Drive-By Geography: Perceptions of Urban Growth and Land Use in Hattiesburg, Mississippi

One of the most important mechanisms in which human societies have transformed the earth is through urbanization. Land use changes such as from cropland to businesses are important ways in which urban growth transforms landscapes. This study uses qualitative and quantitative methods in order to visualize where urban growth and landscape changes are occurring between Hattiesburg and Columbia, Mississippi within the first decade of the 21st century. The methods I used involved conducting transects and creating hand-drawn maps, conversion of hand-drawn maps into ArcGIS shapefiles for interpretation and analysis, and lastly juxtaposition of shapefiles onto Landsat imagery. To analyze the data I wrote narratives, created a multiple ring buffer, and calculated the point density of the landscape features. The results of this research show that urban growth and related land use change is expanding in a pattern relative to that of the Burgess Model

Parametric Optimization of Visible Wavelength Gold Lattice Geometries for Improved Plasmon-Enhanced Fluorescence Spectroscopy

The exploitation of spectro-plasmonics will allow for innovations in optical instrumentation development and the realization of more efficient optical biodetection components. Biosensors have been shown to improve the overall quality of life through real-time detection of various antibody-antigen reactions, biomarkers, infectious diseases, pathogens, toxins, viruses, etc. has led to increased interest in the research and development of these devices. Further advancements in modern biosensor development will be realized through novel electrochemical, electromechanical, bioelectrical, and/or optical transduction methods aimed at reducing the size, cost, and limit of detection (LOD) of these sensor systems. One such method of optical transduction involves the exploitation of the plasmonic resonance of noble metal nanostructures. This thesis presents the optimization of the electric (E) field enhancement granted from localized surface plasmon resonance (LSPR) via parametric variation of periodic gold lattice geometries using finite difference time domain (FDTD) software. Comprehensive analyses of cylindrical, square, star, and triangular lattice feature geometries were performed to determine the largest surface E-field enhancement resulting from LSPR for reducing the LOD of plasmon-enhanced fluorescence (PEF). The design of an optical transducer engineered to yield peak E-field enhancement and, therefore, peak excitation enhancement of fluorescent labels would enable for improved emission enhancement of these labels. The methodology presented in this thesis details the optimization of plasmonic lattice geometries for improving current visible wavelength fluorescence spectroscopy

Biotic Interactions Shape the Ecological Distributions of Staphylococcus Species.

Many metagenomic sequencing studies have observed the presence of closely related bacterial species or genotypes in the same microbiome. Previous attempts to explain these patterns of microdiversity have focused on the abiotic environment, but few have considered how biotic interactions could drive patterns of microbiome diversity. We dissected the patterns, processes, and mechanisms shaping the ecological distributions of three closely related Staphylococcus species in cheese rind biofilms. Paradoxically, the most abundant species (S. equorum) is the slowest colonizer and weakest competitor based on growth and competition assays in the laboratory. Through in vitro community reconstructions, we determined that biotic interactions with neighboring fungi help resolve this paradox. Species-specific stimulation of the poor competitor by fungi of the genus Scopulariopsis allows S. equorum to dominate communities in vitro as it does in situ Results of comparative genomic and transcriptomic experiments indicate that iron utilization pathways, including a homolog of the S. aureus staphyloferrin B siderophore operon pathway, are potential molecular mechanisms underlying Staphylococcus-Scopulariopsis interactions. Our integrated approach demonstrates that fungi can structure the ecological distributions of closely related bacterial species, and the data highlight the importance of bacterium-fungus interactions in attempts to design and manipulate microbiomes.ImportanceDecades of culture-based studies and more recent metagenomic studies have demonstrated that bacterial species in agriculture, medicine, industry, and nature are unevenly distributed across time and space. The ecological processes and molecular mechanisms that shape these distributions are not well understood because it is challenging to connect in situ patterns of diversity with mechanistic in vitro studies in the laboratory. Using tractable cheese rind biofilms and a focus on coagulase-negative staphylococcus (CNS) species, we demonstrate that fungi can mediate the ecological distributions of closely related bacterial species. One of the Staphylococcus species studied, S. saprophyticus, is a common cause of urinary tract infections. By identifying processes that control the abundance of undesirable CNS species, cheese producers will have more precise control on the safety and quality of their products. More generally, Staphylococcus species frequently co-occur with fungi in mammalian microbiomes, and similar bacterium-fungus interactions may structure bacterial diversity in these systems

Small colony variants in Staphylococcus aureus and other species : antibiotic selection, antimicrobial susceptibility, and biofilm formation

Staphylococcus aureus is one of the leading causes of hospital acquired infections. The ability of S. aureus to acquire resistance to a diverse range of antimicrobial compounds, results in limited treatment options, particularly in methicillin-resistant S. aureus. A mechanism by which S. aureus develops reduced susceptibility to antimicrobials is through the formation of small colony variants (SCVs). Reduced antimicrobial susceptibility in S. aureus SCVs is not related to ‘classical’ mechanisms of resistance, but occurs as a direct result of the development of the SCV phenotype. S. aureus SCVs are frequently associated with defects in the bacterial electron transport chain and these defects are responsible for the characteristics associated with the SCV phenotype. This study aimed to investigate and characterise the selection of S. aureus SCVs in the presence of various antibiotics and also to examine their biofilm forming capabilities. Four members of the aminoglycoside family of antibiotics were shown to select for S. aureus SCVs. In addition, a broad range (X 0.25 MIC – X 4 MIC) of aminoglycoside concentrations were shown to select for S. aureus SCVs. Characterisation of these isolates revealed that differences in auxotrophy, biochemical profiles, carotenoid production, haemolysis, levels of intracellular ATP, mutation frequency and reversion rate were present. Members of the tetracycline family of antibiotics were also shown to select for S. aureus SCVs. Tetracycline selected S. aureus SCVs show attenuated catalase, coagulase and heamolysis activity and reduced production of extracellular DNase and lipase and reduced susceptibility to various antimicrobial agents. As SCVs have been linked to persistent and recurrent infections their ability to form biofilms was also investigated. A range of S. aureus SCVs isolated from various backgrounds were shown to form greater biofilms in comparison to parent strains, which was attributed to increased production of polysaccharide intracellular adhesin. In addition S. aureus SCV biofilms displayed a more pronounced reduction in antimicrobial susceptibility, which was attributed to a reduction in antimicrobial penetration through SCV biofilms. Limited discovery of novel antibiotics in recent years and the observation that S. aureus SCVs can be selected for by various antimicrobial compounds highlights the need for novel antimicrobial compounds. Accordingly, an investigation into the susceptibility of S. aureus to various plant compounds was undertaken. Both S. aureus SCVs and parent strains showed susceptibility to five plant antimicrobials tested, of which SCVs were more susceptible to cinnamon bark, green tea and oregano. Resistance to these plant antimicrobials could not be induced and synergistic relationships between certain plant antimicrobials and antibiotics were demonstrated. Finally, formation of SCVs in bacterial species other than S. aureus was examined. Gentamicin induced SCV selection in Escherichia coli, Pseudomonas aeruginosa and S. epidermidis as well as chloroamphenicol and ciprofloxacin in E. coli and tetracycline in S. epidermidis. SCVs from these bacterial species shared common characteristics associated with the SCV phenotype including altered growth and biochemical profiles, auxotrophy for compounds involved in electron transport, reduction in expression of virulence factors and reduced antimicrobial susceptibility. Additionally all SCVs showed an increased capacity to form biofilms. The ability of certain antibiotics to select for SCVs and their increased capacity to form biofilms suggest that SCV are an important adaptation to aid survival and persistence in times of stress. Reduced susceptibility to commonly used antibiotics in SCVs signifies that the development of new antimicrobial compounds is required. Harnessing naturally occurring plant antimicrobials and their synergistic relationship with antibiotics may offer a novel approach to treating antibiotic resistant infections whilst overcoming antibiotic selection for SCVs.EThOS - Electronic Theses Online ServiceGBUnited Kingdo

Probability Distributions in the Glass Failure Prediction Model

Glass, a brittle material, fractures under tensile stress acting over a time duration. Lateral loads, such as wind, acting on a simply supported rectangular glass lite, put one surface of the lite primarily into tension. ASTM E 1300 defines load resistance of glass as the uniform lateral loading acting over a duration of 3 seconds that is associated with a probability of breakage of 8 lites per 1000 at the first occurrence of the loading. To determine load resistance, the underlying window glass failure prediction model facilitates determination of a probability distribution of 3 second equivalent failure loads, P3. The glass failure prediction model is based on a Weibull distribution, and most people believe the distribution of P3 is, in fact, a Weibull distribution. However, the authors contend that this is not the case. This paper provides an explanation of the glass failure prediction model, its basis, and a discussion of the method for determining surface flaw parameters with an example. The authors demonstrate the distribution of the equivalent failure loads does not follow a Weibull distribution, and they will elucidate the relationship between the distribution of P3 and the Weibull distribution

Sport-Related Catastrophic Traumatic Injury and Access to Preventative and Emergency Resources in High Schools

Prevention and management of catastrophic traumatic injury relies on the implementation of evidence-based practices as well as early recognition and treatment of injury. The study purpose was to understand access to preventative and emergency resources in high schools and determine differences in access to these resources between schools with previous reported catastrophic traumatic injuries and those without and by whether the injury was fatal or nonfatal. 224 high schools with a previous injury and 2240 control schools were invited to complete a survey regarding access to emergency and preventive resources: 135 schools participated. Publicly available databases were utilized to assess access to resources and school socio-economic status. Differences in access to emergency and preventative resources was associated with history of previous catastrophic injury event and severity of the injury. Access to athletic training services, NATA Safe Sport Award designation, and higher school socioeconomic status was associated with lower injury severity.Master of Art