Spatio-Temporal Vegetation Pixel Classification by Using Convolutional Networks

Plant phenology studies rely on long-term monitoring of life cycles of plants. High-resolution unmanned aerial vehicles (UAVs) and near-surface technologies have been used for plant monitoring, demanding the creation of methods capable of locating, and identifying plant species through time and space. However, this is a challenging task given the high volume of data, the constant data missing from temporal dataset, the heterogeneity of temporal profiles, the variety of plant visual patterns, and the unclear definition of individuals' boundaries in plant communities. In this letter, we propose a novel method, suitable for phenological monitoring, based on convolutional networks (ConvNets) to perform spatio-temporal vegetation pixel classification on high-resolution images. We conducted a systematic evaluation using high-resolution vegetation image datasets associated with the Brazilian Cerrado biome. Experimental results show that the proposed approach is effective, overcoming other spatio-temporal pixel-classification strategies

Natural history notes on worker size, colony size, and nest structure of Azteca muelleri Emery, 1893 (Hymenoptera: Formicidae) in Cecropia glaziovii (Rosales: Urticaceae) from the Atlantic Forest

Mutualistic association between Azteca Forel, 1878 ants and Cecropia Loefl. plants are one of the most studied interactions in Neotropics, however, natural history studies of Azteca species still poorly investigated due to the great effort required to conduct detailed descriptive studies. Here, we describe biological aspects of Azteca muelleri Emery, 1893 nesting in Cecropia glaziovii Snethl. in a fragment of Atlantic Forest, addressing (a) colony size; (b) nest distribution on the tree; and (c) worker and queen morphometrics. We collected two C. glaziovii saplings and counted characteristics of the nests and plants. We randomly selected 140 workers to measure and to determine whether intraspecific polymorphism occurs. Workers, immatures, and mealybugs were present in all hollow internodes of plant, and a queen was found. We found isometric morphological variation in A. muelleri. Our study provides new data to understand the biology of A. muelleri nesting in C. glaziovii, one of the most species-rich genera of arboreal ants known for the neotropics

β-cyclodextrin/isopentyl caffeate inclusion complex: synthesis, characterization and antileishmanial activity

Isopentyl caffeate (ICaf) is a bioactive ester widely distributed in nature. Our patented work has shown promising results of this molecule against Leishmania. However, ICaf shows poor solubility, which limits its usage in clinical settings. In this work, we have proposed the development of an inclusion complex of ICaf in -cyclodextrin (-CD), with the aim to improve the drug solubility, and thus, its bioavailability. The inclusion complex (ICaf:-CD) was developed applying three distinct methods, i.e., physical mixture (PM), kneading (KN) or co-evaporation (CO) in different molar proportions (0.25:1, 1:1 and 2:1). Characterization of the complexes was carried out by thermal analysis, Fourier-transform infrared spectroscopy (FT-IR), scanning electron microscopy (SEM) and molecular docking. The ICaf:-CD complex in a molar ratio of 1:1 obtained by CO showed the best complexation and, therefore, was selected for further analysis. Solubility assay showed a marked improvement in the ICaf:-CD (CO, 1:1) solubility profile when compared to the pure ICaf compound. Cell proliferation assay using ICaf:-CD complex showed an IC50 of 3.8 and 2.7 µg/mL against L. amazonesis and L. chagasi promastigotes, respectively. These results demonstrate the great potential of the inclusion complex to improve the treatment options for visceral and cutaneous leishmaniases.This research was funded by Banco do Nordeste (grant FUNDECI/2016.0015), Coordenação Aperfeiçoamento de Pessoal de Nivel Superior (CAPES) and Fundação de Ámparo à Pesquisa do Estado de Sergipe (FAPITEC) (PROCESSO: 88887.159533/2017-00 extração, encapsulação e caracterização de bioativos para o interesse biotecnologico). Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq 301964/2019-0 Chamada 06/2019, and Chamada CNPq nº 01/2019) and from the Portuguese Science and Technology Foundation (FCT) project UIDB/04469/2020 (strategic fund).info:eu-repo/semantics/publishedVersio

Allelic frequencies and statistical data obtained from 12 codis STR loci in an admixed population of the Brazilian Amazon

The allelic frequencies of 12 short tandem repeat loci were obtained from a sample of 307 unrelated individuals living in Macapá, a city in the northern Amazon region, Brazil. These loci are the most commonly used in forensics and paternity testing. Based on the allele frequency obtained for the population of Macapá, we estimated an interethnic admixture for the three parental groups (European, Native American and African) of, respectively, 46%, 35% and 19%. Comparing these allele frequencies with those of other Brazilian populations and of the Iberian Peninsula population, no significant distances were observed. The interpopulation genetic distances (FST coefficients) to the present database ranged from FST = 0.0016 between Macapá and Belém to FST = 0.0036 between Macapá and the Iberian Peninsula

Histórias do cotidiano

Documento que reúne a série “Histórias do Cotidiano”, que surgiu com o objetivo de reunir as produções literárias da comunidade universitária, tornando acessível o conhecimento produzido dentro da universidade para o maior número de pessoas. Na sua primeira edição foram selecionados poemas, contos e crônicas originais para a publicação nos canais oficiais da Biblioteca Universitária da UFSC, visando incentivar a criação literária

Whole-genome sequencing of 1,171 elderly admixed individuals from Brazil

As whole-genome sequencing (WGS) becomes the gold standard tool for studying population genomics and medical applications, data on diverse non-European and admixed individuals are still scarce. Here, we present a high-coverage WGS dataset of 1,171 highly admixed elderly Brazilians from a census-based cohort, providing over 76 million variants, of which ~2 million are absent from large public databases. WGS enables identification of ~2,000 previously undescribed mobile element insertions without previous description, nearly 5 Mb of genomic segments absent from the human genome reference, and over 140 alleles from HLA genes absent from public resources. We reclassify and curate pathogenicity assertions for nearly four hundred variants in genes associated with dominantly-inherited Mendelian disorders and calculate the incidence for selected recessive disorders, demonstrating the clinical usefulness of the present study. Finally, we observe that whole-genome and HLA imputation could be significantly improved compared to available datasets since rare variation represents the largest proportion of input from WGS. These results demonstrate that even smaller sample sizes of underrepresented populations bring relevant data for genomic studies, especially when exploring analyses allowed only by WGS