1,036 research outputs found

    The replacement histone H2A.Z in a hyperacetylated form is a feature of active genes in the chicken

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    The replacement histone H2A.Z is variously reported as being linked to gene expression and preventing the spread of heterochromatin in yeast, or concentrated at heterochromatin in mammals. To resolve this apparent dichotomy, affinity-purified antibodies against the N-terminal region of H2A.Z, in both a triacetylatedandnon- acetylatedstate, areusedin native chromatin immmuno-precipitation experiments with mononucleosomes from three chicken cell types. The hyperacetylated species concentrates at the 50 end of active genes, both tissue specific and housekeeping but is absent from inactive genes, while the unacetylated form is absent from both active and inactive genes. A concentration of H2A.Z is also found at insulators under circumstances implying a link to barrier activity but not to enhancer blocking. Although acetylated H2A.Z is widespread throughout the interphase genome, at mitosis its acetylation is erased, the unmodified form remaining. Thus, although H2A.Z may operate as an epigenetic marker for active genes, its N-terminal acetylation does not

    The replacement histone H2A.Z in a hyperacetylated form is a feature of active genes in the chicken

    Get PDF
    The replacement histone H2A.Z is variously reported as being linked to gene expression and preventing the spread of heterochromatin in yeast, or concentrated at heterochromatin in mammals. To resolve this apparent dichotomy, affinity-purified antibodies against the N-terminal region of H2A.Z, in both a triacetylatedandnon- acetylatedstate, areusedin native chromatin immmuno-precipitation experiments with mononucleosomes from three chicken cell types. The hyperacetylated species concentrates at the 50 end of active genes, both tissue specific and housekeeping but is absent from inactive genes, while the unacetylated form is absent from both active and inactive genes. A concentration of H2A.Z is also found at insulators under circumstances implying a link to barrier activity but not to enhancer blocking. Although acetylated H2A.Z is widespread throughout the interphase genome, at mitosis its acetylation is erased, the unmodified form remaining. Thus, although H2A.Z may operate as an epigenetic marker for active genes, its N-terminal acetylation does not

    Transitions between lifetime alcohol use, regular use and remission: Results from the 2004 South African Stress and Health Survey

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    Background. Hazardous alcohol consumption presents a serious threat to the health and wellbeing of all people and is linked to chronic and acute health problems.Objectives. To: (i) estimate the prevalence of alcohol use disorders and remission from alcohol abuse and dependence in the South African (SA) population; and (ii) determine whether age of onset, education, sex and level of cohort alcohol use are associated with commencement of use, regularity of use, and transitions to and remission from more harmful levels of use.Methods. The study was a nationally representative sample of 4 315  individuals aged ≥18 years. In a multistage, area probability sample of adults, data were collected from 4 311 alcohol users using the World Mental Health Survey Initiative version of the Composite International Diagnostic Interview version 3.0. All analyses were carried out using SAS version 9.4.Results. Of the respondents, 40.6% indicated lifetime use of alcohol,  35.3% reported regular use, and 8.8% met diagnostic criteria for alcohol abuse and 2.7% for alcohol dependence. The prevalence of remission from lifetime abuse without dependence was 55.9%. The median age of onset of alcohol use was 20 years, with transition from use to regular use occurring within ~1 - 3 years. The results suggest that males, students (compared with those who had completed a high level of education) and greater  alcohol use in the respondent’s birth cohort were all associated with increased odds of commencing alcohol use. For transitions from use to regular use, increased odds were associated with males, greater birth cohort alcohol use, low education and later (>21 years) onset of first alcohol use.Conclusions. Our findings suggest that cohort alcohol use is associated with transition to commencement of use and from use to regular use in the general SA population. The study further highlighted the need for  interventions among males and university students, given that hazardous alcohol consumption seems to be the most prevalent public health issue encountered by university students and males

    Graviton Propagators on Fuzzy G/H

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    We describe closed string modes by open Wilson lines in noncommutative (NC) gauge theories on compact fuzzy G/H in IIB matrix model. In this construction the world sheet cut-off is related to the spacetime cut-off since the string bit of the symmetric traced Wilson line carries the minimum momentum on G/H. We show that the two point correlation functions of graviton type Wilson lines in 4 dimensional NC gauge theories behave as 1/(momentum)^2. This result suggests that graviton is localized on D3-brane, so we can naturally interpret D3-branes as our universe. Our result is not limited to D3-brane system, and we generalize our analysis to other dimensions and even to any topology of D-brane worldvolume within fuzzy G/H.Comment: 22 pages, 1 figure. minor correction

    The Origin of the Wigner Energy

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    Surfaces of experimental masses of even-even and odd-odd nuclei exhibit a sharp slope discontinuity at N=Z. This cusp (Wigner energy), reflecting an additional binding in nuclei with neutrons and protons occupying the same shell model orbitals, is usually attributed to neutron-proton pairing correlations. A method is developed to extract the Wigner term from experimental data. Both empirical arguments and shell-model calculations suggest that the Wigner term can be traced back to the isospin T=0 part of nuclear interaction. Our calculations reveal the rather complex mechanism responsible for the nuclear binding around the N=Z line. In particular, we find that the Wigner term cannot be solely explained in terms of correlations between the neutron-proton J=1, T=0 (deuteron-like) pairs.Comment: 10 RevTeX pages, 3 Postscript figures include

    An efficient hardware architecture for a neural network activation function generator

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    This paper proposes an efficient hardware architecture for a function generator suitable for an artificial neural network (ANN). A spline-based approximation function is designed that provides a good trade-off between accuracy and silicon area, whilst also being inherently scalable and adaptable for numerous activation functions. This has been achieved by using a minimax polynomial and through optimal placement of the approximating polynomials based on the results of a genetic algorithm. The approximation error of the proposed method compares favourably to all related research in this field. Efficient hardware multiplication circuitry is used in the implementation, which reduces the area overhead and increases the throughput

    Branes as Stable Holomorphic Line Bundles On the Non-Commutative Torus

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    It was recently suggested by A. Kapustin that turning on a BB-field, and allowing some discrepancy between the left and and right-moving complex structures, must induce an identification of B-branes with holomorphic line bundles on a non-commutative complex torus. We translate the stability condition for the branes into this language and identify the stable topological branes with previously proposed non-commutative instanton equations. This involves certain topological identities whose derivation has become familiar in non-commutative field theory. It is crucial for these identities that the instantons are localized. We therefore explore the case of non-constant field strength, whose non-linearities are dealt with thanks to the rank-one Seiberg--Witten map.Comment: 12 pages, LaTe

    Assessment and Optimization of Medical Risks using the Integrated Medical Model

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    ObjectiveDevelop an evidence-based, probabilistic risk forecasting model that can help guide mission planning, requirements development, and align science with engineering technology development

    The High Redshift Integrated Sachs-Wolfe Effect

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    In this paper we rely on the quasar (QSO) catalog of the Sloan Digital Sky Survey Data Release Six (SDSS DR6) of about one million photometrically selected QSOs to compute the Integrated Sachs-Wolfe (ISW) effect at high redshift, aiming at constraining the behavior of the expansion rate and thus the behaviour of dark energy at those epochs. This unique sample significantly extends previous catalogs to higher redshifts while retaining high efficiency in the selection algorithm. We compute the auto-correlation function (ACF) of QSO number density from which we extract the bias and the stellar contamination. We then calculate the cross-correlation function (CCF) between QSO number density and Cosmic Microwave Background (CMB) temperature fluctuations in different subsamples: at high z>1.5 and low z<1.5 redshifts and for two different choices of QSO in a conservative and in a more speculative analysis. We find an overall evidence for a cross-correlation different from zero at the 2.7\sigma level, while this evidence drops to 1.5\sigma at z>1.5. We focus on the capabilities of the ISW to constrain the behaviour of the dark energy component at high redshift both in the \LambdaCDM and Early Dark Energy cosmologies, when the dark energy is substantially unconstrained by observations. At present, the inclusion of the ISW data results in a poor improvement compared to the obtained constraints from other cosmological datasets. We study the capabilities of future high-redshift QSO survey and find that the ISW signal can improve the constraints on the most important cosmological parameters derived from Planck CMB data, including the high redshift dark energy abundance, by a factor \sim 1.5.Comment: 20 pages, 18 figures, and 7 table

    Stringy Derivation of Nahm Construction of Monopoles

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    We derive the Nahm construction of monopoles from exact tachyon condensation on unstable D-branes. The Dirac operator used in the Nahm construction is identified with the tachyon profile in our D-brane approach, and we provide physical interpretation of the procedures Nahm gave. Crucial is the introduction of infinite number of brane-antibranes from which arbitrary D-brane can be constrcuted, exhibitting a unified view of various D-branes. We explicitly show the equivalence of the D3-brane boundary state with the monopole profile and the D1-brane boundary state with the Nahm data as transverse scalars.Comment: 18 pages, 4 eps figures, JHEP style, comments about low energy limits added, references adde
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