Berry phases in superconducting transitions

I generalize the concept of Berry's geometrical phase for quasicyclic Hamiltonians to the case in which the ground state evolves adiabatically to an excited state after one cycle, but returns to the ground state after an integer number of cycles. This allows to extend the charge Berry phase gamma_c related to the macroscopic polarization, to many-body systems with fractional number of particles per site. Under certain conditions, gamma_c and the spin Berry phase gamma_s jump in pi at the boundary of superconducting phases. In the extended Hubbard chain with on-site attraction U and nearest-neighbor interaction V at quarter filling, the transitions detected agree very well with exact results in two limits solved by the Bethe ansatz, and with previous numerical studies. In chains with spin SU(2) symmetry, gamma_s jumps when a spin gap opens.Comment: 5 pages, 3 figures, accepted in Europhys. Let

A spatial scan statistic for zero-inflated Poisson process

The scan statistic is widely used in spatial cluster detection applications of inhomogeneous Poisson processes. However, real data may present substantial departure from the underlying Poisson process. One of the possible departures has to do with zero excess. Some studies point out that when applied to data with excess zeros, the spatial scan statistic may produce biased inferences. In this work, we develop a closed-form scan statistic for cluster detection of spatial zero-inflated count data. We apply our methodology to simulated and real data. Our simulations revealed that the Scan-Poisson statistic steadily deteriorates as the number of zeros increases, producing biased inferences. On the other hand, our proposed Scan-ZIP and Scan-ZIP+EM statistics are, most of the time, either superior or comparable to the Scan-Poisson statistic

Linkage disequilibrium in natural populations of Trypanosoma cruzi (flagellate), the agent of Chagas's disease

We have studied linkage disequilibrium in natural populations of Trypanosoma cruzi, the agent of Chagas' disease, by analyzing (i) a set of 524 stocks from the whole geographical range of the parasite, characterized at four gene loci coding for enzymes; (ii) a subsample of 121 stocks characterized at 12 enzyme loci; and (iii) a subset of 386 stocks from six locations in Bolivia, characterized by four enzyme loci. Our results show that the linkage disequilibrium reaches the maximum possible value, given the observed allelic frequencies, for almost all the locus pairs. This result is most consistent with the hypothesis that genetic recombination is absent or very rare in T. cruzi natural populations. Partition of the linkage disequilibrium variance for the six Bolivian populations shows that both inter- and intrapopulation components are substantial and that the relationships among the components are D2IS less than D2ST, and D'2IS less than D'2ST. These inequalities are interpreted as the result of an interplay between genetic drift, rare or absent mating, and clonal selection in generating linkage disequilibrium in T. cruzi populations

Temperature in nonequilibrium systems with conserved energy

We study a class of nonequilibrium lattice models which describe local redistributions of a globally conserved energy. A particular subclass can be solved analytically, allowing to define a temperature T_{th} along the same lines as in the equilibrium microcanonical ensemble. The fluctuation-dissipation relation is explicitely found to be linear, but its slope differs from the inverse temperature T_{th}^{-1}. A numerical renormalization group procedure suggests that, at a coarse-grained level, all models behave similarly, leading to a two-parameter description of their macroscopic properties.Comment: 4 pages, 1 figure, final versio

Targeting Oxidative Stress and Aberrant Critical Period Plasticity in the Developmental Trajectory to Schizophrenia

Schizophrenia is a neurodevelopmental disorder reflecting a convergence of genetic risk and early life stress. The slow progression to first psychotic episode represents both a window of vulnerability as well as opportunity for therapeutic intervention. Here, we consider recent neurobiological insight into the cellular and molecular components of developmental critical periods and their vulnerability to redox dysregulation. In particular, the consistent loss of parvalbumin-positive interneuron (PVI) function and their surrounding perineuronal nets (PNNs) as well as myelination in patient brains is consistent with a delayed or extended period of circuit instability. This linkage to critical period triggers (PVI) and brakes (PNN, myelin) implicates mistimed trajectories of brain development in mental illness. Strategically introduced antioxidant treatment or later reinforcement of molecular brakes may then offer a novel prophylactic psychiatr

Computation of dynamical correlation functions of Heisenberg chains in a field

We compute the momentum- and frequency-dependent longitudinal spin structure factor for the one-dimensional spin-1/2 $XXZ$ Heisenberg spin chain in a magnetic field, using exact determinant representations for form factors on the lattice. Multiparticle contributions are computed numerically throughout the Brillouin zone, yielding saturation of the sum rule to high precision.Comment: 4 pages, 14 figure