Internal fluid mechanics research on supercomputers for aerospace propulsion systems

The Internal Fluid Mechanics Division of the NASA Lewis Research Center is combining the key elements of computational fluid dynamics, aerothermodynamic experiments, and advanced computational technology to bring internal computational fluid mechanics (ICFM) to a state of practical application for aerospace propulsion systems. The strategies used to achieve this goal are to: (1) pursue an understanding of flow physics, surface heat transfer, and combustion via analysis and fundamental experiments, (2) incorporate improved understanding of these phenomena into verified 3-D CFD codes, and (3) utilize state-of-the-art computational technology to enhance experimental and CFD research. Presented is an overview of the ICFM program in high-speed propulsion, including work in inlets, turbomachinery, and chemical reacting flows. Ongoing efforts to integrate new computer technologies, such as parallel computing and artificial intelligence, into high-speed aeropropulsion research are described

The niche party concept and its measurement

The concept of the niche party has become increasingly popular in analyses of party competition. Yet, existing approaches vary in their definitions and their measurement approaches. We propose using a minimal definition that allows us to compare political parties in terms of their ‘nicheness’. We argue that the conceptual core of the niche party concept is based on issue emphasis and that a niche party emphasizes policy areas neglected by its rivals. Based on this definition, we propose a continuous measure that allows for more fine-grained measurement of a party’s ‘nicheness’ than the dominant, dichotomous approaches and thereby limits the risk of measurement error. Drawing on data collected by the Comparative Manifesto Project, we show that (1) our measure has high face validity and (2) exposes differences among parties that are not captured by alternative, static or dichotomous measures

Quantitative bedrock geology of east and Southeast Asia (Brunei, Cambodia, eastern and southeastern China, East Timor, Indonesia, Japan, Laos, Malaysia, Myanmar, North Korea, Papua New Guinea, Philippines, far-eastern Russia, Singapore, South Korea, Taiwan, Thailand, Vietnam)

Author Posting. © American Geophysical Union, 2004. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 5 (2004): Q01B06, doi:10.1029/2003GC000619.We quantitatively analyze the area-age distribution of sedimentary, igneous and metamorphic bedrock based on data from the most recent digital geologic maps of East and Southeast Asia (Coordinating Committee for Coastal and Offshore Geosciences Programmes in East and Southeast Asia (CCOP) and the Geologic Survey of Japan, 1997; 1:2,000,000), published as Digital Geoscience Map G-2 by the Geological Survey of Japan. Sedimentary rocks, volcanic rocks, plutonic rocks, ultramafic rocks and metamorphic rocks cover 73.3%, 8.5%, 8.8%, 0.9%, and 8.6% of the surface area, respectively. The average ages of major lithologic units, weighted according to bedrock area, are as follows: sedimentary rocks (average stratigraphic age of 123 Myr/median age of 26 Myr), volcanic rocks (84 Myr/20 Myr), intrusive rocks (278 Myr/195 Myr), ultramafic rocks (unknown) and metamorphic rocks (1465 Myr/1118 Myr). The variability in lithologic composition and age structure of individual countries reflects the complex tectonic makeup of this region that ranges from Precambrian cratons (e.g., northeast China and North Korea) to Mesozoic-Cenozoic active margins (e.g., Japan, the Philippines, Indonesia and New Guinea). The spatial resolution of the data varies from 44 km2 per polygon (Japan) to 1659 km2 per polygon (Taiwan) and is, on average (490 km2/polygon), similar to our previous analyses of the United States of America and Canada. The temporal and spatial resolution is sufficiently high to perform age-area analyses of individual river basins larger than ∼10,000 km2 and to quantitatively evaluate the relationship between bedrock geology and river chemistry. As many rivers draining tropical, mountainous islands of East and Southeast Asia have a disproportionate effect on the dissolved and particulate load delivered to the world oceans, bedrock geology in such river drainage basins disproportionately affect ocean chemistry.Financial support was provided through the U.S. National Science Foundation (NSF-EAR-0125873) to BPE

Quantitative bedrock geology of the continents and large-scale drainage regions

Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 8 (2007): Q06009, doi:10.1029/2006GC001544.We quantitatively analyze the area-age distribution of sedimentary, extrusive volcanic, and endogenous (plutonic and/or metamorphic) bedrock on the basis of data from the most recent digital Geological Map of the World at a scale of 1:25,000,000. The spatial resolution of the digital bedrock data averages 13,905 km2 per polygon. Comparison of certain regions of the world, previously analyzed at higher spatial resolution, with the low-resolution world data reveals general consistency in the areal exposure of major rock types as well as a minor systematic bias toward older average bedrock ages in the global data set. Application of the global bedrock data to 19 large-scale drainage regions and three large, internally drained regions reveals considerable regional variability of Earth's bedrock geology that is consistent with the dominant geotectonic setting of the respective drainage region.B.P.E. acknowledges financial support from the United States National Science Foundation (NSF-EAR- 0125873) and from the Woods Hole Oceanographic Institution

Human autoantibodies against the 54 kDa protein of the signal recognition particle block function at multiple stages.

RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/about/license which is similar to the 'Creative Commons Attribution Licence'. In brief you may : copy, distribute, and display the work; make derivative works; or make commercial use of the work - under the following conditions: the original author must be given credit; for any reuse or distribution, it must be made clear to others what the license terms of this work are.The 54 kDa subunit of the signal recognition particle (SRP54) binds to the signal sequences of nascent secretory and membrane proteins and it contributes to the targeting of these precursors to the membrane of the endoplasmic reticulum (ER). At the ER membrane, the binding of the signal recognition particle (SRP) to its receptor triggers the release of SRP54 from its bound signal sequence and the nascent polypeptide is transferred to the Sec61 translocon for insertion into, or translocation across, the ER membrane. In the current article, we have characterized the specificity of anti-SRP54 autoantibodies, which are highly characteristic of polymyositis patients, and investigated the effect of these autoantibodies on the SRP function in vitro. We found that the anti-SRP54 autoantibodies had a pronounced and specific inhibitory effect upon the translocation of the secretory protein preprolactin when analysed using a cell-free system. Our mapping studies showed that the anti-SRP54 autoantibodies bind to the amino-terminal SRP54 N-domain and to the central SRP54 G-domain, but do not bind to the carboxy-terminal M-domain that is known to bind ER signal sequences. Nevertheless, anti-SRP54 autoantibodies interfere with signal-sequence binding to SRP54, most probably by steric hindrance. When the effect of anti-SRP autoantibodies on protein targeting the ER membrane was further investigated, we found that the autoantibodies prevent the SRP receptor-mediated release of ER signal sequences from the SRP54 subunit. This observation supports a model where the binding of the homologous GTPase domains of SRP54 and the alpha-subunit of the SRP receptor to each other regulates the release of ER signal sequences from the SRP54 M-domain

Expression of Liver Phenotypes in Cultured Mouse Hepatoma Cells

Mouse hepatoma cells were established in vitro as a permanently growing line designated Hepa. The mass population and a subclone were characterized for their karyotype and their retention of liver-specific properties. An examination of 17 hepatic traits revealed that the cell lines secreted several serum proteins. The activities of a number of liver-specific enzymes, however, appeared to be absent in these cells. The identification of differentiated properties of cultured hepatoma cells permits the use of these lines in a variety of studies such as cell hybridization, biochemical analysis of tissue-specific gene products, and the modulation of expression of genes governing differentiated phenotypes. This report presents the analysis of a broad spectrum of characteristics and thereby describes one of the most fully defined hepatoma cell lines of murine origin in the literatur

Early Continence and Extravasation After Open Retropubic Radical Prostatectomy – Interrupted vs Continuous Suturing for Vesicourethral Anastomosis

Purpose: To compare running suture (RS) and interrupted suture (IS) of vesicourethral anastomosis (VUA) during open retropubic radical prostatectomy (RRP) on early urinary continence and extravasation. Patients and methods: Single center analysis of 211 patients who underwent RRP performed by a single surgeon during 2008 to 2017 was retrospectively analyzed. For VUA, we used the standard interrupted suture technique (n=100) with a 3-0 PDS suture. The RS (n=111) was performed with 12-bite suture using 3-0 PDS. The primary endpoints were extravasation and early continence. Demographic and peri-operative data were collected and analyzed using Pearson's chi-square, t-Test and Mann-Whitney U-test. A binary logistic regression analysis was carried out to explore predictors that affected early continence after catheter removal. Results: The rates of early urinary incontinence (UI) were 7.7% vs 42.2% (p<0.001). The duration of catheterization and hospitalization was significantly shorter in the interrupted group (4 days vs 5 days, p<0.001 and 5 days vs 6 days, p<0.001). The groups did not differ significantly in body mass index or prostate volume. There were older patients and higher PSA levels in the group with RS technique. No significant difference was found in the postoperative extravasation rates between both groups (13.5% vs 12%, p=0.742). Conclusion: Running vesicourethral anastomosis increased the rate of early urinary incontinence. Both anastomosis techniques provided a similar rate of postoperative urine extravasation. VUA should only be one of the many criteria that must be considered for the preservation of urinary continence of patients after RRP

BiGG Models: A platform for integrating, standardizing and sharing genome-scale models

Genome-scale metabolic models are mathematically-structured knowledge bases that can be used to predict metabolic pathway usage and growth phenotypes. Furthermore, they can generate and test hypotheses when integrated with experimental data. To maximize the value of these models, centralized repositories of high-quality models must be established, models must adhere to established standards and model components must be linked to relevant databases. Tools for model visualization further enhance their utility. To meet these needs, we present BiGG Models (http://bigg.ucsd.edu), a completely redesigned Biochemical, Genetic and Genomic knowledge base. BiGG Models contains more than 75 high-quality, manually-curated genome-scale metabolic models. On the website, users can browse, search and visualize models. BiGG Models connects genome-scale models to genome annotations and external databases. Reaction and metabolite identifiers have been standardized across models to conform to community standards and enable rapid comparison across models. Furthermore, BiGG Models provides a comprehensive application programming interface for accessing BiGG Models with modeling and analysis tools. As a resource for highly curated, standardized and accessible models of metabolism, BiGG Models will facilitate diverse systems biology studies and support knowledge-based analysis of diverse experimental data