A Use Case of Big Data

Modern science significantly depends on data and data technologies to quantitatively describe the objects under research. In our polar research, we employ a sophisticated set of instruments to study the ice-sheets. The data we collect and process comes to more than 100 TB a year across several physically distinct campaigns. This can be defined as big data. The technologies we apply through the phases of data collection, analysis, visualization, modelling, publication, and archiving invoke some new big-data machinery that we would like to share and discuss with other colleagues in different fields

Identification and control of subglacial water networks under Dome A, Antarctica

Subglacial water in continental Antarctica forms by melting of basal ice due to geothermal or frictional heating. Subglacial networks transport the water from melting areas and can facilitate sliding by the ice sheet over its bed. Subglacial water flow is driven mainly by gradients in overburden pressure and bed elevation. We identify small (median 850 m) water bodies within the Gamburtsev Subglacial Mountains in East Antarctica organized into long (20–103 km) coherent drainage networks using a dense (5 km) grid of airborne radar data. The individual water bodies are smaller on average than the water bodies contained in existing inventories of Antarctic subglacial water and most are smaller than the mean ice thickness of 2.5 km, reflecting a focusing of basal water by rugged topography. The water system in the Gamburtsev Subglacial Mountains reoccupies a system of alpine overdeepenings created by valley glaciers in the early growth phase of the East Antarctic Ice Sheet. The networks follow valley floors either uphill or downhill depending on the gradient of the ice sheet surface. In cases where the networks follow valley floors uphill they terminate in or near plumes of freeze-on ice, indicating source to sink transport within the basal hydrologic system. Because the ice surface determines drainage direction within the bed-constrained network, the system is bed-routed but surface-directed. Along-flow variability in the structure of the freeze-on plumes suggests variability in the networks on long (10s of ka) timescales, possibly indicating changes in the basal thermal state

Inspection time and general speed of processing

Recent research suggests that the relationship between inspection time (IT) and psychometric intelligence arises because IT is a measure of general speed of processing (Gs). However, hierarchical models of intelligence propose several distinct speed of processing factors; this study examines IT in relation to these multiple speed factors. Participants (N=102) completed tests of speed of processing yielding 18 measures. Factor analysis revealed a second order general speed factor (Gs) and four group factors: perceptual speed, visualisation speed, decision time and movement time. IT correlated with a visualisation speed factor (r=0.36) and with a perceptual speed factor (r=0.28). However, the correlation between IT and perceptual speed was near-zero when the correlation with visualisation speed was partialled out. These findings are consistent with the notion that IT is a measure of Gs but suggest that IT most directly measures speed of visualisation processes. These results are also congruent with research on the psychophysics of IT.Tess A. O’Connor and Nicholas R. Burnshttp://www.elsevier.com/wps/find/journaldescription.cws_home/603/description#descriptio

Multidecadal Basal Melt Rates and Structure of the Ross Ice Shelf, Antarctica, Using Airborne Ice Penetrating Radar

Basal melting of ice shelves is a major source of mass loss from the Antarctic Ice Sheet. In situ measurements of ice shelf basal melt rates are sparse, while the more extensive estimates from satellite altimetry require precise information about firn density and characteristics of near‐surface layers. We describe a novel method for estimating multidecadal basal melt rates using airborne ice penetrating radar data acquired during a 3‐year survey of the Ross Ice Shelf. These data revealed an ice column with distinct upper and lower units whose thicknesses change as ice flows from the grounding line toward the ice front. We interpret the lower unit as continental meteoric ice that has flowed across the grounding line and the upper unit as ice formed from snowfall onto the relatively flat ice shelf. We used the ice thickness difference and strain‐induced thickness change of the lower unit between the survey lines, combined with ice velocities, to derive basal melt rates averaged over one to six decades. Our results are similar to satellite laser altimetry estimates for the period 2003–2009, suggesting that the Ross Ice Shelf melt rates have been fairly stable for several decades. We identify five sites of elevated basal melt rates, in the range 0.5–2 m a⁻¹, near the ice shelf front. These hot spots indicate pathways into the sub‐ice‐shelf ocean cavity for warm seawater, likely a combination of summer‐warmed Antarctic Surface Water and modified Circumpolar Deep Water, and are potential areas of ice shelf weakening if the ocean warms

Freezing of ridges and water networks preserves the Gamburtsev Subglacial Mountains for millions of years

Once an ice sheet grows beyond a critical thickness, the basal thermal regime favors melting and development of subglacial water networks. Subglacial water is necessary for bedrock erosion, but the exact mechanisms that lead to preservation of subglacial topography are unclear. Here we resolve the freezing mechanisms that lead to long-term, high-altitude preservation across the Gamburtsev Subglacial Mountains in East Antarctica. Analyses of a comprehensive geophysical data set reveal a large-scale water network along valley floors. The ice sheet often drives subglacial water up steep topography where it freezes along high ridges beneath thinner ice. Statistical tests of hypsometry show the Gamburtsevs resemble younger midlatitude mountains, indicating exceptional preservation. We conclude that the Gamburtsevs have been shielded from erosion since the latest Eocene (∼34 Ma). These freezing mechanisms likely account for the spatial and temporal patterns of erosion and preservation seen in other glaciated mountain ranges

Comparison of AIRGrav and GT-1A airborne gravimeters for research applications

Airborne gravimetry has played a vital role in contributing to our knowledge of the subglacial environment in polar regions. Previous programs have produced extensive gravity data sets in Antarctica, but the resolution and accuracy of the data have been limited. We have evaluated the relative performance and suitability of two different airborne gravimeters for research applications from flight tests over the Canadian Rocky Mountains near Calgary. Survey design, mission profiles, and demands on the performance of an airborne gravimeter are different for the remote polar environment than for most commercial exploration surveys. Both systems, the AIRGrav and GT-1A, can produce higher-resolution data with improved flight efficiency than can the BGM-3 and LaCoste & Romberg gravimeters used in Antarctica. The AIRGrav and GT-1A systems are capable of draped flying of airborne gravity, allowing new applications for polar use. Both systems could provide the academic community with a significant increase in accuracy and horizontal resolution to enable major advances in understanding the subglacial environment. Compared to the GT-1A system, the AIRGrav system has a lower noise level and higher accuracy, and it is less sensitive to changing flight conditions — in particular, vertical accelerations during turbulent flights

New boundary conditions for the West Antarctic ice sheet: subglacial topography beneath Pine Island Glacier

Predictions about future changes in the Amundsen Sea sector of the West Antarctic ice sheet (WAIS) have been hampered by poorly known subglacial topography. Extensive airborne survey has allowed us to derive improved subglacial topography for the Pine Island Glacier basin. The trunk of this glacier lies in a narrow, 250-km long, 500-m deep sub-glacial trough, suggesting a long-lived and constrained ice stream. Two tributaries lie in similar troughs, others lie in less defined, shallower troughs. The lower basin of the glacier is surrounded by bedrock, which, after deglaciation and isostatic rebound, could rise above sea level. This feature would impede ice-sheet collapse initiated near the grounding line of this glacier, and prevent its progress into the deepest portions of WAIS. The inland-slope of the bed beneath the trunk of the glacier, however, confirms potential instability of the lower basin, containing sufficient ice to raise global sea by ∼24 cm

ALDH2 mediates 5-nitrofuran activity in multiple species

Understanding how drugs work in vivo is critical for drug design and for maximizing the potential of currently available drugs. 5-nitrofurans are a class of pro-drugs widely used to treat bacterial and trypanosome infections, but despite relative specificity 5-nitrofurans often cause serious toxic side-effects in people. Here, we use yeast, zebrafish and human in vitro systems to assess the biological activity of 5-nitrofurans, and identify a conserved interaction between aldehyde dehydrogenase (ALDH) 2 and 5-nitrofurans across these species. In addition, we show that the activity of nifurtimox, a 5-nitrofuran anti-trypanosome pro-drug, is dependent on zebrafish Aldh2 and that nifurtimox is a substrate for human ALDH2. This study reveals a conserved and biologically relevant ALDH2-5-nitrofuran interaction that may have important implications for managing the toxicity of 5nitrofuran treatment.PostprintPeer reviewe