21,766 research outputs found

    Considerations about effective dissemination of improved fish strains

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    Aquaculture production systems in developing countries are largely based on the use of unimproved species and strains. As knowledge and experience are accumulated in relation to the management, feeding and animal health issues of such production systems, the availability of genetically more productive stock becomes imperative in order to more effectively use resources. For instance, there is little point in providing ideal water conditions and optimum feed quality to fish that do not have the potential to grow faster and to be harvested on time, providing a product of the desired quality. Refinements in the production system and improvement of the stock used must progress hand in hand. In this paper we deal separately with genetic and non-genetic issues pertaining to the multiplication and dissemination of improved strains. The separation is somewhat arbitrary, and as will be evident from our discussion, there is frequent interaction between the two

    Functional Genomics Profiling of Bladder Urothelial Carcinoma MicroRNAome as a Potential Biomarker.

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    Though bladder urothelial carcinoma is the most common form of bladder cancer, advances in its diagnosis and treatment have been modest in the past few decades. To evaluate miRNAs as putative disease markers for bladder urothelial carcinoma, this study develops a process to identify dysregulated miRNAs in cancer patients and potentially stratify patients based on the association of their microRNAome phenotype to genomic alterations. Using RNA sequencing data for 409 patients from the Cancer Genome Atlas, we examined miRNA differential expression between cancer and normal tissues and associated differentially expressed miRNAs with patient survival and clinical variables. We then correlated miRNA expressions with genomic alterations using the Wilcoxon test and REVEALER. We found a panel of six miRNAs dysregulated in bladder cancer and exhibited correlations to patient survival. We also performed differential expression analysis and clinical variable correlations to identify miRNAs associated with tobacco smoking, the most important risk factor for bladder cancer. Two miRNAs, miR-323a and miR-431, were differentially expressed in smoking patients compared to nonsmoking patients and were associated with primary tumor size. Functional studies of these miRNAs and the genomic features we identified for potential stratification may reveal underlying mechanisms of bladder cancer carcinogenesis and further diagnosis and treatment methods for urothelial bladder carcinoma

    Investigation of Prediction Accuracy, Sensitivity, and Parameter Stability of Large-Scale Propagation Path Loss Models for 5G Wireless Communications

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    This paper compares three candidate large-scale propagation path loss models for use over the entire microwave and millimeter-wave (mmWave) radio spectrum: the alpha-beta-gamma (ABG) model, the close-in (CI) free space reference distance model, and the CI model with a frequency-weighted path loss exponent (CIF). Each of these models have been recently studied for use in standards bodies such as 3GPP, and for use in the design of fifth generation (5G) wireless systems in urban macrocell, urban microcell, and indoor office and shopping mall scenarios. Here we compare the accuracy and sensitivity of these models using measured data from 30 propagation measurement datasets from 2 GHz to 73 GHz over distances ranging from 4 m to 1238 m. A series of sensitivity analyses of the three models show that the physically-based two-parameter CI model and three-parameter CIF model offer computational simplicity, have very similar goodness of fit (i.e., the shadow fading standard deviation), exhibit more stable model parameter behavior across frequencies and distances, and yield smaller prediction error in sensitivity testing across distances and frequencies, when compared to the four-parameter ABG model. Results show the CI model with a 1 m close-in reference distance is suitable for outdoor environments, while the CIF model is more appropriate for indoor modeling. The CI and CIF models are easily implemented in existing 3GPP models by making a very subtle modification -- by replacing a floating non-physically based constant with a frequency-dependent constant that represents free space path loss in the first meter of propagation.Comment: Open access available at: http://ieeexplore.ieee.org/xpl/articleDetails.jsp?arnumber=743465

    Sunlight-mediated inactivation of health-relevant microorganisms in water: a review of mechanisms and modeling approaches.

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    Health-relevant microorganisms present in natural surface waters and engineered treatment systems that are exposed to sunlight can be inactivated by a complex set of interacting mechanisms. The net impact of sunlight depends on the solar spectral irradiance, the susceptibility of the specific microorganism to each mechanism, and the water quality; inactivation rates can vary by orders of magnitude depending on the organism and environmental conditions. Natural organic matter (NOM) has a large influence, as it can attenuate radiation and thus decrease inactivation by endogenous mechanisms. Simultaneously NOM sensitizes the formation of reactive intermediates that can damage microorganisms via exogenous mechanisms. To accurately predict inactivation and design engineered systems that enhance solar inactivation, it is necessary to model these processes, although some details are not yet sufficiently well understood. In this critical review, we summarize the photo-physics, -chemistry, and -biology that underpin sunlight-mediated inactivation, as well as the targets of damage and cellular responses to sunlight exposure. Viruses that are not susceptible to exogenous inactivation are only inactivated if UVB wavelengths (280-320 nm) are present, such as in very clear, open waters or in containers that are transparent to UVB. Bacteria are susceptible to slightly longer wavelengths. Some viruses and bacteria (especially Gram-positive) are susceptible to exogenous inactivation, which can be initiated by visible as well as UV wavelengths. We review approaches to model sunlight-mediated inactivation and illustrate how the environmental conditions can dramatically shift the inactivation rate of organisms. The implications of this mechanistic understanding of solar inactivation are discussed for a range of applications, including recreational water quality, natural treatment systems, solar disinfection of drinking water (SODIS), and enhanced inactivation via the use of sensitizers and photocatalysts. Finally, priorities for future research are identified that will further our understanding of the key role that sunlight disinfection plays in natural systems and the potential to enhance this process in engineered systems

    Pairing effects on the collectivity of quadrupole states around 32Mg

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    The first 2+ states in N=20 isotones including neutron-rich nuclei 32Mg and 30Ne are studied by the Hartree-Fock-Bogoliubov plus quasiparticle random phase approximation method based on the Green's function approach. The residual interaction between the quasiparticles is consistently derived from the hamiltonian density of Skyrme interactions with explicit velocity dependence. The B(E2) transition probabilities and the excitation energies of the first 2+ states are well described within a single framework. We conclude that pairing effects account largely for the anomalously large B(E2) value and the very low excitation energy in 32Mg.Comment: 14 pages, 9 figure

    The effect of aqueous alteration and metamorphism in the survival of presolar silicate grains in chondrites

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    Relatively small amounts (typically between 2-200 parts per million) of presolar grains have been preserved in the matrices of chondritic meteorites. The measured abundances of the different types of grains are highly variable from one chondrite to another, but are higher in unequilibrated chondrites that have experienced little or no aqueous alteration and/or metamorphic heating than in processed meteorites. A general overview of the abundances measured in presolar grains (particularly the recently identified presolar silicates) contained in primitive chondrites is presented. Here we will focus on the most primitive chondrite groups, as typically the highest measured abundances of presolar grains occur in primitive chondrites that have experienced little thermal metamorphism. Looking at the most aqueously altered chondrite groups, we find a clear pattern of decreasing abundance of presolar silicate grains with increasing level of aqueous alteration. We conclude that the measured abundances of presolar grains in altered chondrites are strongly biased by their peculiar histories. Scales quantifying the intensity of aqueous alteration and shock metamorphism in chondrites could correlate with the content in presolar silicates. To do this it would be required to infer the degree of destruction or homogenization of presolar grains in the matrices of primitive meteorites. To get an unbiased picture of the relative abundance of presolar grains in the different regions of the protoplanetary disk where first meteorites consolidated, future dedicated studies of primitive meteorites, IDPs, and collected materials from sample-return missions (like e.g. the planned Marco Polo) are urgently required.Comment: 15 pages, 3 figures, published in PASA as part of the Proceedings of the 2008 Torino Conference "The Origin of the Elements Heavier than Iron

    Theory of Decoupling in the Mixed Phase of Extremely Type-II Layered Superconductors

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    The mixed phase of extremely type-II layered superconductors in perpendicular magnetic field is studied theoretically via the layered XY model with uniform frustration. A partial duality analysis is carried out in the weak-coupling limit. It consistently accounts for both intra-layer (pancake) and inter-layer (Josephson) vortex excitations. The main conclusion reached is that dislocations of the two-dimensional (2D) vortex lattices within layers drive a unique second-order melting transition at high perpendicular fields between a low-temperature superconducting phase that displays a Josephson effect and a high-temperature ``normal'' phase that displays no Josephson effect. The former state is best described by weakly coupled 2D vortex lattices, while the latter state is best characterized by a decoupled vortex liquid. It is further argued on the basis of the duality analysis that the second-order melting transition converts itself into a first-order one as the perpendicular field is lowered and approaches the dimensional cross-over scale. The resulting critical endpoint potentially accounts for the same phenomenon that is observed in the mixed phase of clean high-temperature superconductors.Comment: 39 pgs. of PLAIN TeX, 2 postscript figs., published versio
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