700 research outputs found
Symmetry of high-piezoelectric Pb-based complex perovskites at the morphotropic phase boundary I. Neutron diffraction study on Pb(Zn1/3Nb2/3)O3 -9%PbTiO3
The symmetry was examined using neutron diffraction method on
Pb(Zn1/3Nb2/3)O3 -9%PbTiO3 (PZN/9PT) which has a composition at the
morphotropic phase boundary (MPB) between Pb(Zn1/3Nb2/3)O3 and PbTiO3. The
results were compared with those of other specimens with same composition but
with different prehistory. The equilibrium state of all examined specimens is
not the mixture of rhombohedral and tetragonal phases of the end members but
exists in a new polarization rotation line Mc# (orthorhombic-monoclinic line).
Among examined specimens, one exhibited tetragonal symmetry at room temperature
but recovered monoclinic phase after a cooling and heating cycle
Operational reliability assessment of the GEOS A spacecraft
Decision theory application to GEOS A spacecraft operational reliability assessmen
Solution structure of a bacterial microcompartment targeting peptide and its application in the construction of an ethanol bioreactor
Targeting of proteins to bacterial microcompartments (BMCs) is mediated by an 18-amino-acid peptide sequence. Herein, we report the solution structure of the N-terminal targeting peptide (P18) of PduP, the aldehyde dehydrogenase associated with the 1,2-propanediol utilization metabolosome from Citrobacter freundii. The solution structure reveals the peptide to have a well-defined helical conformation along its whole length. Saturation transfer difference and transferred NOE NMR has highlighted the observed interaction surface on the peptide with its main interacting shell protein, PduK. By tagging both a pyruvate decarboxylase and an alcohol dehydrogenase with targeting peptides, it has been possible to direct these enzymes to empty BMCs in vivo and to generate an ethanol bioreactor. Not only are the purified, redesigned BMCs able to transform pyruvate into ethanol efficiently, but the strains containing the modified BMCs produce elevated levels of alcohol
Exact solution of a linear molecular motor model driven by two-step fluctuations and subject to protein friction
We investigate by analytical means the stochastic equations of motion of a
linear molecular motor model based on the concept of protein friction. Solving
the coupled Langevin equations originally proposed by Mogilner et al. (A.
Mogilner et al., Phys. Lett. {\bf 237}, 297 (1998)), and averaging over both
the two-step internal conformational fluctuations and the thermal noise, we
present explicit, analytical expressions for the average motion and the
velocity-force relationship. Our results allow for a direct interpretation of
details of this motor model which are not readily accessible from numerical
solutions. In particular, we find that the model is able to predict
physiologically reasonable values for the load-free motor velocity and the
motor mobility.Comment: 12 pages revtex, 6 eps-figure
Neutron Diffraction Study of Field Cooling Effects on Relaxor Ferroelectrics Pb[(Zn_{1/3} Nb_{2/3})_{0.92} Ti_{0.08}] O_{3}
High-temperature (T) and high-electric-field (E) effects on Pb[(Zn_{1/3}
Nb_{2/3})_{0.92} Ti_{0.08}]O_3 (PZN-8%PT) were studied comprehensively by
neutron diffraction in the ranges 300 <= T <= 550 K and 0 <= E <= 15 kV/cm. We
have focused on how phase transitions depend on preceding thermal and
electrical sequences. In the field cooling process (FC, E parallel [001] >= 0.5
kV/cm), a successive cubic (C) --> tetragonal (T) --> monoclinic (M_C)
transition was observed. In the zero field cooling process (ZFC), however, we
have found that the system does not transform to the rhombohedral (R) phase as
widely believed, but to a new, unidentified phase, which we call X. X gives a
Bragg peak profile similar to that expected for R, but the c-axis is always
slightly shorter than the a-axis. As for field effects on the X phase, we found
an irreversible X --> M_C transition via another monoclinic phase (M_A) as
expected from a previous report [Noheda et al. Phys. Rev. Lett. 86, 3891
(2001)]. At a higher electric field, we confirmed a c-axis jump associated with
the field-induced M_C --> T transition, which was observed by strain and x-ray
diffraction measurements.Comment: 8 pages, 9 figures, revise
A novel mass spectrometry-based assay for GSK-3β activity
BACKGROUND: As a component of the progression from genomic to proteomic analysis, there is a need for accurate assessment of protein post-translational modifications such as phosphorylation. Traditional kinase assays rely heavily on the incorporation of γ-P(32 )radiolabeled isotopes, monoclonal anti-phospho-protein antibodies, or gel shift analysis of substrate proteins. In addition to the expensive and time consuming nature of these methods, the use of radio-ligands imposes restrictions based on the half-life of the radionucleotides and pose potential health risks to researchers. With the shortcomings of traditional assays in mind, the aim of this study was to develop a high throughput, non-radioactive kinase assay for screening Glycogen Synthase Kinase-3beta (GSK-3β) activity. RESULTS: Synthetic peptide substrates designed with a GSK-3β phosphorylation site were assayed with both recombinant enzyme and GSK-3β immunoprecipitated from NIH 3T3 fibroblasts. A molecular weight shift equal to that of a single phosphate group (80 Da.) was detected by surface enhanced laser desorption/ionization time of flight mass spectrometry (SELDI-TOF-MS) in a GSK-3β target peptide (2B-Sp). Not only was there a dose-dependent response in molecular weight shift to the amount of recombinant GSK-3β used in this assay, this shift was also inhibited by lithium chloride (LiCl), in a dose-dependent manner. CONCLUSION: We present here a novel method to sensitively measure peptide phosphorylation by GSK-3β that, due to the incorporation of substrate controls, is applicable to either purified enzyme or cell extracts. Future studies using this method have the potential to elucidate the activity of GSK-3β in vivo, and to screen enzyme activity in relation to a variety of GSK-3β related disorders
Simulating Open Quantum System Dynamics on NISQ Computers with Generalized Quantum Master Equations
We present a quantum algorithm based on the Generalized Quantum Master
Equation (GQME) approach to simulate open quantum system dynamics on noisy
intermediate-scale quantum (NISQ) computers. This approach overcomes the
limitations of the Lindblad equation, which assumes weak system-bath coupling
and Markovity, by providing a rigorous derivation of the equations of motion
for any subset of elements of the reduced density matrix. The memory kernel
resulting from the effect of the remaining degrees of freedom is used as input
to calculate the corresponding non-unitary propagator. We demonstrate how the
Sz.-Nagy dilation theorem can be employed to transform the non-unitary
propagator into a unitary one in a higher-dimensional Hilbert space, which can
then be implemented on quantum circuits of NISQ computers. We validate our
quantum algorithm as applied to the spin-boson benchmark model by analyzing the
impact of the quantum circuit depth on the accuracy of the results when the
subset is limited to the diagonal elements of the reduced density matrix. Our
findings demonstrate that our approach yields reliable results on NISQ IBM
computers.Comment: 47 pages, 10 figures, updated to the most current version of the
manuscrip
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Supplemental Columbia River Protection Activities at the Department of Energy Hanford Site: 2006 Technical Peer Review
Prompted by a $10 million Congressional allocation to identify supplemental actions to protect the Columbia River from groundwater contamination beneath the Hanford Reservation, the U. S. Department of Energy (DOE) Environmental Management (EM) Office of Clean-up Technology identified twenty-three potential technical projects and then down-selected ten of these for further evaluation. An independent expert peer review was conducted for the ten down-selected proposals. The review panel consisted of twenty-three recognized subject matter experts that broadly represented academia, industry, and federal laboratories. Of the initial ten proposals reviewed, one was given unconditional support, six were given conditional support, and three were not supported as proposed. Three additional proposals were then submitted by DOE for review--these proposals were structured, in part, to respond to the initial round of technical peer review comments. Peer reviews of these additional proposals provided conditional support. For those proposals that received conditional support, DOE requested specific implementation and work plans and assessed whether the plans adequately addressed the technical conditions identified by the review panel. The final list of technology proposals receiving support, or conditional support, primarily focused on understanding and reducing the potential impacts of uranium, chromium, and strontium from facilities adjacent to the Columbia River, with a secondary focus on understanding and limiting the future Columbia River impacts from the large carbon tetrachloride groundwater plume underlying and downgradient of the Hanford Central Plateau facilities. The results and recommendations of the peer reviews informed the final DOE project selections and supported implementation of the selected projects to protect the Columbia River and address groundwater contamination at Hanford
The demand for sports and exercise: Results from an illustrative survey
Funding from the Department of Health policy research programme was used in this study.There is a paucity of empirical evidence on the extent to which price and perceived benefits affect the level of participation in sports and exercise. Using an illustrative sample of 60 adults at Brunel University, West London, we investigate the determinants of demand for sports and exercise. The data were collected through face-to-face interviews that covered indicators of sports and exercise behaviour; money/time price and perceived benefits of participation; and socio- economic/demographic details. Count, linear and probit regression models were fitted as appropriate. Seventy eight per cent of the sample participated in sports and exercise and spent an average of £27 per month and an average of 20 min travelling per occasion of sports and exercise. The demand for sport and exercise was negatively associated with time (travel or access time) and ‘variable’ price and positively correlated with ‘fixed’ price. Demand was price inelastic, except in the case of meeting the UK government’s recommended level of participation, which is time price elastic (elasticity = −2.2). The implications of data from a larger nationally representative sample as well as the role of economic incentives in influencing uptake of sports and exercise are discussed.This article is available through the Brunel Open Access Publishing Fund
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