10 research outputs found
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Passive, off-axis convection through the southern flank of the Costa Rica rift
Pore fluids are passively convecting through young oceanic sediments and crust around Deep Sea Drilling Project (DSDP) site 504 on the southern flank of the Costa Rica Rift, as inferred from a variety of geological, geochemical, and geothermal observations. The presence of a fluid circulation system is supported by new data collected on Ocean Drilling Program (ODP) leg 111 and a predrilling survey cruise over the heavily sedimented, 5.9 Ma site; during the latter, elongated heat flow anomalies were mapped subparallel to structural strike, with individual measurements of twice the regional mean value, and strong lateral and vertical geochemical gradients were detected in pore waters squeezed from sediment cores. Also, there is a strong correlation between heat flow, bathymetry, sediment thickness, and inferred fluid velocities up through the sediments. Although the forces which drive passive circulation are not well understood, it has generally been thought that the length scale of heat flow variations provides a good indication of the depth of hydrothermal circulation within the oceanic crust. The widely varied geothermal and hydrogeological observations near site 504 are readily explained by a model which combines (1) basement relief, (2) irregular sediment drape, (3) largely conductive heat transfer through the sediments overlying the crust, and (4) thermal and geochemical homogenization of pore fluids at the sediment/basement interface, which results from (5) topographically induced, passive hydrothermal circulation with large aspect ratio, convection cells. This convection involves mainly the permeable, upper 200-300 m of crust; the deeper crust is not involved
The origin and emergence of life under impact bombardment
Craters formed by asteroids and comets offer a number of possibilities as sites for prebiotic chemistry, and they invite a literal application of Darwin's ‘warm little pond’. Some of these attributes, such as prolonged circulation of heated water, are found in deep-ocean hydrothermal vent systems, previously proposed as sites for prebiotic chemistry. However, impact craters host important characteristics in a single location, which include the formation of diverse metal sulphides, clays and zeolites as secondary hydrothermal minerals (which can act as templates or catalysts for prebiotic syntheses), fracturing of rock during impact (creating a large surface area for reactions), the delivery of iron in the case of the impact of iron-containing meteorites (which might itself act as a substrate for prebiotic reactions), diverse impact energies resulting in different rates of hydrothermal cooling and thus organic syntheses, and the indiscriminate nature of impacts into every available lithology—generating large numbers of ‘experiments’ in the origin of life. Following the evolution of life, craters provide cryptoendolithic and chasmoendolithic habitats, particularly in non-sedimentary lithologies, where limited pore space would otherwise restrict colonization. In impact melt sheets, shattered, mixed rocks ultimately provided diverse geochemical gradients, which in present-day craters support the growth of microbial communities
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The chromatin landscape of healthy and injured cell types in the human kidney
There is a need to define regions of gene activation or repression that control human kidney cells in states of health, injury, and repair to understand the molecular pathogenesis of kidney disease and design therapeutic strategies. Comprehensive integration of gene expression with epigenetic features that define regulatory elements remains a significant challenge. We measure dual single nucleus RNA expression and chromatin accessibility, DNA methylation, and H3K27ac, H3K4me1, H3K4me3, and H3K27me3 histone modifications to decipher the chromatin landscape and gene regulation of the kidney in reference and adaptive injury states. We establish a spatially-anchored epigenomic atlas to define the kidney’s active, silent, and regulatory accessible chromatin regions across the genome. Using this atlas, we note distinct control of adaptive injury in different epithelial cell types. A proximal tubule cell transcription factor network of ELF3, KLF6, and KLF10 regulates the transition between health and injury, while in thick ascending limb cells this transition is regulated by NR2F1. Further, combined perturbation of ELF3, KLF6, and KLF10 distinguishes two adaptive proximal tubular cell subtypes, one of which manifested a repair trajectory after knockout. This atlas will serve as a foundation to facilitate targeted cell-specific therapeutics by reprogramming gene regulatory networks. © 2024, The Author(s).Open access journalThis item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at [email protected]