup>nd </sup>and 3<sup>rd </sup>tertile (380 vs. 204 ms<sup>2</sup>, p = 0.03) and a similar pattern was observed for the square root of the mean squared differences of successive R-R intervals (rMSSD) (43 vs. 30 ms, p = 0.005) after adjusting for confounders. In addition, the ratio low/high frequency (LF/HF) increased between the 2<sup>nd </sup>and 3<sup>rd </sup>tertile (2.3 vs. 3.0, p = 0.04). Among adults, the standard deviation of R-R intervals (SDNN) tended to decrease between the 1<sup>st </sup>and 2<sup>nd </sup>tertile (84 vs. 75 ms, p = 0.069) after adjusting for confounders. Furthermore, diastolic BP tended to increase between the 2<sup>nd </sup>and 3<sup>rd </sup>tertile (86 vs. 91 mm Hg, p = 0.09). No significant difference was observed in resting HR or pulse pressure (PP)</p> <p>Conclusions</p> <p>Mercury was associated with decreased HRV among French Polynesian teenagers while no significant association was observed with resting HR, BP, or PP among teenagers or adults</p
Heterozygous BTNL8 variants in individuals with multisystem inflammatory syndrome in children (MIS-C)
\ua9 2024 Bellos et al.Multisystem inflammatory syndrome in children (MIS-C) is a rare condition following SARS-CoV-2 infection associated with intestinal manifestations. Genetic predisposition, including inborn errors of the OAS-RNAseL pathway, has been reported. We sequenced 154 MIS-C patients and utilized a novel statistical framework of gene burden analysis, “burdenMC,” which identified an enrichment for rare predicted-deleterious variants in BTNL8 (OR = 4.2, 95% CI: 3.5-5.3, P < 10-6). BTNL8 encodes an intestinal epithelial regulator of Vγ4+γδ T cells implicated in regulating gut homeostasis. Enrichment was exclusive to MIS-C, being absent in patients with COVID-19 or bacterial disease. Using an available functional test for BTNL8, rare variants from a larger cohort of MIS-C patients (n = 835) were tested which identified eight variants in 18 patients (2.2%) with impaired engagement of Vγ4+γδ T cells. Most of these variants were in the B30.2 domain of BTNL8 implicated in sensing epithelial cell status. These findings were associated with altered intestinal permeability, suggesting a possible link between disrupted gut homeostasis and MIS-C-associated enteropathy triggered by SARS-CoV-2
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