10,619 research outputs found

    Septin filament organization in Saccharomyces cerevisiae.

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    Septins are a family of GTP-binding, membrane-interacting cytoskeletal proteins, highly conserved and essential in all eukaryotes (with the exception of plants). Septins play important roles in a number of cellular events that involve membrane remodeling and compartmentalization. One such event is cytokinesis, the last stage of cell division. While cytokinesis is ultimately achieved via the mechanical contraction of an actomyosin ring at the septum, determination of the location where cytokinesis will take place, and recruitment of factors involved in signaling events leading to septation requires the activity of septins. We are working towards dissecting the properties of septins from the budding yeast Saccharomyces cerevisiae, where they were first discovered as cell cycle mutants. In our studies we have employed several complementary electron microscopy techniques to describe the organization and structure of septins both in vitro and in situ

    LIBOR additive model calibration to swaptions markets

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    In the current paper, we introduce a new calibration methodology for the LIBOR market model driven by LIBOR additive processes based in an inverse problem. This problem can be splitted in the calibration of the continuous and discontinuous part, linking each part of the problem with at-the-money and in/out -of -the-money swaption volatilies. The continuous part is based on a semidefinite programming (convex) problem, with constraints in terms of variability or robustness, and the calibration of the Lévy measure is proposed to calibrate inverting the Fourier Transform

    On the relationship between bilevel decomposition algorithms and direct interior-point methods

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    Engineers have been using bilevel decomposition algorithms to solve certain nonconvex large-scale optimization problems arising in engineering design projects. These algorithms transform the large-scale problem into a bilevel program with one upperlevel problem (the master problem) and several lower-level problems (the subproblems). Unfortunately, there is analytical and numerical evidence that some of these commonly used bilevel decomposition algorithms may fail to converge even when the starting point is very close to the minimizer. In this paper, we establish a relationship between a particular bilevel decomposition algorithm, which only performs one iteration of an interior-point method when solving the subproblems, and a direct interior-point method, which solves the problem in its original (integrated) form. Using this relationship, we formally prove that the bilevel decomposition algorithm converges locally at a superlinear rate. The relevance of our analysis is that it bridges the gap between the incipient local convergence theory of bilevel decomposition algorithms and the mature theory of direct interior-point methods

    Structural insight into TPX2-stimulated microtubule assembly

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    During mitosis and meiosis, microtubule (MT) assembly is locally upregulated by the chromatin-dependent Ran-GTP pathway. One of its key targets is the MT-associated spindle assembly factor TPX2. The molecular mechanism of how TPX2 stimulates MT assembly remains unknown because structural information about the interaction of TPX2 with MTs is lacking. Here, we determine the cryo-electron microscopy structure of a central region of TPX2 bound to the MT surface. TPX2 uses two flexibly linked elements ('ridge' and 'wedge') in a novel interaction mode to simultaneously bind across longitudinal and lateral tubulin interfaces. These MT-interacting elements overlap with the binding site of importins on TPX2. Fluorescence microscopy-based in vitro reconstitution assays reveal that this interaction mode is critical for MT binding and facilitates MT nucleation. Together, our results suggest a molecular mechanism of how the Ran-GTP gradient can regulate TPX2-dependent MT formation
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