Mitochondrial fatty acid β-oxidation disorders: from disease to lipidomic studies—a critical review

Fatty acid oxidation disorders (FAODs) are inborn errors of metabolism (IEMs) caused by defects in the fatty acid (FA) mitochondrial β-oxidation. The most common FAODs are characterized by the accumulation of medium-chain FAs and long-chain (3-hydroxy) FAs (and their carnitine derivatives), respectively. These deregulations are associated with lipotoxicity which affects several organs and potentially leads to life-threatening complications and comorbidities. Changes in the lipidome have been associated with several diseases, including some IEMs. In FAODs, the alteration of acylcarnitines (CARs) and FA profiles have been reported in patients and animal models, but changes in polar and neutral lipid profile are still scarcely studied. In this review, we present the main findings on FA and CAR profile changes associated with FAOD pathogenesis, their correlation with oxidative damage, and the consequent disturbance of mitochondrial homeostasis. Moreover, alterations in polar and neutral lipid classes and lipid species identified so far and their possible role in FAODs are discussed. We highlight the need of mass-spectrometry-based lipidomic studies to understand (epi)lipidome remodelling in FAODs, thus allowing to elucidate the pathophysiology and the identification of possible biomarkers for disease prognosis and an evaluation of therapeutic efficacyinfo:eu-repo/semantics/publishedVersio

Heavy metal accumulation in plant species indigenous to a contaminated portuguese site: prospects for phytoremediation

Phytoremediation is a promising alternative to conventional soil clean-up methods; however, up to date, there is still not enough information on plant species suitable for application in this field of science. Therefore, plant screening on contaminated sites can lead to the identification of further species of interest. In the present study, pedological and botanical characteristics of an industrialised area known for its metal contamination, in special with Zn—Esteiro de Estarreja, in Portugal—were examined in a 1-year screening. Twenty-seven species were found, with a higher occurrence and variability in the summer/spring season. Zinc levels in the tissues of the collected plant samples ranged from 34 mg kg−1 in shoots to 2,440 mg kg−1 in roots of different species. Species as Verbascum virgatum, Hypochoeris radicata, Phalaris arundinacea, Conyza bilbaoana, Paspalum urvillei and Aster squamatus have shown high Zn shoot accumulation and bioconcentration factors (BCFshoots > 1) and high metal translocation factors (TF > 1). Others, namely Spergularia capillacea, excluded Zn from the shoot tissues and stored the metal at the root zone (BCFroots > 1), behaving as tolerant plants. Plants were also screened for arbuscular mycorrhizal fungi colonisation, and only few species showed mycorrhizal presence, namely C. bilbaoana, Hirschfeldia incana, Epilobium tetragonum, Conyza sumatrensis, Pteridium aquilinum, P. urvillei and A. squamatus. The present work showed important indigenous species that can cope with installed harsh conditions and with potential for utilisation in phytoremediation strategies, either through metal removal to aerial parts or through its immobilisation in the root zone.info:eu-repo/semantics/acceptedVersio

Plasma phospholipidomic profile differs between children with phenylketonuria and healthy children

Phenylketonuria (PKU) is a disease of the catabolism of phenylalanine (Phe), caused by an impaired function of the enzyme phenylalanine hydroxylase. Therapeutics is based on the restriction of Phe intake, which mostly requires a modification of the diet. Dietary restrictions can lead to imbalances in specific nutrients, including lipids. In the present study, the plasma phospholipidome of PKU and healthy children (CT) was analysed by HILIC-MS/MS and GC-MS. Using this approach, 187 lipid species belonging to 9 different phospholipid classes and 3 ceramides were identified. Principal component analysis of the lipid species dataset showed a distinction between PKU and CT groups. Univariate analysis revealed that 146 species of phospholipids were significantly different between both groups. Lipid species showing significant variation included phosphatidylcholines, containing polyunsaturated fatty acids (PUFA), which were more abundant in PKU. The high level of PUFA-containing lipid species in children with PKU may be related to a diet supplemented with PUFA. This study was the first report comparing the plasma polar lipidome of PKU and healthy children, highlighting that the phospholipidome of PKU children is significantly altered compared to CT. However, further studies with larger cohorts are needed to clarify whether these changes are specific to phenylketonuric children.publishe

The polar lipidome of cultured Emiliania huxleyi: a source of bioactive lipids with relevance for biotechnological applications

Polar lipids from microalgae have aroused greater interest as a natural source of omega-3 (n-3) polyunsaturated fatty acids (PUFA), an alternative to fish, but also as bioactive compounds with multiple applications. The present study aims to characterize the polar lipid profile of cultured microalga Emiliania huxleyi using hydrophilic interaction liquid chromatography coupled with high-resolution mass spectrometry (HILIC-MS) and fatty acids (FA) analysis by gas chromatography (GC-MS). The lipidome of E. huxleyi revealed the presence of distinct n-3 PUFA (40% of total FA), namely docosahexaenoic acid (22:6n-3) and stearidonic acid (18:4n-3), which give this microalga an increased commercial value as a source of n-3 PUFA present in the form of polar lipids. A total of 134 species of polar lipids were identified and some of these species, particularly glycolipids, have already been reported for their bioactive properties. Among betaine lipids, the diacylglyceryl carboxyhydroxymethylcholine (DGCC) class is the least reported in microalgae. For the first time, monomethylphosphatidylethanolamine (MMPE) has been found in the lipidome of E. huxleyi. Overall, this study highlights the potential of E. huxleyi as a sustainable source of high-value polar lipids that can be exploited for different applications, namely human and animal nutrition, cosmetics, and pharmaceuticals.FCT/ FCT/MCTES (Portugal) for the financial support to CICECO (UIDB/50011/2020 and 50011/2020), QOPNA (UID/QUI/00062/2019), LAQV-REQUIMTE (UIDB/50006/2020), CESAM (UIDB/50017/2020 and UIDP/50017/2020), RNEM (LISBOA-01-0145-FEDER-402-022125) and CCMAR: (UIDB/04326/2020).info:eu-repo/semantics/publishedVersio

Dried blood spots in clinical lipidomics: optimization and recent findings

Dried blood spots (DBS) are being considered as an alternative sampling method of blood collection that can be used in combination with lipidomic and other omic analysis. DBS are successfully used in the clinical context to collect samples for newborn screening for the measurement of specifc fatty acid derivatives, such as acylcarnitines, and lipids from whole blood for diagnostic purposes. However, DBS are scarcely used for lipidomic analysis and investigations. Lipidomic stud ies using DBS are starting to emerge as a powerful method for sampling and storage in clinical lipidomic analysis, but the major research work is being done in the pre- and analytical steps and procedures, and few in clinical applications. This review presents a description of the impact factors and variables that can afect DBS lipidomic analysis, such as the type of DBS card, haematocrit, homogeneity of the blood drop, matrix/chromatographic efects, and the chemical and physi cal properties of the analyte. Additionally, a brief overview of lipidomic studies using DBS to unveil their application in clinical scenarios is also presented, considering the studies of method development and validation and, to a less extent, for clinical diagnosis using clinical lipidomics. DBS combined with lipidomic approaches proved to be as efective as whole blood samples, achieving high levels of sensitivity and specifcity during MS and MS/MS analysis, which could be a useful tool for biomarker identifcation. Lipidomic profling using MS/MS platforms enables signifcant insights into physiological changes, which could be useful in precision medicine.info:eu-repo/semantics/publishedVersio

Growth promotional traits of three pgpr: possible uses for phytoremediation of degraded soils

Maize is a fast-growing and high yield crop with both energy value and remediation potential. Plant growth promoting rhizobacteria (PGPR) are a biological tool available to enhance plant establishment in degraded or depleted environments such as the case of saline soils or heavy-metal contaminated land. Although PGPR are able to produce metabolites such as siderophores, HCN and ammonia, or solubilize nutrients such as phosphate, these beneficial traits for the plant may be influenced by exposure to excessive levels of such contaminants. In this study, three PGPR (Pseudomonas fluorescens, Ralstonia eutropha and Cryseobacterium humi) were screened for those traits in the presence of different levels of Cd and Zn, and also to different salinization conditions. Their ability to influence maize germination and root and shoot elongation was also analyzed. Results showed that the level of exposure generally affected the ability of the tested strains to produce plant growth promoting substances. However, dissimilar sensibilities in the behavior of the different strains were observed when exposed to similar stress conditions. These differences were also noticeable in the plant development, with the tested PGPR generally positively influencing the analyzed parameters. Results suggest that PGPR can be exploited to promote stress relief of maize when grown in degraded land. Such knowledge may provide a new insight concerning the advantages of such biotechnologically based tools for phytoremediation.info:eu-repo/semantics/publishedVersio

Rainfall Erosivity: Gap-Filling Method Differences in the Brazilian Pantanal and Cerrado Biomes

To improve the use of soil and its conservation, precipitation data are necessary. With the Universal Soil Loss Equation (USLE), the study of historical precipitation series is a main factor, but in these series, there are gaps that need to be filled. This study had, as a basis, the methods of weighted likelihood, multiple regression, and weighted likelihood based on multiple regression to fill the gaps of the rainfall data for the rainfall gauges in the Brazilian biomes (Cerrado and Pantanal, municipalities of Campo Grande, Bandeirantes, Sidrolândia, Miranda, Fazenda Ponte, and Ribas do Rio Pardo). With this, it became possible to calculate the rainfall erosivity (R factor in the USLE). Therefore, the consistency of the filled rainfall data was analyzed by the double mass method. The value of the rainfall erosivity calculated varies from 2304.80 to 13562.10 MJ mm ha−1 h−1 year. With this data, it was possible to identify particular results that differed from the rainfall erosivity. Comparing all the gap-filling methods, numbers varying from 0–12% at the same rainfall gauge were obtained