10 research outputs found
Effect of magnesium oxide (mgo) addition in diets for lactating holstein cows
Se evaluó el efecto de adición de óxido de magnesio (MgO) en
dietas para vacas Holstein sobre la producción y calidad de la
leche. Diecinueve vacas Holstein en el segundo tercio de lactancia
fueron asignadas a dos tratamientos (T), con 9 y 10 animales.
Ambos tratamientos fueron similares para días de lactancia
y producción de leche. Las vacas fueron asignadas al
azar a dos grupos o tratamientos (T): T1 recibió 0,2%, y T2 recibió
0,4% de MgO. El MgO (agente alcalinizante) se mezcló
con un concentrado comercial y se ofreció en el comedero junto
con la dieta total, la cual consistió de 9 kg/d del concentrado
mas heno de alfalfa ad libitum. La dieta total se ofreció 3 veces
al día (06000, 1200 and 1700 h). El periodo experimental fue
de 30 d, con otros 30 d de adaptación. Se evaluó la producción
de leche (kg/d) y la calidad de la leche (grasa, proteína, y
sólidos totales). Los datos se analizaron por medio del paquete
estadístico SAS en un diseño de bloques al azar. Los animales
en T2 (0,4% MgO) produjeron más leche (2,5 kg/d;
P<0,05) que aquellos en T1 (0,20% MgO). El contenido de
grasa, proteína, y sólidos totales en leche fue más alto
(P<0,05) en T1 que en T2. Se concluye que la adición de
0,40% de MgO en dietas para vacas lactantes incrementa la
producción de leche, sin embargo puede haber una pequeña
reducción en la calidad de la leche, comparado con la suplementación
de 0,20% de [email protected] was evaluated the effect of magnesium oxide (MgO) addition
in diets for Holstein cows on milk production and quality. Nineteen
Holstein cows in second third of lactation were assigned
to two treatments (T), with 9 and 10 animals. Both treatments
were similar for days in lactation and milk yield. Cows were assigned
at random to two treatments (T) groups: T1 received
0.2% and T2 received 0.4% of MgO. The MgO (alkalinizing
agent) was mixed with a commercial concentrate and offered
in feed bunk with total diet, which consisted of 9 kg/d of concentrate
plus alfalfa hay fed ad libitum. Total diet was offered
three times a day (0600; 1200 and 1700 h). The experimental
period was of 30 d, with other 30 for adaptation. Milk production
(kg/d) and milk quality (fat, protein, and total solids) were
evaluated. Data were analyzed using the statistical package
SAS through of a randomized block design. Animals on T2
(0.40% MgO) produced 2.85 kg/d more milk (P<0.50) than
those on T1 (0.20% MgO). The fat, protein and total solids content
in milk were higher (P<0.05) in T1 than in T2. It is concluded
that the addition of 0.4% MgO in diets for lactating dairy
cows resulted in milk production increased, although there was
a small reduction in milk quality, compared with 0.2% MgO
supplementation
INFLUENCE OF TIME BETWEEN RUMINAL GLUCOSE CHALLENGES ON RUMEN FUNCTION
Ruminal lactic acidosis is one of the most important metabolic problems in feedlot cattle. Gradually transitioning cattle to finishing-feedlot diets may reduce the risk for ruminal acidosis by providing sufficient time for adaptation. This adaptation of feedlot cattle to high-concentrate diets may causes marked changes in the ruminal environment, and time is required to establish stable ruminal conditions. However, few studies have evaluated the ruminal adaptation in steers. A metabolism trial was conducted to evaluate the effects of two consecutive glucose challenges on rumen function in steers fed a high-energy finishing diet. Four Holstein steers (320 kg LW) with cannula in the rumen were used in a 4 x 4 Latin square design. Four treatments were used and consisted of the time elapsed between both challenges of glucose (2, 4, 6 or 8 d). Ruminal fluid samples were taken at 0700 h (just prior the first glucose challenge), and from the second challenge (d 2, 4, 6, or 8) at 1 h before and 2, 4, 6, 8, 28, 52, 124, 196 and 268 h. As the time between fluctuation of energy intake increased, ruminal fluid pH (P 0.10). During the first 6 h following the second glucose challenge ruminal fluid pH decreased. No effects of treatments on ruminal pH were observed (P >0.10) among treatments from 3 days after the second challenge. Ruminal fluid osmotic pressure increased (P <0.10) after dosed glucose with all treatments. Ruminal osmolality increased (P <0.10) as the time between challenges were 2 or 4 days. After dosed glucose, total volatile fatty acids increased, except by treatment 1 after second challenge. Total volatile fatty acid and pH were related positively (R2 =0.69). As the time increased, a tendency on increment of concentrations of protozoa was observed. Ruminal glucose concentration decreased linearly (P <0.10) 2 h after the second fluctuation of energy intake. We conclude that ruminal alterations are magnified as the time between glucose challenge decreases
Whole-Exome Sequencing of 24 Spanish Families: Candidate Genes for Non-Syndromic Pediatric Keratoconus
Keratoconus is a corneal dystrophy that is one of the main causes of corneal transplantation and for which there is currently no effective treatment for all patients. The presentation of this disease in pediatric age is associated with rapid progression, a worse prognosis and, in 15–20% of cases, the need for corneal transplantation. It is a multifactorial disease with genetic variability, which makes its genetic study difficult. Discovering new therapeutic targets is necessary to improve the quality of life of patients. In this manuscript, we present the results of whole-exome sequencing (WES) of 24 pediatric families diagnosed at the University Hospital La Paz (HULP) in Madrid. The results show an oligogenic inheritance of the disease. Genes involved in the structure, function, cell adhesion, development and repair pathways of the cornea are proposed as candidate genes for the disease. Further studies are needed to confirm the involvement of the candidate genes described in this article in the development of pediatric keratoconus
Neotropical ornithology: Reckoning with historical assumptions, removing systemic barriers, and reimagining the future
A major barrier to advancing ornithology is the systemic exclusion of professionals from the Global South. A recent special feature, Advances in Neotropical Ornithology, and a shortfalls analysis therein, unintentionally followed a long-standing pattern of highlighting individuals, knowledge, and views from the Global North, while largely omitting the perspectives of people based within the Neotropics. Here, we review current strengths and opportunities in the practice of Neotropical ornithology. Further, we discuss problems with assessing the state of Neotropical ornithology through a northern lens, including discovery narratives, incomplete (and biased) understanding of history and advances, and the promotion of agendas that, while currently popular in the north, may not fit the needs and realities of Neotropical research. We argue that future advances in Neotropical ornithology will critically depend on identifying and addressing the systemic barriers that hold back ornithologists who live and work in the Neotropics: unreliable and limited funding, exclusion from international research leadership, restricted dissemination of knowledge (e.g., through language hegemony and citation bias), and logistical barriers. Moving forward, we must examine and acknowledge the colonial roots of our discipline, and explicitly promote anti-colonial agendas for research, training, and conservation. We invite our colleagues within and beyond the Neotropics to join us in creating new models of governance that establish research priorities with vigorous participation of ornithologists and communities within the Neotropical region. To include a diversity of perspectives, we must systemically address discrimination and bias rooted in the socioeconomic class system, anti-Blackness, anti-Brownness, anti-Indigeneity, misogyny, homophobia, tokenism, and ableism. Instead of seeking individual excellence and rewarding top-down leadership, institutions in the North and South can promote collective leadership. In adopting these approaches, we, ornithologists, will join a community of researchers across academia building new paradigms that can reconcile our relationships and transform science. Spanish and Portuguese translations are available in the Supplementary Material.• Research conducted by ornithologists living and working in Latin America and the Caribbean has been historically and systemically excluded from global scientific paradigms, ultimately holding back ornithology as a discipline.• To avoid replicating systems of exclusion in ornithology, authors, editors, reviewers, journals, scientific societies, and research institutions need to interrupt long-held assumptions, improve research practices, and change policies around funding and publication.• To advance Neotropical ornithology and conserve birds across the Americas, institutions should invest directly in basic field biology research, reward collective leadership, and strengthen funding and professional development opportunities for people affected by current research policies.Peer reviewe
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GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19
Data availability: Downloadable summary data are available through the GenOMICC data site (https://genomicc.org/data). Summary statistics are available, but without the 23andMe summary statistics, except for the 10,000 most significant hits, for which full summary statistics are available. The full GWAS summary statistics for the 23andMe discovery dataset will be made available through 23andMe to qualified researchers under an agreement with 23andMe that protects the privacy of the 23andMe participants. For further information and to apply for access to the data, see the 23andMe website (https://research.23andMe.com/dataset-access/). All individual-level genotype and whole-genome sequencing data (for both academic and commercial uses) can be accessed through the UKRI/HDR UK Outbreak Data Analysis Platform (https://odap.ac.uk). A restricted dataset for a subset of GenOMICC participants is also available through the Genomics England data service. Monocyte RNA-seq data are available under the title ‘Monocyte gene expression data’ within the Oxford University Research Archives (https://doi.org/10.5287/ora-ko7q2nq66). Sequencing data will be made freely available to organizations and researchers to conduct research in accordance with the UK Policy Framework for Health and Social Care Research through a data access agreement. Sequencing data have been deposited at the European Genome–Phenome Archive (EGA), which is hosted by the EBI and the CRG, under accession number EGAS00001007111.Extended data figures and tables are available online at https://www.nature.com/articles/s41586-023-06034-3#Sec21 .Supplementary information is available online at https://www.nature.com/articles/s41586-023-06034-3#Sec22 .Code availability:
Code to calculate the imputation of P values on the basis of SNPs in linkage disequilibrium is available at GitHub (https://github.com/baillielab/GenOMICC_GWAS).Acknowledgements: We thank the members of the Banco Nacional de ADN and the GRA@CE cohort group; and the research participants and employees of 23andMe for making this work possible. A full list of contributors who have provided data that were collated in the HGI project, including previous iterations, is available online (https://www.covid19hg.org/acknowledgements).Change history: 11 July 2023: A Correction to this paper has been published at: https://doi.org/10.1038/s41586-023-06383-z. -- In the version of this article initially published, the name of Ana Margarita Baldión-Elorza, of the SCOURGE Consortium, appeared incorrectly (as Ana María Baldion) and has now been amended in the HTML and PDF versions of the article.Copyright © The Author(s) 2023, Critical illness in COVID-19 is an extreme and clinically homogeneous disease phenotype that we have previously shown1 to be highly efficient for discovery of genetic associations2. Despite the advanced stage of illness at presentation, we have shown that host genetics in patients who are critically ill with COVID-19 can identify immunomodulatory therapies with strong beneficial effects in this group3. Here we analyse 24,202 cases of COVID-19 with critical illness comprising a combination of microarray genotype and whole-genome sequencing data from cases of critical illness in the international GenOMICC (11,440 cases) study, combined with other studies recruiting hospitalized patients with a strong focus on severe and critical disease: ISARIC4C (676 cases) and the SCOURGE consortium (5,934 cases). To put these results in the context of existing work, we conduct a meta-analysis of the new GenOMICC genome-wide association study (GWAS) results with previously published data. We find 49 genome-wide significant associations, of which 16 have not been reported previously. To investigate the therapeutic implications of these findings, we infer the structural consequences of protein-coding variants, and combine our GWAS results with gene expression data using a monocyte transcriptome-wide association study (TWAS) model, as well as gene and protein expression using Mendelian randomization. We identify potentially druggable targets in multiple systems, including inflammatory signalling (JAK1), monocyte–macrophage activation and endothelial permeability (PDE4A), immunometabolism (SLC2A5 and AK5), and host factors required for viral entry and replication (TMPRSS2 and RAB2A).GenOMICC was funded by Sepsis Research (the Fiona Elizabeth Agnew Trust), the Intensive Care Society, a Wellcome Trust Senior Research Fellowship (to J.K.B., 223164/Z/21/Z), the Department of Health and Social Care (DHSC), Illumina, LifeArc, the Medical Research Council, UKRI, a BBSRC Institute Program Support Grant to the Roslin Institute (BBS/E/D/20002172, BBS/E/D/10002070 and BBS/E/D/30002275) and UKRI grants MC_PC_20004, MC_PC_19025, MC_PC_1905 and MRNO2995X/1. A.D.B. acknowledges funding from the Wellcome PhD training fellowship for clinicians (204979/Z/16/Z), the Edinburgh Clinical Academic Track (ECAT) programme. This research is supported in part by the Data and Connectivity National Core Study, led by Health Data Research UK in partnership with the Office for National Statistics and funded by UK Research and Innovation (grant MC_PC_20029). Laboratory work was funded by a Wellcome Intermediate Clinical Fellowship to B.F. (201488/Z/16/Z). We acknowledge the staff at NHS Digital, Public Health England and the Intensive Care National Audit and Research Centre who provided clinical data on the participants; and the National Institute for Healthcare Research Clinical Research Network (NIHR CRN) and the Chief Scientist’s Office (Scotland), who facilitate recruitment into research studies in NHS hospitals, and to the global ISARIC and InFACT consortia. GenOMICC genotype controls were obtained using UK Biobank Resource under project 788 funded by Roslin Institute Strategic Programme Grants from the BBSRC (BBS/E/D/10002070 and BBS/E/D/30002275) and Health Data Research UK (HDR-9004 and HDR-9003). UK Biobank data were used in the GSMR analyses presented here under project 66982. The UK Biobank was established by the Wellcome Trust medical charity, Medical Research Council, Department of Health, Scottish Government and the Northwest Regional Development Agency. It has also had funding from the Welsh Assembly Government, British Heart Foundation and Diabetes UK. The work of L.K. was supported by an RCUK Innovation Fellowship from the National Productivity Investment Fund (MR/R026408/1). J.Y. is supported by the Westlake Education Foundation. SCOURGE is funded by the Instituto de Salud Carlos III (COV20_00622 to A.C., PI20/00876 to C.F.), European Union (ERDF) ‘A way of making Europe’, Fundación Amancio Ortega, Banco de Santander (to A.C.), Cabildo Insular de Tenerife (CGIEU0000219140 ‘Apuestas científicas del ITER para colaborar en la lucha contra la COVID-19’ to C.F.) and Fundación Canaria Instituto de Investigación Sanitaria de Canarias (PIFIISC20/57 to C.F.). We also acknowledge the contribution of the Centro National de Genotipado (CEGEN) and Centro de Supercomputación de Galicia (CESGA) for funding this project by providing supercomputing infrastructures. A.D.L. is a recipient of fellowships from the National Council for Scientific and Technological Development (CNPq)-Brazil (309173/2019-1 and 201527/2020-0)
Freeze-out radii extracted from three-pion cumulants in pp, p–Pb and Pb–Pb collisions at the LHC
In high-energy collisions, the spatio-temporal size of the particle production region can be measured using the Bose-Einstein correlations of identical bosons at low relative momentum. The source radii are typically extracted using two-pion correlations, and characterize the system at the last stage of interaction, called kinetic freeze-out. In low-multiplicity collisions, unlike in high-multiplicity collisions, two-pion correlations are substantially altered by background correlations, e.g. mini-jets. Such correlations can be suppressed using three-pion cumulant correlations. We present the first measurements of the size of the system at freeze-out extracted from three-pion cumulant correlations in pp, p-Pb and Pb-Pb collisions at the LHC with ALICE. At similar multiplicity, the invariant radii extracted in p-Pb collisions are found to be 5-15% larger than those in pp, while those in Pb-Pb are 35-55% larger than those in p-Pb. Our measurements disfavor models which incorporate substantially stronger collective expansion in p-Pb as compared to pp collisions at similar multiplicity